RNA–Protein interactions for RNA: ENST00000266085.6

TIMP3-201, Transcript of TIMP metallopeptidase inhibitor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TIMP3, Length 4,603 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TIMP3-201ENST00000266085 AIFM2Q9BRQ8 373 aa14.24□□□□□ -0.13
TIMP3-201ENST00000266085 THAP7Q9BT49 309 aaPredicted RBP14.24□□□□□ -0.13
TIMP3-201ENST00000266085 TCEAL2Q9H3H9 227 aaPredicted RBP14.24□□□□□ -0.13
TIMP3-201ENST00000266085 PIGBOS1A0A0B4J2F0 54 aa14.24□□□□□ -0.13
TIMP3-201ENST00000266085 NAP1L6A6NFF2 107 aa14.24□□□□□ -0.13
TIMP3-201ENST00000266085 MEN1O00255 615 aa14.24□□□□□ -0.13
TIMP3-201ENST00000266085 AGTR1P30556 359 aa14.24□□□□□ -0.13
TIMP3-201ENST00000266085 MECP2P51608 486 aaKnown RBP14.24□□□□□ -0.13
TIMP3-201ENST00000266085 COL28A1Q2UY09 1125 aa14.24□□□□□ -0.13
TIMP3-201ENST00000266085 ARSKQ6UWY0 536 aa14.24□□□□□ -0.13
TIMP3-201ENST00000266085 SLC35D2Q76EJ3 337 aa14.24□□□□□ -0.13
TIMP3-201ENST00000266085 SIMC1Q8NDZ2 872 aa14.24□□□□□ -0.13
TIMP3-201ENST00000266085 NECAB3Q96P71 396 aaPredicted RBP14.24□□□□□ -0.13
TIMP3-201ENST00000266085 SPAG17Q6Q759 2223 aa14.23□□□□□ -0.13
TIMP3-201ENST00000266085 MAKP20794 623 aa14.23□□□□□ -0.13
TIMP3-201ENST00000266085 LSSP48449 732 aa14.23□□□□□ -0.13
TIMP3-201ENST00000266085 SIRPAP78324 504 aa14.23□□□□□ -0.13
TIMP3-201ENST00000266085 BTG2P78543 158 aa14.23□□□□□ -0.13
TIMP3-201ENST00000266085 FOXRED1Q96CU9 486 aaPredicted RBP14.23□□□□□ -0.13
TIMP3-201ENST00000266085 DIMT1Q9UNQ2 313 aaKnown RBP14.23□□□□□ -0.13
TIMP3-201ENST00000266085 CROCCQ5TZA2 2017 aa14.23□□□□□ -0.13
TIMP3-201ENST00000266085 IRF2P14316 349 aa14.23□□□□□ -0.13
TIMP3-201ENST00000266085 EIF1P41567 113 aaKnown RBP14.23□□□□□ -0.13
TIMP3-201ENST00000266085 SLC26A5P58743 744 aa14.23□□□□□ -0.13
TIMP3-201ENST00000266085 FGL1Q08830 312 aa14.23□□□□□ -0.13
TIMP3-201ENST00000266085 P2RY14Q15391 338 aa14.23□□□□□ -0.13
TIMP3-201ENST00000266085 SLC22A6Q4U2R8 563 aa14.23□□□□□ -0.13
TIMP3-201ENST00000266085 FAM76BQ5HYJ3 339 aa14.23□□□□□ -0.13
TIMP3-201ENST00000266085 DPY19L2P2Q6ZN68 376 aa14.23□□□□□ -0.13
TIMP3-201ENST00000266085 ZNF836Q6ZNA1 936 aa14.23□□□□□ -0.13
TIMP3-201ENST00000266085 LRRC69Q6ZNQ3 347 aa14.23□□□□□ -0.13
TIMP3-201ENST00000266085 ESX1Q8N693 406 aa14.23□□□□□ -0.13
TIMP3-201ENST00000266085 SYNPRQ8TBG9 265 aa14.23□□□□□ -0.13
TIMP3-201ENST00000266085 SUN5Q8TC36 379 aa14.23□□□□□ -0.13
TIMP3-201ENST00000266085 SLC35A4Q96G79 324 aa14.23□□□□□ -0.13
TIMP3-201ENST00000266085 ZNF419Q96HQ0 510 aaPredicted RBP14.23□□□□□ -0.13
TIMP3-201ENST00000266085 C1orf198Q9H425 327 aa14.23□□□□□ -0.13
TIMP3-201ENST00000266085 FAIMQ9NVQ4 179 aa14.23□□□□□ -0.13
TIMP3-201ENST00000266085 DOCK5Q9H7D0 1870 aa14.23□□□□□ -0.13
TIMP3-201ENST00000266085 A6NIN4 97 aa14.23□□□□□ -0.13
TIMP3-201ENST00000266085 A8MVM7 634 aa14.23□□□□□ -0.13
TIMP3-201ENST00000266085 ZNF736B4DX44 427 aaPredicted RBP14.23□□□□□ -0.13
TIMP3-201ENST00000266085 ZNF593O00488 134 aaPredicted RBP14.23□□□□□ -0.13
TIMP3-201ENST00000266085 HPGDSO60760 199 aa14.23□□□□□ -0.13
TIMP3-201ENST00000266085 MYF5P13349 255 aa14.23□□□□□ -0.13
TIMP3-201ENST00000266085 TRIM23P36406 574 aa14.23□□□□□ -0.13
TIMP3-201ENST00000266085 RRADP55042 308 aa14.23□□□□□ -0.13
TIMP3-201ENST00000266085 ADARB1P78563 741 aaKnown RBP14.23□□□□□ -0.13
TIMP3-201ENST00000266085 SF3A2Q15428 464 aaKnown RBP14.23□□□□□ -0.13
TIMP3-201ENST00000266085 PLK5Q496M5 336 aa14.23□□□□□ -0.13
TIMP3-201ENST00000266085 C9orf135Q5VTT2 229 aa14.23□□□□□ -0.13
TIMP3-201ENST00000266085 YOD1Q5VVQ6 348 aaPredicted RBP14.23□□□□□ -0.13
TIMP3-201ENST00000266085 FER1L6-AS2Q96M78 137 aa14.23□□□□□ -0.13
TIMP3-201ENST00000266085 NXF5Q9H1B4 397 aaKnown RBP14.23□□□□□ -0.13
TIMP3-201ENST00000266085 PLEKHJ1Q9NW61 149 aa14.23□□□□□ -0.13
TIMP3-201ENST00000266085 SH3BGRL2Q9UJC5 107 aa14.23□□□□□ -0.13
TIMP3-201ENST00000266085 WIF1Q9Y5W5 379 aa14.23□□□□□ -0.13
TIMP3-201ENST00000266085 EEF1E1-BLOC1S5C9J1V9 151 aa14.22□□□□□ -0.13
TIMP3-201ENST00000266085 MBTPS2O43462 519 aa14.22□□□□□ -0.13
TIMP3-201ENST00000266085 FCMRO60667 390 aa14.22□□□□□ -0.13
TIMP3-201ENST00000266085 THBS1P07996 1170 aa14.22□□□□□ -0.13
TIMP3-201ENST00000266085 SPOCK1Q08629 439 aa14.22□□□□□ -0.13
TIMP3-201ENST00000266085 OR2T35Q8NGX2 323 aa14.22□□□□□ -0.13
TIMP3-201ENST00000266085 ACER3Q9NUN7 267 aa14.22□□□□□ -0.13
TIMP3-201ENST00000266085 TAS2R16Q9NYV7 291 aa14.22□□□□□ -0.13
TIMP3-201ENST00000266085 LRRC37AA6NMS7 1700 aa14.22□□□□□ -0.13
TIMP3-201ENST00000266085 ZNF831Q5JPB2 1677 aa14.22□□□□□ -0.13
TIMP3-201ENST00000266085 HTR1FP30939 366 aa14.22□□□□□ -0.13
TIMP3-201ENST00000266085 SLC35A1P78382 337 aa14.22□□□□□ -0.13
TIMP3-201ENST00000266085 MLC1Q15049 377 aa14.22□□□□□ -0.13
TIMP3-201ENST00000266085 ZNF709Q8N972 641 aa14.22□□□□□ -0.13
TIMP3-201ENST00000266085 GHSRQ92847 366 aa14.22□□□□□ -0.13
TIMP3-201ENST00000266085 C7orf34Q96L11 122 aa14.22□□□□□ -0.13
TIMP3-201ENST00000266085 HYLS1Q96M11 299 aa14.22□□□□□ -0.13
TIMP3-201ENST00000266085 ATP13A2Q9NQ11 1180 aa14.22□□□□□ -0.13
TIMP3-201ENST00000266085 QSER1Q2KHR3 1735 aa14.22□□□□□ -0.13
TIMP3-201ENST00000266085 DLEC1Q9Y238 1755 aa14.22□□□□□ -0.13
TIMP3-201ENST00000266085 TSPAN11A1L157 253 aa14.22□□□□□ -0.13
TIMP3-201ENST00000266085 FUOMA2VDF0 154 aa14.22□□□□□ -0.13
TIMP3-201ENST00000266085 TSPAN4O14817 238 aa14.22□□□□□ -0.13
TIMP3-201ENST00000266085 CSF1P09603 554 aa14.22□□□□□ -0.13
TIMP3-201ENST00000266085 CD22P20273 847 aa14.22□□□□□ -0.13
TIMP3-201ENST00000266085 DRD3P35462 400 aa14.22□□□□□ -0.13
TIMP3-201ENST00000266085 CAMK2DQ13557 499 aa14.22□□□□□ -0.13
TIMP3-201ENST00000266085 FAM69AQ5T7M9 428 aa14.22□□□□□ -0.13
TIMP3-201ENST00000266085 TMEM53Q6P2H8 277 aa14.22□□□□□ -0.13
TIMP3-201ENST00000266085 TMEM92Q6UXU6 159 aa14.22□□□□□ -0.13
TIMP3-201ENST00000266085 CAMKMTQ7Z624 323 aa14.22□□□□□ -0.13
TIMP3-201ENST00000266085 NKAIN4Q8IVV8 208 aa14.22□□□□□ -0.13
TIMP3-201ENST00000266085 SFTPA1Q8IWL2 248 aa14.22□□□□□ -0.13
TIMP3-201ENST00000266085 TSLPQ969D9 159 aa14.22□□□□□ -0.13
TIMP3-201ENST00000266085 LRRC61Q9BV99 259 aa14.22□□□□□ -0.13
TIMP3-201ENST00000266085 SNX11Q9Y5W9 270 aa14.22□□□□□ -0.13
TIMP3-201ENST00000266085 CACNG2Q9Y698 323 aa14.22□□□□□ -0.13
TIMP3-201ENST00000266085 A0A087WUU8 490 aa14.22□□□□□ -0.13
TIMP3-201ENST00000266085 FAM230AA0A1W2PPH8 454 aa14.22□□□□□ -0.13
TIMP3-201ENST00000266085 SOCS6O14544 535 aa14.22□□□□□ -0.13
TIMP3-201ENST00000266085 SCG5P05408 212 aa14.22□□□□□ -0.13
TIMP3-201ENST00000266085 GCH1P30793 250 aa14.22□□□□□ -0.13
TIMP3-201ENST00000266085 PSPHP78330 225 aa14.22□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms