RNA–Protein interactions for RNA: ENST00000265810.8

PDLIM2-201, Transcript of PDZ and LIM domain 2, humanhuman

TSL 1 (best) BASIC

Gene PDLIM2, Length 4,592 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-201ENST00000265810 CWF19L1Q69YN2 538 aaKnown RBP13.22□□□□□ -0.29
PDLIM2-201ENST00000265810 H1FNTQ75WM6 255 aaPredicted RBP13.22□□□□□ -0.29
PDLIM2-201ENST00000265810 PTPMT1Q8WUK0 201 aaPredicted RBP13.22□□□□□ -0.29
PDLIM2-201ENST00000265810 THRSPQ92748 146 aa13.22□□□□□ -0.29
PDLIM2-201ENST00000265810 ULBP2Q9BZM5 246 aa13.22□□□□□ -0.29
PDLIM2-201ENST00000265810 NAA50Q9GZZ1 169 aaKnown RBP13.22□□□□□ -0.29
PDLIM2-201ENST00000265810 ZC4H2Q9NQZ6 224 aa13.22□□□□□ -0.29
PDLIM2-201ENST00000265810 TMEFF2Q9UIK5 374 aaPredicted RBP13.22□□□□□ -0.29
PDLIM2-201ENST00000265810 A0A1W2PQ72 361 aa13.22□□□□□ -0.29
PDLIM2-201ENST00000265810 RFC3P40938 356 aa13.22□□□□□ -0.29
PDLIM2-201ENST00000265810 GZMMP51124 257 aa13.22□□□□□ -0.29
PDLIM2-201ENST00000265810 RHAGQ02094 409 aa13.22□□□□□ -0.29
PDLIM2-201ENST00000265810 MOGQ16653 247 aa13.22□□□□□ -0.29
PDLIM2-201ENST00000265810 SYT14P1Q58G82 188 aa13.22□□□□□ -0.29
PDLIM2-201ENST00000265810 OR10G3Q8NGC4 313 aa13.22□□□□□ -0.29
PDLIM2-201ENST00000265810 OR5AK2Q8NH90 309 aa13.22□□□□□ -0.29
PDLIM2-201ENST00000265810 ITFG2Q969R8 447 aa13.22□□□□□ -0.29
PDLIM2-201ENST00000265810 ZNF566Q969W8 418 aa13.22□□□□□ -0.29
PDLIM2-201ENST00000265810 LMF1Q96S06 567 aa13.22□□□□□ -0.29
PDLIM2-201ENST00000265810 TMEM72A0PK05 275 aa13.22□□□□□ -0.29
PDLIM2-201ENST00000265810 F5H5K5 113 aa13.22□□□□□ -0.29
PDLIM2-201ENST00000265810 LCN1P31025 176 aa13.22□□□□□ -0.29
PDLIM2-201ENST00000265810 FOXC1Q12948 553 aa13.22□□□□□ -0.29
PDLIM2-201ENST00000265810 TMEM201Q5SNT2 666 aa13.22□□□□□ -0.29
PDLIM2-201ENST00000265810 OSGIN1Q9UJX0 560 aa13.22□□□□□ -0.29
PDLIM2-201ENST00000265810 FBXL4Q9UKA2 621 aa13.22□□□□□ -0.29
PDLIM2-201ENST00000265810 NOX1Q9Y5S8 564 aa13.22□□□□□ -0.29
PDLIM2-201ENST00000265810 SNRPGP62308 76 aaKnown RBP13.22□□□□□ -0.29
PDLIM2-201ENST00000265810 DGAT2L6Q6ZPD8 337 aa13.22□□□□□ -0.29
PDLIM2-201ENST00000265810 ZAR1Q86SH2 424 aa13.22□□□□□ -0.29
PDLIM2-201ENST00000265810 SAMD12Q8N8I0 201 aa13.22□□□□□ -0.29
PDLIM2-201ENST00000265810 OR2Y1Q8NGV0 311 aa13.22□□□□□ -0.29
PDLIM2-201ENST00000265810 CEPT1Q9Y6K0 416 aa13.22□□□□□ -0.29
PDLIM2-201ENST00000265810 CKAP5Q14008 2032 aa13.21□□□□□ -0.29
PDLIM2-201ENST00000265810 CDK4P11802 303 aa13.21□□□□□ -0.29
PDLIM2-201ENST00000265810 FUT7Q11130 342 aa13.21□□□□□ -0.29
PDLIM2-201ENST00000265810 CBLN3Q6UW01 205 aa13.21□□□□□ -0.29
PDLIM2-201ENST00000265810 DPY19L4Q7Z388 723 aa13.21□□□□□ -0.29
PDLIM2-201ENST00000265810 PLCZ1Q86YW0 608 aa13.21□□□□□ -0.29
PDLIM2-201ENST00000265810 LRRC17Q8N6Y2 441 aa13.21□□□□□ -0.29
PDLIM2-201ENST00000265810 ST8SIA1Q92185 356 aa13.21□□□□□ -0.29
PDLIM2-201ENST00000265810 SLC30A2Q9BRI3 323 aa13.21□□□□□ -0.29
PDLIM2-201ENST00000265810 EMC6Q9BV81 110 aa13.21□□□□□ -0.29
PDLIM2-201ENST00000265810 HINT3Q9NQE9 182 aaKnown RBP13.21□□□□□ -0.29
PDLIM2-201ENST00000265810 PLEK2Q9NYT0 353 aa13.21□□□□□ -0.29
PDLIM2-201ENST00000265810 KLHL13Q9P2N7 655 aa13.21□□□□□ -0.29
PDLIM2-201ENST00000265810 HTR1FP30939 366 aa13.21□□□□□ -0.29
PDLIM2-201ENST00000265810 BMXP51813 675 aa13.21□□□□□ -0.29
PDLIM2-201ENST00000265810 C9orf135Q5VTT2 229 aa13.21□□□□□ -0.29
PDLIM2-201ENST00000265810 AGAP7PQ5VUJ5 663 aa13.21□□□□□ -0.29
PDLIM2-201ENST00000265810 TMPRSS12Q86WS5 348 aa13.21□□□□□ -0.29
PDLIM2-201ENST00000265810 SNX29P2Q8IUI4 249 aa13.21□□□□□ -0.29
PDLIM2-201ENST00000265810 AGAP4Q96P64 663 aa13.21□□□□□ -0.29
PDLIM2-201ENST00000265810 OR5M11Q96RB7 305 aa13.21□□□□□ -0.29
PDLIM2-201ENST00000265810 ENPP5Q9UJA9 477 aa13.21□□□□□ -0.29
PDLIM2-201ENST00000265810 GIMAP1-GIMAP5A0A087WTJ2 511 aa13.21□□□□□ -0.3
PDLIM2-201ENST00000265810 TCRBV16S1A1N1A0A5B0 115 aa13.21□□□□□ -0.3
PDLIM2-201ENST00000265810 IDH3BO43837 385 aa13.21□□□□□ -0.3
PDLIM2-201ENST00000265810 MAS1P04201 325 aa13.21□□□□□ -0.3
PDLIM2-201ENST00000265810 SLC37A1P57057 533 aa13.21□□□□□ -0.3
PDLIM2-201ENST00000265810 PRKCDQ05655 676 aa13.21□□□□□ -0.3
PDLIM2-201ENST00000265810 ZNF829Q3KNS6 432 aaPredicted RBP13.21□□□□□ -0.3
PDLIM2-201ENST00000265810 HBMQ6B0K9 141 aa13.21□□□□□ -0.3
PDLIM2-201ENST00000265810 OR7E24Q6IFN5 339 aa13.21□□□□□ -0.3
PDLIM2-201ENST00000265810 ZNF227Q86WZ6 799 aa13.21□□□□□ -0.3
PDLIM2-201ENST00000265810 PM20D2Q8IYS1 436 aa13.21□□□□□ -0.3
PDLIM2-201ENST00000265810 NDNFQ8TB73 568 aa13.21□□□□□ -0.3
PDLIM2-201ENST00000265810 SLC25A43Q8WUT9 341 aaPredicted RBP13.21□□□□□ -0.3
PDLIM2-201ENST00000265810 RPL3LQ92901 407 aaKnown RBP13.21□□□□□ -0.3
PDLIM2-201ENST00000265810 GIMAP5Q96F15 307 aa13.21□□□□□ -0.3
PDLIM2-201ENST00000265810 DNAJB12Q9NXW2 375 aaKnown RBP13.21□□□□□ -0.3
PDLIM2-201ENST00000265810 CMAHPQ9Y471 501 aa13.21□□□□□ -0.3
PDLIM2-201ENST00000265810 ARRDC5A6NEK1 342 aa13.2□□□□□ -0.3
PDLIM2-201ENST00000265810 OR6C70A6NIJ9 312 aa13.2□□□□□ -0.3
PDLIM2-201ENST00000265810 MRPL33O75394 65 aaKnown RBP13.2□□□□□ -0.3
PDLIM2-201ENST00000265810 IFNA6P05013 189 aa13.2□□□□□ -0.3
PDLIM2-201ENST00000265810 ZNF117Q03924 483 aa13.2□□□□□ -0.3
PDLIM2-201ENST00000265810 DEFB109BQ30KR1 87 aa13.2□□□□□ -0.3
PDLIM2-201ENST00000265810 NIPAL3Q6P499 406 aa13.2□□□□□ -0.3
PDLIM2-201ENST00000265810 ASB18Q6ZVZ8 466 aa13.2□□□□□ -0.3
PDLIM2-201ENST00000265810 CT55Q8WUE5 264 aa13.2□□□□□ -0.3
PDLIM2-201ENST00000265810 CLEC2DQ9UHP7 191 aa13.2□□□□□ -0.3
PDLIM2-201ENST00000265810 ZNF593O00488 134 aaPredicted RBP13.2□□□□□ -0.3
PDLIM2-201ENST00000265810 EIF1BO60739 113 aaKnown RBP13.2□□□□□ -0.3
PDLIM2-201ENST00000265810 SMIM10L1P0DMW3 83 aa13.2□□□□□ -0.3
PDLIM2-201ENST00000265810 SLC2A2P11168 524 aaPredicted RBP13.2□□□□□ -0.3
PDLIM2-201ENST00000265810 GDI2P50395 445 aaKnown RBP13.2□□□□□ -0.3
PDLIM2-201ENST00000265810 SQSTM1Q13501 440 aa13.2□□□□□ -0.3
PDLIM2-201ENST00000265810 SSPNQ14714 243 aa13.2□□□□□ -0.3
PDLIM2-201ENST00000265810 ISXQ2M1V0 245 aa13.2□□□□□ -0.3
PDLIM2-201ENST00000265810 TUBA3EQ6PEY2 450 aa13.2□□□□□ -0.3
PDLIM2-201ENST00000265810 AAED1Q7RTV5 226 aa13.2□□□□□ -0.3
PDLIM2-201ENST00000265810 DTX3Q8N9I9 347 aa13.2□□□□□ -0.3
PDLIM2-201ENST00000265810 OR52I1Q8NGK6 324 aa13.2□□□□□ -0.3
PDLIM2-201ENST00000265810 SMIM10Q96HG1 83 aa13.2□□□□□ -0.3
PDLIM2-201ENST00000265810 DTX4Q9Y2E6 619 aa13.2□□□□□ -0.3
PDLIM2-201ENST00000265810 SCN2AQ99250 2005 aa13.2□□□□□ -0.3
PDLIM2-201ENST00000265810 MN1Q10571 1320 aaPredicted RBP13.2□□□□□ -0.3
PDLIM2-201ENST00000265810 RRP8O43159 456 aaKnown RBP13.2□□□□□ -0.3
PDLIM2-201ENST00000265810 OR8G3PP0DMU2 310 aa13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms