RNA–Protein interactions for RNA: ENST00000261889.9

SNX1-201, Transcript of sorting nexin 1, humanhuman

TSL 2 BASIC

Gene SNX1, Length 3,373 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-201ENST00000261889 ST6GALNAC2Q9UJ37 374 aa11.93□□□□□ -0.5
SNX1-201ENST00000261889 POMT2Q9UKY4 750 aa11.93□□□□□ -0.5
SNX1-201ENST00000261889 DTX4Q9Y2E6 619 aa11.93□□□□□ -0.5
SNX1-201ENST00000261889 MED31Q9Y3C7 131 aa11.93□□□□□ -0.5
SNX1-201ENST00000261889 RP1P56715 2156 aa11.92□□□□□ -0.5
SNX1-201ENST00000261889 A0A1B0GWA3 101 aa11.92□□□□□ -0.5
SNX1-201ENST00000261889 PLPP2O43688 288 aa11.92□□□□□ -0.5
SNX1-201ENST00000261889 CISD3P0C7P0 127 aa11.92□□□□□ -0.5
SNX1-201ENST00000261889 ITPKBP27987 946 aa11.92□□□□□ -0.5
SNX1-201ENST00000261889 TAGLNQ01995 201 aaKnown RBP11.92□□□□□ -0.5
SNX1-201ENST00000261889 MRGPREQ86SM8 312 aa11.92□□□□□ -0.5
SNX1-201ENST00000261889 LRRC25Q8N386 305 aaPredicted RBP11.92□□□□□ -0.5
SNX1-201ENST00000261889 ACOT12Q8WYK0 555 aa11.92□□□□□ -0.5
SNX1-201ENST00000261889 TOE1Q96GM8 510 aaKnown RBP11.92□□□□□ -0.5
SNX1-201ENST00000261889 PLXNA2O75051 1894 aa11.92□□□□□ -0.5
SNX1-201ENST00000261889 CABIN1Q9Y6J0 2220 aa11.92□□□□□ -0.5
SNX1-201ENST00000261889 FAM25EA8MYX2 175 aa11.92□□□□□ -0.5
SNX1-201ENST00000261889 PDCD5O14737 125 aa11.92□□□□□ -0.5
SNX1-201ENST00000261889 NMBP08949 121 aa11.92□□□□□ -0.5
SNX1-201ENST00000261889 ZNF3P17036 446 aa11.92□□□□□ -0.5
SNX1-201ENST00000261889 SRMP19623 302 aa11.92□□□□□ -0.5
SNX1-201ENST00000261889 M6PRP20645 277 aa11.92□□□□□ -0.5
SNX1-201ENST00000261889 SIRPAP78324 504 aa11.92□□□□□ -0.5
SNX1-201ENST00000261889 SMAD2Q15796 467 aaKnown RBP11.92□□□□□ -0.5
SNX1-201ENST00000261889 PCGF3Q3KNV8 242 aa11.92□□□□□ -0.5
SNX1-201ENST00000261889 ALG10BQ5I7T1 473 aa11.92□□□□□ -0.5
SNX1-201ENST00000261889 LILRA6Q6PI73 481 aa11.92□□□□□ -0.5
SNX1-201ENST00000261889 LRFN4Q6PJG9 635 aa11.92□□□□□ -0.5
SNX1-201ENST00000261889 TMEM205Q6UW68 189 aa11.92□□□□□ -0.5
SNX1-201ENST00000261889 TNFAIP8L1Q8WVP5 186 aa11.92□□□□□ -0.5
SNX1-201ENST00000261889 RABL2AQ9UBK7 228 aaPredicted RBP11.92□□□□□ -0.5
SNX1-201ENST00000261889 MAFFQ9ULX9 164 aa11.92□□□□□ -0.5
SNX1-201ENST00000261889 YBX2Q9Y2T7 364 aaKnown RBP11.92□□□□□ -0.5
SNX1-201ENST00000261889 OR6C68A6NDL8 312 aa11.92□□□□□ -0.5
SNX1-201ENST00000261889 M0QYG6 137 aa11.92□□□□□ -0.5
SNX1-201ENST00000261889 DCTN6O00399 190 aa11.92□□□□□ -0.5
SNX1-201ENST00000261889 CLEC3AO75596 197 aa11.92□□□□□ -0.5
SNX1-201ENST00000261889 ERVK-21P61565 698 aa11.92□□□□□ -0.5
SNX1-201ENST00000261889 CLLU1Q5K131 121 aa11.92□□□□□ -0.5
SNX1-201ENST00000261889 DMKNQ6E0U4 476 aaPredicted RBP11.92□□□□□ -0.5
SNX1-201ENST00000261889 FAM199XQ6PEV8 388 aaPredicted RBP11.92□□□□□ -0.5
SNX1-201ENST00000261889 SLC35D2Q76EJ3 337 aa11.92□□□□□ -0.5
SNX1-201ENST00000261889 SLC51BQ86UW2 128 aa11.92□□□□□ -0.5
SNX1-201ENST00000261889 RANBP3LQ86VV4 465 aaPredicted RBP11.92□□□□□ -0.5
SNX1-201ENST00000261889 GID4Q8IVV7 300 aa11.92□□□□□ -0.5
SNX1-201ENST00000261889 CDK20Q8IZL9 346 aa11.92□□□□□ -0.5
SNX1-201ENST00000261889 HAVCR2Q8TDQ0 301 aa11.92□□□□□ -0.5
SNX1-201ENST00000261889 RGP1Q92546 391 aaPredicted RBP11.92□□□□□ -0.5
SNX1-201ENST00000261889 C3orf49Q96BT1 292 aa11.92□□□□□ -0.5
SNX1-201ENST00000261889 PELI2Q9HAT8 420 aa11.92□□□□□ -0.5
SNX1-201ENST00000261889 CMC2Q9NRP2 79 aa11.92□□□□□ -0.5
SNX1-201ENST00000261889 TBC1D29Q9UFV1 150 aa11.92□□□□□ -0.5
SNX1-201ENST00000261889 MRTO4Q9UKD2 239 aaKnown RBP11.92□□□□□ -0.5
SNX1-201ENST00000261889 TRAV8-7A0A075B6U6 113 aa11.91□□□□□ -0.5
SNX1-201ENST00000261889 POM121BA6NF01 834 aa11.91□□□□□ -0.5
SNX1-201ENST00000261889 SUSD5O60279 629 aa11.91□□□□□ -0.5
SNX1-201ENST00000261889 NKPD1Q17RQ9 610 aa11.91□□□□□ -0.5
SNX1-201ENST00000261889 C4orf46Q504U0 113 aa11.91□□□□□ -0.5
SNX1-201ENST00000261889 TMEM64Q6YI46 380 aa11.91□□□□□ -0.5
SNX1-201ENST00000261889 FGF22Q9HCT0 170 aa11.91□□□□□ -0.5
SNX1-201ENST00000261889 FARSAQ9Y285 508 aaKnown RBP11.91□□□□□ -0.5
SNX1-201ENST00000261889 SLC22A31A6NKX4 558 aa11.91□□□□□ -0.5
SNX1-201ENST00000261889 CTNSO60931 367 aa11.91□□□□□ -0.5
SNX1-201ENST00000261889 PLGP00747 810 aaPredicted RBP11.91□□□□□ -0.5
SNX1-201ENST00000261889 ATP1B1P05026 303 aa11.91□□□□□ -0.5
SNX1-201ENST00000261889 NFYAP23511 347 aaPredicted RBP11.91□□□□□ -0.5
SNX1-201ENST00000261889 DRD3P35462 400 aa11.91□□□□□ -0.5
SNX1-201ENST00000261889 PPM1AP35813 382 aa11.91□□□□□ -0.5
SNX1-201ENST00000261889 ELAVL3Q14576 367 aaKnown RBP11.91□□□□□ -0.5
SNX1-201ENST00000261889 CDK5R1Q15078 307 aa11.91□□□□□ -0.5
SNX1-201ENST00000261889 VITQ6UXI7 678 aa11.91□□□□□ -0.5
SNX1-201ENST00000261889 SLC35F2Q8IXU6 374 aa11.91□□□□□ -0.5
SNX1-201ENST00000261889 OR51D1Q8NGF3 324 aa11.91□□□□□ -0.5
SNX1-201ENST00000261889 OR51S1Q8NGJ8 323 aa11.91□□□□□ -0.5
SNX1-201ENST00000261889 SMIM4Q8WVI0 70 aa11.91□□□□□ -0.5
SNX1-201ENST00000261889 AHCYL2Q96HN2 611 aaKnown RBP11.91□□□□□ -0.5
SNX1-201ENST00000261889 OR5V1Q9UGF6 321 aa11.91□□□□□ -0.5
SNX1-201ENST00000261889 ZNF223Q9UK11 482 aaPredicted RBP11.91□□□□□ -0.5
SNX1-201ENST00000261889 P2RX1P51575 399 aa11.9□□□□□ -0.5
SNX1-201ENST00000261889 CBFBQ13951 182 aa11.9□□□□□ -0.5
SNX1-201ENST00000261889 HLXQ14774 488 aaPredicted RBP11.9□□□□□ -0.5
SNX1-201ENST00000261889 FCRL6Q6DN72 434 aa11.9□□□□□ -0.5
SNX1-201ENST00000261889 LNX2Q8N448 690 aa11.9□□□□□ -0.5
SNX1-201ENST00000261889 ZNF454Q8N9F8 522 aa11.9□□□□□ -0.5
SNX1-201ENST00000261889 ZNF75AQ96N20 296 aa11.9□□□□□ -0.5
SNX1-201ENST00000261889 UBL7Q96S82 380 aaPredicted RBP11.9□□□□□ -0.5
SNX1-201ENST00000261889 MTHFD2LQ9H903 347 aaPredicted RBP11.9□□□□□ -0.5
SNX1-201ENST00000261889 ISYNA1Q9NPH2 558 aa11.9□□□□□ -0.5
SNX1-201ENST00000261889 FBXO9Q9UK97 447 aaPredicted RBP11.9□□□□□ -0.5
SNX1-201ENST00000261889 ADRA2CP18825 462 aa11.9□□□□□ -0.5
SNX1-201ENST00000261889 MMP15P51511 669 aa11.9□□□□□ -0.5
SNX1-201ENST00000261889 EEF1A1P68104 462 aaKnown RBP11.9□□□□□ -0.5
SNX1-201ENST00000261889 AMZ1Q400G9 498 aa11.9□□□□□ -0.5
SNX1-201ENST00000261889 FAM69AQ5T7M9 428 aa11.9□□□□□ -0.5
SNX1-201ENST00000261889 SEZ6L2Q6UXD5 910 aa11.9□□□□□ -0.5
SNX1-201ENST00000261889 NRROSQ86YC3 692 aa11.9□□□□□ -0.5
SNX1-201ENST00000261889 NRSN1Q8IZ57 195 aa11.9□□□□□ -0.5
SNX1-201ENST00000261889 TTC9Q92623 222 aa11.9□□□□□ -0.5
SNX1-201ENST00000261889 PRSS16Q9NQE7 514 aa11.9□□□□□ -0.5
SNX1-201ENST00000261889 CPNE7Q9UBL6 633 aa11.9□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms