RNA–Protein interactions for RNA: ENST00000260054.8

CCDC90B-201, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 2

Gene CCDC90B, Length 1,688 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-201ENST00000260054 TRAV27A0A087WT01 109 aa14.14□□□□□ -0.15
CCDC90B-201ENST00000260054 IGHV3-15A0A0B4J1V0 119 aa14.14□□□□□ -0.15
CCDC90B-201ENST00000260054 UNC119BA6NIH7 251 aa14.14□□□□□ -0.15
CCDC90B-201ENST00000260054 SMAD9O15198 467 aaKnown RBP14.14□□□□□ -0.15
CCDC90B-201ENST00000260054 MITFO75030 526 aaPredicted RBP14.14□□□□□ -0.15
CCDC90B-201ENST00000260054 PRB1P04280 392 aa14.14□□□□□ -0.15
CCDC90B-201ENST00000260054 ALPLP05186 524 aa14.14□□□□□ -0.15
CCDC90B-201ENST00000260054 ZNF26P17031 533 aaPredicted RBP14.14□□□□□ -0.15
CCDC90B-201ENST00000260054 ENPP1P22413 925 aa14.14□□□□□ -0.15
CCDC90B-201ENST00000260054 GTF2E2P29084 291 aaKnown RBP14.14□□□□□ -0.15
CCDC90B-201ENST00000260054 P2RY4P51582 365 aa14.14□□□□□ -0.15
CCDC90B-201ENST00000260054 NUP107P57740 925 aa14.14□□□□□ -0.15
CCDC90B-201ENST00000260054 FXYD6P3P58550 94 aa14.14□□□□□ -0.15
CCDC90B-201ENST00000260054 H3F3AP84243 136 aa14.14□□□□□ -0.15
CCDC90B-201ENST00000260054 SGCBQ16585 318 aa14.14□□□□□ -0.15
CCDC90B-201ENST00000260054 ZNF239Q16600 458 aaKnown RBP14.14□□□□□ -0.15
CCDC90B-201ENST00000260054 KLHL17Q6TDP4 642 aa14.14□□□□□ -0.15
CCDC90B-201ENST00000260054 CD300LDQ6UXZ3 194 aa14.14□□□□□ -0.15
CCDC90B-201ENST00000260054 TMEM99Q8N816 258 aa14.14□□□□□ -0.15
CCDC90B-201ENST00000260054 FAM57AQ8TBR7 257 aa14.14□□□□□ -0.15
CCDC90B-201ENST00000260054 MAGEE2Q8TD90 523 aaPredicted RBP14.14□□□□□ -0.15
CCDC90B-201ENST00000260054 CPNE4Q96A23 557 aaPredicted RBP14.14□□□□□ -0.15
CCDC90B-201ENST00000260054 TNFRSF13CQ96RJ3 184 aa14.14□□□□□ -0.15
CCDC90B-201ENST00000260054 UCN2Q96RP3 112 aa14.14□□□□□ -0.15
CCDC90B-201ENST00000260054 RBM4BQ9BQ04 359 aaKnown RBP14.14□□□□□ -0.15
CCDC90B-201ENST00000260054 RBM4Q9BWF3 364 aaKnown RBP14.14□□□□□ -0.15
CCDC90B-201ENST00000260054 ASPNQ9BXN1 380 aa14.14□□□□□ -0.15
CCDC90B-201ENST00000260054 SIGLEC7Q9Y286 467 aa14.14□□□□□ -0.15
CCDC90B-201ENST00000260054 CORINQ9Y5Q5 1042 aa14.14□□□□□ -0.15
CCDC90B-201ENST00000260054 DNPH1O43598 174 aa14.14□□□□□ -0.15
CCDC90B-201ENST00000260054 RAMP1O60894 148 aa14.14□□□□□ -0.15
CCDC90B-201ENST00000260054 PTP4A3O75365 173 aa14.14□□□□□ -0.15
CCDC90B-201ENST00000260054 TPOP07202 933 aa14.14□□□□□ -0.15
CCDC90B-201ENST00000260054 TSPAN19P0C672 248 aa14.14□□□□□ -0.15
CCDC90B-201ENST00000260054 ABOP16442 354 aa14.14□□□□□ -0.15
CCDC90B-201ENST00000260054 SLC9A3P48764 834 aa14.14□□□□□ -0.15
CCDC90B-201ENST00000260054 ALDH3A2P51648 485 aa14.14□□□□□ -0.15
CCDC90B-201ENST00000260054 AGFG1P52594 562 aaKnown RBP14.14□□□□□ -0.15
CCDC90B-201ENST00000260054 RPS4XP62701 263 aaKnown RBP14.14□□□□□ -0.15
CCDC90B-201ENST00000260054 PMS2P3Q13401 168 aa14.14□□□□□ -0.15
CCDC90B-201ENST00000260054 PON3Q15166 354 aa14.14□□□□□ -0.15
CCDC90B-201ENST00000260054 PAQR6Q6TCH4 344 aa14.14□□□□□ -0.15
CCDC90B-201ENST00000260054 H1FNTQ75WM6 255 aaPredicted RBP14.14□□□□□ -0.15
CCDC90B-201ENST00000260054 NANOGNBQ7Z5D8 188 aa14.14□□□□□ -0.15
CCDC90B-201ENST00000260054 ADGRE4PQ86SQ3 457 aa14.14□□□□□ -0.15
CCDC90B-201ENST00000260054 CD163Q86VB7 1156 aa14.14□□□□□ -0.15
CCDC90B-201ENST00000260054 KIF18BQ86Y91 864 aa14.14□□□□□ -0.15
CCDC90B-201ENST00000260054 CCDC103Q8IW40 242 aa14.14□□□□□ -0.15
CCDC90B-201ENST00000260054 SCAIQ8N9R8 606 aa14.14□□□□□ -0.15
CCDC90B-201ENST00000260054 OR5J2Q8NH18 312 aa14.14□□□□□ -0.15
CCDC90B-201ENST00000260054 ZPLD1Q8TCW7 415 aa14.14□□□□□ -0.15
CCDC90B-201ENST00000260054 ROBO4Q8WZ75 1007 aa14.14□□□□□ -0.15
CCDC90B-201ENST00000260054 UCK2Q9BZX2 261 aa14.14□□□□□ -0.15
CCDC90B-201ENST00000260054 ZNF556Q9HAH1 456 aa14.14□□□□□ -0.15
CCDC90B-201ENST00000260054 MCCC2Q9HCC0 563 aa14.14□□□□□ -0.15
CCDC90B-201ENST00000260054 CHST11Q9NPF2 352 aa14.14□□□□□ -0.15
CCDC90B-201ENST00000260054 TIGARQ9NQ88 270 aa14.14□□□□□ -0.15
CCDC90B-201ENST00000260054 PAQR5Q9NXK6 330 aaPredicted RBP14.14□□□□□ -0.15
CCDC90B-201ENST00000260054 MRPL39Q9NYK5 338 aaKnown RBP14.14□□□□□ -0.15
CCDC90B-201ENST00000260054 USE1Q9NZ43 259 aa14.14□□□□□ -0.15
CCDC90B-201ENST00000260054 REV1Q9UBZ9 1251 aa14.14□□□□□ -0.15
CCDC90B-201ENST00000260054 HIF3AQ9Y2N7 669 aa14.14□□□□□ -0.15
CCDC90B-201ENST00000260054 ZNF835Q9Y2P0 537 aa14.14□□□□□ -0.15
CCDC90B-201ENST00000260054 ZGRF1Q86YA3 2104 aa14.13□□□□□ -0.15
CCDC90B-201ENST00000260054 AQP7P3A6NL99 342 aa14.13□□□□□ -0.15
CCDC90B-201ENST00000260054 CLCA1A8K7I4 914 aa14.13□□□□□ -0.15
CCDC90B-201ENST00000260054 KDM4EB2RXH2 506 aaPredicted RBP14.13□□□□□ -0.15
CCDC90B-201ENST00000260054 BLOC1S5-TXNDC5H3BN57 136 aa14.13□□□□□ -0.15
CCDC90B-201ENST00000260054 PLPP3O14495 311 aa14.13□□□□□ -0.15
CCDC90B-201ENST00000260054 EIF1BO60739 113 aaKnown RBP14.13□□□□□ -0.15
CCDC90B-201ENST00000260054 TP53P04637 393 aaPredicted RBP14.13□□□□□ -0.15
CCDC90B-201ENST00000260054 HIST1H2ABP04908 130 aa14.13□□□□□ -0.15
CCDC90B-201ENST00000260054 IGFBP1P08833 259 aaPredicted RBP14.13□□□□□ -0.15
CCDC90B-201ENST00000260054 GSTM3P21266 225 aa14.13□□□□□ -0.15
CCDC90B-201ENST00000260054 IGFBP5P24593 272 aa14.13□□□□□ -0.15
CCDC90B-201ENST00000260054 UQCRC1P31930 480 aa14.13□□□□□ -0.15
CCDC90B-201ENST00000260054 PTDSS1P48651 473 aaKnown RBP14.13□□□□□ -0.15
CCDC90B-201ENST00000260054 IL1RL1Q01638 556 aa14.13□□□□□ -0.15
CCDC90B-201ENST00000260054 COX10Q12887 443 aa14.13□□□□□ -0.15
CCDC90B-201ENST00000260054 ZBED5Q49AG3 693 aa14.13□□□□□ -0.15
CCDC90B-201ENST00000260054 PPP4R4Q6NUP7 873 aa14.13□□□□□ -0.15
CCDC90B-201ENST00000260054 ZNF585AQ6P3V2 769 aa14.13□□□□□ -0.15
CCDC90B-201ENST00000260054 RASSF6Q6ZTQ3 369 aa14.13□□□□□ -0.15
CCDC90B-201ENST00000260054 HIST3H2AQ7L7L0 130 aa14.13□□□□□ -0.15
CCDC90B-201ENST00000260054 CHMP1BQ7LBR1 199 aa14.13□□□□□ -0.15
CCDC90B-201ENST00000260054 GALNT5Q7Z7M9 940 aa14.13□□□□□ -0.15
CCDC90B-201ENST00000260054 ST6GALNAC3Q8NDV1 305 aa14.13□□□□□ -0.15
CCDC90B-201ENST00000260054 MOSPD2Q8NHP6 518 aa14.13□□□□□ -0.15
CCDC90B-201ENST00000260054 FNDC9Q8TBE3 224 aa14.13□□□□□ -0.15
CCDC90B-201ENST00000260054 HIST1H2ACQ93077 130 aa14.13□□□□□ -0.15
CCDC90B-201ENST00000260054 EGLN3Q9H6Z9 239 aa14.13□□□□□ -0.15
CCDC90B-201ENST00000260054 PAPOLBQ9NRJ5 636 aaKnown RBP14.13□□□□□ -0.15
CCDC90B-201ENST00000260054 KRT84Q9NSB2 600 aa14.13□□□□□ -0.15
CCDC90B-201ENST00000260054 TAS2R5Q9NYW4 299 aa14.13□□□□□ -0.15
CCDC90B-201ENST00000260054 B3GALT5Q9Y2C3 310 aa14.13□□□□□ -0.15
CCDC90B-201ENST00000260054 CFAP46Q8IYW2 2715 aa14.13□□□□□ -0.15
CCDC90B-201ENST00000260054 AHRRA9YTQ3 701 aa14.12□□□□□ -0.15
CCDC90B-201ENST00000260054 SLC19A2O60779 497 aa14.12□□□□□ -0.15
CCDC90B-201ENST00000260054 SOX14O95416 240 aa14.12□□□□□ -0.15
CCDC90B-201ENST00000260054 AQP2P41181 271 aa14.12□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms