RNA–Protein interactions for RNA: ENST00000259460.12

RABEPK-201, Transcript of Rab9 effector protein with kelch motifs, humanhuman

TSL 1 (best) BASIC

Gene RABEPK, Length 1,313 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABEPK-201ENST00000259460 FLRT3Q9NZU0 649 aa12.59□□□□□ -0.39
RABEPK-201ENST00000259460 NIPSNAP3AQ9UFN0 247 aaPredicted RBP12.59□□□□□ -0.39
RABEPK-201ENST00000259460 LEF1Q9UJU2 399 aaPredicted RBP12.59□□□□□ -0.39
RABEPK-201ENST00000259460 ABCG2Q9UNQ0 655 aa12.59□□□□□ -0.39
RABEPK-201ENST00000259460 KCNE3Q9Y6H6 103 aa12.59□□□□□ -0.39
RABEPK-201ENST00000259460 CAPN7Q9Y6W3 813 aa12.59□□□□□ -0.39
RABEPK-201ENST00000259460 A0A096LPI6 279 aa12.58□□□□□ -0.4
RABEPK-201ENST00000259460 TIMM23O14925 209 aa12.58□□□□□ -0.4
RABEPK-201ENST00000259460 AK1P00568 194 aa12.58□□□□□ -0.4
RABEPK-201ENST00000259460 KNG1P01042 644 aa12.58□□□□□ -0.4
RABEPK-201ENST00000259460 DRD4P21917 467 aa12.58□□□□□ -0.4
RABEPK-201ENST00000259460 MAPRE2Q15555 327 aa12.58□□□□□ -0.4
RABEPK-201ENST00000259460 BEAN1Q3B7T3 259 aa12.58□□□□□ -0.4
RABEPK-201ENST00000259460 GPAT3Q53EU6 434 aa12.58□□□□□ -0.4
RABEPK-201ENST00000259460 EXOSC6Q5RKV6 272 aaKnown RBP12.58□□□□□ -0.4
RABEPK-201ENST00000259460 RHOUQ7L0Q8 258 aa12.58□□□□□ -0.4
RABEPK-201ENST00000259460 ZAR1Q86SH2 424 aa12.58□□□□□ -0.4
RABEPK-201ENST00000259460 DHDDSQ86SQ9 333 aa12.58□□□□□ -0.4
RABEPK-201ENST00000259460 RNF217Q8TC41 542 aa12.58□□□□□ -0.4
RABEPK-201ENST00000259460 MRAPQ8TCY5 172 aa12.58□□□□□ -0.4
RABEPK-201ENST00000259460 ZFP90Q8TF47 636 aa12.58□□□□□ -0.4
RABEPK-201ENST00000259460 DUSP19Q8WTR2 217 aa12.58□□□□□ -0.4
RABEPK-201ENST00000259460 NPAS1Q99742 590 aa12.58□□□□□ -0.4
RABEPK-201ENST00000259460 RBM4BQ9BQ04 359 aaKnown RBP12.58□□□□□ -0.4
RABEPK-201ENST00000259460 SRXN1Q9BYN0 137 aa12.58□□□□□ -0.4
RABEPK-201ENST00000259460 NMUR2Q9GZQ4 415 aa12.58□□□□□ -0.4
RABEPK-201ENST00000259460 PAIP1Q9H074 479 aaKnown RBP12.58□□□□□ -0.4
RABEPK-201ENST00000259460 RAD21L1Q9H4I0 556 aa12.58□□□□□ -0.4
RABEPK-201ENST00000259460 TPT1P8Q9HAU6 139 aa12.58□□□□□ -0.4
RABEPK-201ENST00000259460 G6PC2Q9NQR9 355 aa12.58□□□□□ -0.4
RABEPK-201ENST00000259460 SLC6A13Q9NSD5 602 aa12.58□□□□□ -0.4
RABEPK-201ENST00000259460 NDUFAF1Q9Y375 327 aa12.58□□□□□ -0.4
RABEPK-201ENST00000259460 CIB4A0PJX0 185 aa12.57□□□□□ -0.4
RABEPK-201ENST00000259460 LYNX1G3V0Z9 82 aa12.57□□□□□ -0.4
RABEPK-201ENST00000259460 SCDO00767 359 aa12.57□□□□□ -0.4
RABEPK-201ENST00000259460 OXSR1O95747 527 aaPredicted RBP12.57□□□□□ -0.4
RABEPK-201ENST00000259460 TFP02787 698 aa12.57□□□□□ -0.4
RABEPK-201ENST00000259460 ERCC1P07992 297 aaPredicted RBP12.57□□□□□ -0.4
RABEPK-201ENST00000259460 ZCCHC18P0CG32 403 aa12.57□□□□□ -0.4
RABEPK-201ENST00000259460 LYNX1P0DP58 116 aa12.57□□□□□ -0.4
RABEPK-201ENST00000259460 GAAP10253 952 aa12.57□□□□□ -0.4
RABEPK-201ENST00000259460 ME2P23368 584 aa12.57□□□□□ -0.4
RABEPK-201ENST00000259460 OMGP23515 440 aa12.57□□□□□ -0.4
RABEPK-201ENST00000259460 FPR2P25090 351 aa12.57□□□□□ -0.4
RABEPK-201ENST00000259460 SERPINF1P36955 418 aa12.57□□□□□ -0.4
RABEPK-201ENST00000259460 CRATP43155 626 aa12.57□□□□□ -0.4
RABEPK-201ENST00000259460 KLF10Q13118 480 aa12.57□□□□□ -0.4
RABEPK-201ENST00000259460 MMEL1Q495T6 779 aa12.57□□□□□ -0.4
RABEPK-201ENST00000259460 PAGE3Q5JUK9 113 aa12.57□□□□□ -0.4
RABEPK-201ENST00000259460 DDX59Q5T1V6 619 aaKnown RBP eCLIP12.57□□□□□ -0.4
RABEPK-201ENST00000259460 FCRLAQ7L513 359 aa12.57□□□□□ -0.4
RABEPK-201ENST00000259460 GATSQ8NAP1 163 aa12.57□□□□□ -0.4
RABEPK-201ENST00000259460 ZNF527Q8NB42 609 aa12.57□□□□□ -0.4
RABEPK-201ENST00000259460 NANPQ8TBE9 248 aa12.57□□□□□ -0.4
RABEPK-201ENST00000259460 MIPOL1Q8TD10 442 aa12.57□□□□□ -0.4
RABEPK-201ENST00000259460 CPNE4Q96A23 557 aaPredicted RBP12.57□□□□□ -0.4
RABEPK-201ENST00000259460 LRRC58Q96CX6 371 aa12.57□□□□□ -0.4
RABEPK-201ENST00000259460 KLHL15Q96M94 604 aa12.57□□□□□ -0.4
RABEPK-201ENST00000259460 C1orf147Q96MC9 270 aaPredicted RBP12.57□□□□□ -0.4
RABEPK-201ENST00000259460 TMPRSS13Q9BYE2 586 aa12.57□□□□□ -0.4
RABEPK-201ENST00000259460 GP6Q9HCN6 339 aa12.57□□□□□ -0.4
RABEPK-201ENST00000259460 SAR1AQ9NR31 198 aa12.57□□□□□ -0.4
RABEPK-201ENST00000259460 COL7A1Q02388 2944 aa12.57□□□□□ -0.4
RABEPK-201ENST00000259460 TMEM247A6NEH6 219 aa12.56□□□□□ -0.4
RABEPK-201ENST00000259460 B9A039 149 aa12.56□□□□□ -0.4
RABEPK-201ENST00000259460 HMGN4O00479 90 aa12.56□□□□□ -0.4
RABEPK-201ENST00000259460 FADS1O60427 444 aa12.56□□□□□ -0.4
RABEPK-201ENST00000259460 CCDC22O60826 627 aa12.56□□□□□ -0.4
RABEPK-201ENST00000259460 PRKD3O94806 890 aa12.56□□□□□ -0.4
RABEPK-201ENST00000259460 TSPAN15O95858 294 aa12.56□□□□□ -0.4
RABEPK-201ENST00000259460 C1QCP02747 245 aa12.56□□□□□ -0.4
RABEPK-201ENST00000259460 RNASE1P07998 156 aaKnown RBP12.56□□□□□ -0.4
RABEPK-201ENST00000259460 SAGP10523 405 aaPredicted RBP12.56□□□□□ -0.4
RABEPK-201ENST00000259460 LCN1P31025 176 aa12.56□□□□□ -0.4
RABEPK-201ENST00000259460 SFTPDP35247 375 aa12.56□□□□□ -0.4
RABEPK-201ENST00000259460 RNF144AP50876 292 aaPredicted RBP12.56□□□□□ -0.4
RABEPK-201ENST00000259460 CARD18P57730 90 aa12.56□□□□□ -0.4
RABEPK-201ENST00000259460 DSTNP60981 165 aa12.56□□□□□ -0.4
RABEPK-201ENST00000259460 RAC1P63000 192 aa12.56□□□□□ -0.4
RABEPK-201ENST00000259460 TXNL4AP83876 142 aaKnown RBP12.56□□□□□ -0.4
RABEPK-201ENST00000259460 ZP4Q12836 540 aa12.56□□□□□ -0.4
RABEPK-201ENST00000259460 NFYCQ13952 458 aa12.56□□□□□ -0.4
RABEPK-201ENST00000259460 GPR68Q15743 365 aa12.56□□□□□ -0.4
RABEPK-201ENST00000259460 COX20Q5RI15 118 aa12.56□□□□□ -0.4
RABEPK-201ENST00000259460 C11orf87Q6NUJ2 197 aa12.56□□□□□ -0.4
RABEPK-201ENST00000259460 OLIG3Q7RTU3 272 aa12.56□□□□□ -0.4
RABEPK-201ENST00000259460 MARCH3Q86UD3 253 aa12.56□□□□□ -0.4
RABEPK-201ENST00000259460 SNX32Q86XE0 403 aa12.56□□□□□ -0.4
RABEPK-201ENST00000259460 SYT14Q8NB59 555 aa12.56□□□□□ -0.4
RABEPK-201ENST00000259460 UBASH3BQ8TF42 649 aa12.56□□□□□ -0.4
RABEPK-201ENST00000259460 NEU4Q8WWR8 484 aaPredicted RBP12.56□□□□□ -0.4
RABEPK-201ENST00000259460 RNF145Q96MT1 663 aa12.56□□□□□ -0.4
RABEPK-201ENST00000259460 UBQLN4Q9NRR5 601 aa12.56□□□□□ -0.4
RABEPK-201ENST00000259460 TREM2Q9NZC2 230 aa12.56□□□□□ -0.4
RABEPK-201ENST00000259460 P2RX2Q9UBL9 471 aa12.56□□□□□ -0.4
RABEPK-201ENST00000259460 WDR45Q9Y484 360 aa12.56□□□□□ -0.4
RABEPK-201ENST00000259460 G3V4G9 280 aa12.55□□□□□ -0.4
RABEPK-201ENST00000259460 CLIC1O00299 241 aa12.55□□□□□ -0.4
RABEPK-201ENST00000259460 SNX3O60493 162 aa12.55□□□□□ -0.4
RABEPK-201ENST00000259460 STX11O75558 287 aa12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms