RNA–Protein interactions for RNA: ENST00000258772.9

DDX56-201, Transcript of DEAD-box helicase 56, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX56, Length 2,336 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-201ENST00000258772 HSF2Q03933 536 aa13.94□□□□□ -0.18
DDX56-201ENST00000258772 NNATQ16517 81 aa13.94□□□□□ -0.18
DDX56-201ENST00000258772 C9orf50Q5SZB4 431 aa13.94□□□□□ -0.18
DDX56-201ENST00000258772 OOSP2Q86WS3 158 aa13.94□□□□□ -0.18
DDX56-201ENST00000258772 SLC22A18ASQ8N1D0 253 aa13.94□□□□□ -0.18
DDX56-201ENST00000258772 RPS4Y2Q8TD47 263 aa13.94□□□□□ -0.18
DDX56-201ENST00000258772 C3orf49Q96BT1 292 aa13.94□□□□□ -0.18
DDX56-201ENST00000258772 HCN3Q9P1Z3 774 aa13.94□□□□□ -0.18
DDX56-201ENST00000258772 RABL2AQ9UBK7 228 aaPredicted RBP13.94□□□□□ -0.18
DDX56-201ENST00000258772 RABL2BQ9UNT1 228 aa13.94□□□□□ -0.18
DDX56-201ENST00000258772 ZNF281Q9Y2X9 895 aa13.94□□□□□ -0.18
DDX56-201ENST00000258772 HS3ST3A1Q9Y663 406 aa13.94□□□□□ -0.18
DDX56-201ENST00000258772 RNF215Q9Y6U7 377 aa13.94□□□□□ -0.18
DDX56-201ENST00000258772 MEIKINA0A087WXM9 373 aa13.93□□□□□ -0.18
DDX56-201ENST00000258772 KIR2DS5A0A0G2JLQ3 304 aa13.93□□□□□ -0.18
DDX56-201ENST00000258772 A0A0G2JNG1 304 aa13.93□□□□□ -0.18
DDX56-201ENST00000258772 SERINC4A6NH21 518 aa13.93□□□□□ -0.18
DDX56-201ENST00000258772 ACOD1A6NK06 481 aa13.93□□□□□ -0.18
DDX56-201ENST00000258772 OR5K4A6NMS3 321 aa13.93□□□□□ -0.18
DDX56-201ENST00000258772 KIR2DS3K7RE56 304 aa13.93□□□□□ -0.18
DDX56-201ENST00000258772 AIPO00170 330 aa13.93□□□□□ -0.18
DDX56-201ENST00000258772 PDCD5O14737 125 aa13.93□□□□□ -0.18
DDX56-201ENST00000258772 CTNSO60931 367 aa13.93□□□□□ -0.18
DDX56-201ENST00000258772 MAGEB1P43366 347 aa13.93□□□□□ -0.18
DDX56-201ENST00000258772 NANOS3P60323 173 aaKnown RBP13.93□□□□□ -0.18
DDX56-201ENST00000258772 CAMK2DQ13557 499 aa13.93□□□□□ -0.18
DDX56-201ENST00000258772 ERV3-1Q14264 604 aa13.93□□□□□ -0.18
DDX56-201ENST00000258772 KIR2DS5Q14953 304 aa13.93□□□□□ -0.18
DDX56-201ENST00000258772 ZNF542PQ5EBM4 170 aa13.93□□□□□ -0.18
DDX56-201ENST00000258772 LINC01590Q5TEZ4 76 aa13.93□□□□□ -0.18
DDX56-201ENST00000258772 TMEM92Q6UXU6 159 aa13.93□□□□□ -0.18
DDX56-201ENST00000258772 TMEM184AQ6ZMB5 413 aa13.93□□□□□ -0.18
DDX56-201ENST00000258772 LINGO2Q7L985 606 aa13.93□□□□□ -0.18
DDX56-201ENST00000258772 FGD2Q7Z6J4 655 aa13.93□□□□□ -0.18
DDX56-201ENST00000258772 ZNF527Q8NB42 609 aa13.93□□□□□ -0.18
DDX56-201ENST00000258772 DACT3Q96B18 629 aaPredicted RBP13.93□□□□□ -0.18
DDX56-201ENST00000258772 SEMA6CQ9H3T2 930 aa13.93□□□□□ -0.18
DDX56-201ENST00000258772 A0A1B0GVI7 797 aa13.93□□□□□ -0.18
DDX56-201ENST00000258772 LEUTXA8MZ59 168 aa13.93□□□□□ -0.18
DDX56-201ENST00000258772 GLCEO94923 617 aa13.93□□□□□ -0.18
DDX56-201ENST00000258772 ZFPL1O95159 310 aa13.93□□□□□ -0.18
DDX56-201ENST00000258772 RAF1P04049 648 aa13.93□□□□□ -0.18
DDX56-201ENST00000258772 TPOP07202 933 aa13.93□□□□□ -0.18
DDX56-201ENST00000258772 RNH1P13489 461 aaKnown RBP13.93□□□□□ -0.18
DDX56-201ENST00000258772 POU3F3P20264 500 aaPredicted RBP13.93□□□□□ -0.18
DDX56-201ENST00000258772 DPP4P27487 766 aa13.93□□□□□ -0.18
DDX56-201ENST00000258772 PRPS1P60891 318 aa13.93□□□□□ -0.18
DDX56-201ENST00000258772 RPS4XP62701 263 aaKnown RBP13.93□□□□□ -0.18
DDX56-201ENST00000258772 IL10RAQ13651 578 aa13.93□□□□□ -0.18
DDX56-201ENST00000258772 ZNF684Q5T5D7 378 aa13.93□□□□□ -0.18
DDX56-201ENST00000258772 SFRP4Q6FHJ7 346 aaPredicted RBP13.93□□□□□ -0.18
DDX56-201ENST00000258772 ZNF433Q8N7K0 673 aaPredicted RBP13.93□□□□□ -0.18
DDX56-201ENST00000258772 FRMD1Q8N878 549 aa13.93□□□□□ -0.18
DDX56-201ENST00000258772 BCORP1Q8N888 145 aa13.93□□□□□ -0.18
DDX56-201ENST00000258772 ZNF680Q8NEM1 530 aa13.93□□□□□ -0.18
DDX56-201ENST00000258772 SLC25A18Q9H1K4 315 aa13.93□□□□□ -0.18
DDX56-201ENST00000258772 HEXA-AS1Q9H8Q6 139 aa13.93□□□□□ -0.18
DDX56-201ENST00000258772 BEX1Q9HBH7 125 aa13.93□□□□□ -0.18
DDX56-201ENST00000258772 WSB2Q9NYS7 404 aaPredicted RBP13.93□□□□□ -0.18
DDX56-201ENST00000258772 MRPL15Q9P015 296 aaKnown RBP13.93□□□□□ -0.18
DDX56-201ENST00000258772 A0A1B0GTQ1 180 aa13.92□□□□□ -0.18
DDX56-201ENST00000258772 OR2W5A6NFC9 320 aa13.92□□□□□ -0.18
DDX56-201ENST00000258772 FAM171A2A8MVW0 826 aa13.92□□□□□ -0.18
DDX56-201ENST00000258772 PRR32B1ATL7 298 aa13.92□□□□□ -0.18
DDX56-201ENST00000258772 SSNA1O43805 119 aa13.92□□□□□ -0.18
DDX56-201ENST00000258772 GMDSO60547 372 aa13.92□□□□□ -0.18
DDX56-201ENST00000258772 PRAMEF2O60811 474 aa13.92□□□□□ -0.18
DDX56-201ENST00000258772 SLC22A5O76082 557 aa13.92□□□□□ -0.18
DDX56-201ENST00000258772 HPXP02790 462 aa13.92□□□□□ -0.18
DDX56-201ENST00000258772 GRPRP30550 384 aa13.92□□□□□ -0.18
DDX56-201ENST00000258772 UQCRC1P31930 480 aa13.92□□□□□ -0.18
DDX56-201ENST00000258772 CDKN2AP42771 156 aaKnown RBP13.92□□□□□ -0.18
DDX56-201ENST00000258772 GPR3P46089 330 aa13.92□□□□□ -0.18
DDX56-201ENST00000258772 CCR9P51686 369 aa13.92□□□□□ -0.18
DDX56-201ENST00000258772 BTG2P78543 158 aa13.92□□□□□ -0.18
DDX56-201ENST00000258772 ESCO2Q56NI9 601 aa13.92□□□□□ -0.18
DDX56-201ENST00000258772 FAM69AQ5T7M9 428 aa13.92□□□□□ -0.18
DDX56-201ENST00000258772 FCRLAQ7L513 359 aa13.92□□□□□ -0.18
DDX56-201ENST00000258772 MCATQ8IVS2 390 aaKnown RBP13.92□□□□□ -0.18
DDX56-201ENST00000258772 SLC35F3Q8IY50 421 aa13.92□□□□□ -0.18
DDX56-201ENST00000258772 MOSPD2Q8NHP6 518 aa13.92□□□□□ -0.18
DDX56-201ENST00000258772 C16orf52Q8NHV5 167 aa13.92□□□□□ -0.18
DDX56-201ENST00000258772 RGP1Q92546 391 aaPredicted RBP13.92□□□□□ -0.18
DDX56-201ENST00000258772 RNF166Q96A37 237 aaPredicted RBP13.92□□□□□ -0.18
DDX56-201ENST00000258772 SLC25A38Q96DW6 304 aa13.92□□□□□ -0.18
DDX56-201ENST00000258772 GPX7Q96SL4 187 aaPredicted RBP13.92□□□□□ -0.18
DDX56-201ENST00000258772 ALG12Q9BV10 488 aa13.92□□□□□ -0.18
DDX56-201ENST00000258772 C20orf85Q9H1P6 137 aa13.92□□□□□ -0.18
DDX56-201ENST00000258772 PLEKHA1Q9HB21 404 aa13.92□□□□□ -0.18
DDX56-201ENST00000258772 DLL4Q9NR61 685 aa13.92□□□□□ -0.18
DDX56-201ENST00000258772 NKIRAS2Q9NYR9 191 aa13.92□□□□□ -0.18
DDX56-201ENST00000258772 OR10H1Q9Y4A9 318 aa13.92□□□□□ -0.18
DDX56-201ENST00000258772 CLDN16Q9Y5I7 305 aa13.92□□□□□ -0.18
DDX56-201ENST00000258772 RANBP2P49792 3224 aaKnown RBP13.92□□□□□ -0.18
DDX56-201ENST00000258772 A0A1B0GVT2 93 aa13.92□□□□□ -0.18
DDX56-201ENST00000258772 A0A1W2PQ72 361 aa13.92□□□□□ -0.18
DDX56-201ENST00000258772 EPOPA6NHQ4 379 aa13.92□□□□□ -0.18
DDX56-201ENST00000258772 PGDP52209 483 aa13.92□□□□□ -0.18
DDX56-201ENST00000258772 IGLV3-21P80748 117 aaPredicted RBP13.92□□□□□ -0.18
DDX56-201ENST00000258772 LGALSLQ3ZCW2 172 aaPredicted RBP13.92□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms