RNA–Protein interactions for RNA: ENST00000257548.9

USP30-201, Transcript of ubiquitin specific peptidase 30, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP30, Length 3,742 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP30-201ENST00000257548 GOT1L1Q8NHS2 421 aaPredicted RBP11.38□□□□□ -0.59
USP30-201ENST00000257548 ZNF563Q8TA94 476 aa11.38□□□□□ -0.59
USP30-201ENST00000257548 PTP4A1Q93096 173 aa11.38□□□□□ -0.59
USP30-201ENST00000257548 KLHL15Q96M94 604 aa11.38□□□□□ -0.59
USP30-201ENST00000257548 SMIM3Q9BZL3 60 aa11.38□□□□□ -0.59
USP30-201ENST00000257548 MTHFD2LQ9H903 347 aaPredicted RBP11.38□□□□□ -0.59
USP30-201ENST00000257548 HCFC1R1Q9NWW0 138 aa11.38□□□□□ -0.59
USP30-201ENST00000257548 PCDHB10Q9UN67 800 aa11.38□□□□□ -0.59
USP30-201ENST00000257548 A0A0G2JMZ2 1700 aa11.38□□□□□ -0.59
USP30-201ENST00000257548 LRRC37A2A6NM11 1700 aa11.38□□□□□ -0.59
USP30-201ENST00000257548 SYT5O00445 386 aa11.38□□□□□ -0.59
USP30-201ENST00000257548 PLGP00747 810 aaPredicted RBP11.38□□□□□ -0.59
USP30-201ENST00000257548 TACSTD2P09758 323 aa11.38□□□□□ -0.59
USP30-201ENST00000257548 LIMS1P48059 325 aa11.38□□□□□ -0.59
USP30-201ENST00000257548 TMEM255AQ5JRV8 349 aa11.38□□□□□ -0.59
USP30-201ENST00000257548 B3GNTL1Q67FW5 361 aaPredicted RBP11.38□□□□□ -0.59
USP30-201ENST00000257548 OR10K2Q6IF99 312 aa11.38□□□□□ -0.59
USP30-201ENST00000257548 LCN10Q6JVE6 187 aa11.38□□□□□ -0.59
USP30-201ENST00000257548 BAIAP2L2Q6UXY1 529 aa11.38□□□□□ -0.59
USP30-201ENST00000257548 FAM181AQ8N9Y4 354 aa11.38□□□□□ -0.59
USP30-201ENST00000257548 MORN4Q8NDC4 146 aa11.38□□□□□ -0.59
USP30-201ENST00000257548 OR11G2Q8NGC1 345 aa11.38□□□□□ -0.59
USP30-201ENST00000257548 C2orf15Q8WU43 125 aaKnown RBP11.38□□□□□ -0.59
USP30-201ENST00000257548 C14orf79Q96F83 325 aa11.38□□□□□ -0.59
USP30-201ENST00000257548 KCNK15Q9H427 330 aa11.38□□□□□ -0.59
USP30-201ENST00000257548 C6orf106Q9H6K1 298 aaPredicted RBP11.38□□□□□ -0.59
USP30-201ENST00000257548 CWH43Q9H720 699 aa11.38□□□□□ -0.59
USP30-201ENST00000257548 FZD3Q9NPG1 666 aa11.38□□□□□ -0.59
USP30-201ENST00000257548 GPN3Q9UHW5 284 aaPredicted RBP11.38□□□□□ -0.59
USP30-201ENST00000257548 ZNF346Q9UL40 294 aaKnown RBP11.38□□□□□ -0.59
USP30-201ENST00000257548 ATXN7L1Q9ULK2 861 aaPredicted RBP11.38□□□□□ -0.59
USP30-201ENST00000257548 PCDHGA5Q9Y5G8 931 aa11.38□□□□□ -0.59
USP30-201ENST00000257548 TRBV23-1A0A0A0MS06 115 aa11.38□□□□□ -0.59
USP30-201ENST00000257548 A0A1B0GUH1 482 aa11.38□□□□□ -0.59
USP30-201ENST00000257548 SLC5A10A0PJK1 596 aa11.38□□□□□ -0.59
USP30-201ENST00000257548 TMEM82A0PJX8 343 aa11.38□□□□□ -0.59
USP30-201ENST00000257548 KDM4EB2RXH2 506 aaPredicted RBP11.38□□□□□ -0.59
USP30-201ENST00000257548 TRIM77I1YAP6 450 aa11.38□□□□□ -0.59
USP30-201ENST00000257548 PRKNO60260 465 aaPredicted RBP11.38□□□□□ -0.59
USP30-201ENST00000257548 ZNF254O75437 659 aa11.38□□□□□ -0.59
USP30-201ENST00000257548 WDPCPO95876 746 aa11.38□□□□□ -0.59
USP30-201ENST00000257548 SLC35G6P0C7Q6 338 aa11.38□□□□□ -0.59
USP30-201ENST00000257548 CAPZA1P52907 286 aa11.38□□□□□ -0.59
USP30-201ENST00000257548 IL13RA1P78552 427 aa11.38□□□□□ -0.59
USP30-201ENST00000257548 PDE7AQ13946 482 aa11.38□□□□□ -0.59
USP30-201ENST00000257548 PDGFRLQ15198 375 aa11.38□□□□□ -0.59
USP30-201ENST00000257548 AVPI1Q5T686 147 aa11.38□□□□□ -0.59
USP30-201ENST00000257548 DCAF12L2Q5VW00 463 aa11.38□□□□□ -0.59
USP30-201ENST00000257548 GLDNQ6ZMI3 551 aaPredicted RBP11.38□□□□□ -0.59
USP30-201ENST00000257548 SLC35D2Q76EJ3 337 aa11.38□□□□□ -0.59
USP30-201ENST00000257548 CPXM2Q8N436 756 aa11.38□□□□□ -0.59
USP30-201ENST00000257548 LNX2Q8N448 690 aa11.38□□□□□ -0.59
USP30-201ENST00000257548 RFLNBQ8N5W9 214 aa11.38□□□□□ -0.59
USP30-201ENST00000257548 OR4C16Q8NGL9 310 aa11.38□□□□□ -0.59
USP30-201ENST00000257548 MAFIPQ8WZ33 124 aa11.38□□□□□ -0.59
USP30-201ENST00000257548 ARL11Q969Q4 196 aa11.38□□□□□ -0.59
USP30-201ENST00000257548 ZBTB8AQ96BR9 441 aa11.38□□□□□ -0.59
USP30-201ENST00000257548 ACTRT3Q9BYD9 372 aa11.38□□□□□ -0.59
USP30-201ENST00000257548 CHMP1AQ9HD42 196 aaPredicted RBP11.38□□□□□ -0.59
USP30-201ENST00000257548 MAN2C1Q9NTJ4 1040 aa11.38□□□□□ -0.59
USP30-201ENST00000257548 ACSS1Q9NUB1 689 aaPredicted RBP11.38□□□□□ -0.59
USP30-201ENST00000257548 SLC27A6Q9Y2P4 619 aa11.38□□□□□ -0.59
USP30-201ENST00000257548 FAM96BQ9Y3D0 163 aa11.38□□□□□ -0.59
USP30-201ENST00000257548 PLXNA1Q9UIW2 1896 aa11.38□□□□□ -0.59
USP30-201ENST00000257548 F13BP05160 661 aa11.37□□□□□ -0.59
USP30-201ENST00000257548 ZDHHC11BP0C7U3 371 aa11.37□□□□□ -0.59
USP30-201ENST00000257548 TMIGD3P0DMS9 266 aaPredicted RBP11.37□□□□□ -0.59
USP30-201ENST00000257548 SELPP16109 830 aa11.37□□□□□ -0.59
USP30-201ENST00000257548 RORAP35398 523 aa11.37□□□□□ -0.59
USP30-201ENST00000257548 TAS2R20P59543 309 aa11.37□□□□□ -0.59
USP30-201ENST00000257548 ACTA2P62736 377 aa11.37□□□□□ -0.59
USP30-201ENST00000257548 ACTG2P63267 376 aa11.37□□□□□ -0.59
USP30-201ENST00000257548 MANEAQ5SRI9 462 aa11.37□□□□□ -0.59
USP30-201ENST00000257548 CAMKMTQ7Z624 323 aa11.37□□□□□ -0.59
USP30-201ENST00000257548 PLPP7Q8NBV4 271 aa11.37□□□□□ -0.59
USP30-201ENST00000257548 OR52H1Q8NGJ2 320 aa11.37□□□□□ -0.59
USP30-201ENST00000257548 OR1S2Q8NGQ3 325 aa11.37□□□□□ -0.59
USP30-201ENST00000257548 OR8D1Q8WZ84 308 aa11.37□□□□□ -0.59
USP30-201ENST00000257548 CNRIP1Q96F85 164 aaPredicted RBP11.37□□□□□ -0.59
USP30-201ENST00000257548 PEX11GQ96HA9 241 aa11.37□□□□□ -0.59
USP30-201ENST00000257548 POFUT1Q9H488 388 aa11.37□□□□□ -0.59
USP30-201ENST00000257548 DZANK1Q9NVP4 752 aa11.37□□□□□ -0.59
USP30-201ENST00000257548 ZNF443Q9Y2A4 671 aaPredicted RBP11.37□□□□□ -0.59
USP30-201ENST00000257548 POLR1DQ9Y2S0 133 aa11.37□□□□□ -0.59
USP30-201ENST00000257548 CHD5Q8TDI0 1954 aa11.37□□□□□ -0.59
USP30-201ENST00000257548 DSPPQ9NZW4 1301 aa11.37□□□□□ -0.59
USP30-201ENST00000257548 A0A1W2PR48 441 aa11.37□□□□□ -0.59
USP30-201ENST00000257548 PRAMEF27A3QJZ7 478 aa11.37□□□□□ -0.59
USP30-201ENST00000257548 OR5H14A6NHG9 310 aa11.37□□□□□ -0.59
USP30-201ENST00000257548 IFITM5A6NNB3 132 aa11.37□□□□□ -0.59
USP30-201ENST00000257548 B4GALT2O60909 372 aa11.37□□□□□ -0.59
USP30-201ENST00000257548 SERPINA5P05154 406 aa11.37□□□□□ -0.59
USP30-201ENST00000257548 HOXB3P14651 431 aaPredicted RBP11.37□□□□□ -0.59
USP30-201ENST00000257548 HIST1H1TP22492 207 aaPredicted RBP11.37□□□□□ -0.59
USP30-201ENST00000257548 TMEM205Q6UW68 189 aa11.37□□□□□ -0.59
USP30-201ENST00000257548 TTLL10Q6ZVT0 673 aa11.37□□□□□ -0.59
USP30-201ENST00000257548 EIF5A2Q9GZV4 153 aaKnown RBP11.37□□□□□ -0.59
USP30-201ENST00000257548 RXFP3Q9NSD7 469 aa11.37□□□□□ -0.59
USP30-201ENST00000257548 SBF1O95248 1867 aa11.37□□□□□ -0.59
USP30-201ENST00000257548 TRIOO75962 3097 aa11.37□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms