RNA–Protein interactions for RNA: ENST00000257290.9

PDGFRA-201, Transcript of platelet derived growth factor receptor alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDGFRA, Length 6,576 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRA-201ENST00000257290 CSNK1G1Q9HCP0 422 aa6.29□□□□□ -1.4
PDGFRA-201ENST00000257290 J3KR12 359 aa6.29□□□□□ -1.4
PDGFRA-201ENST00000257290 ARPC3O15145 178 aa6.29□□□□□ -1.4
PDGFRA-201ENST00000257290 GRAP2O75791 330 aa6.29□□□□□ -1.4
PDGFRA-201ENST00000257290 CNMDO75829 334 aa6.29□□□□□ -1.4
PDGFRA-201ENST00000257290 HIST1H2ABP04908 130 aa6.29□□□□□ -1.4
PDGFRA-201ENST00000257290 CD99P14209 185 aa6.29□□□□□ -1.4
PDGFRA-201ENST00000257290 PRKCHP24723 683 aa6.29□□□□□ -1.4
PDGFRA-201ENST00000257290 SOX18P35713 384 aa6.29□□□□□ -1.4
PDGFRA-201ENST00000257290 NOVP48745 357 aa6.29□□□□□ -1.4
PDGFRA-201ENST00000257290 CRYBB1P53674 252 aaPredicted RBP6.29□□□□□ -1.4
PDGFRA-201ENST00000257290 LTC4SQ16873 150 aa6.29□□□□□ -1.4
PDGFRA-201ENST00000257290 DCST1Q5T197 706 aa6.29□□□□□ -1.4
PDGFRA-201ENST00000257290 ZNF648Q5T619 568 aaPredicted RBP6.29□□□□□ -1.4
PDGFRA-201ENST00000257290 HIST3H2AQ7L7L0 130 aa6.29□□□□□ -1.4
PDGFRA-201ENST00000257290 HIST1H2ACQ93077 130 aa6.29□□□□□ -1.4
PDGFRA-201ENST00000257290 APH1AQ96BI3 265 aa6.29□□□□□ -1.4
PDGFRA-201ENST00000257290 PEBP4Q96S96 227 aa6.29□□□□□ -1.4
PDGFRA-201ENST00000257290 PRRX2Q99811 253 aa6.29□□□□□ -1.4
PDGFRA-201ENST00000257290 CABLES2Q9BTV7 478 aa6.29□□□□□ -1.4
PDGFRA-201ENST00000257290 CHST11Q9NPF2 352 aa6.29□□□□□ -1.4
PDGFRA-201ENST00000257290 DLL4Q9NR61 685 aa6.29□□□□□ -1.4
PDGFRA-201ENST00000257290 MMP24Q9Y5R2 645 aa6.29□□□□□ -1.4
PDGFRA-201ENST00000257290 BCL2L11O43521 198 aa6.29□□□□□ -1.4
PDGFRA-201ENST00000257290 MFSD11O43934 449 aa6.29□□□□□ -1.4
PDGFRA-201ENST00000257290 SCN2BO60939 215 aa6.29□□□□□ -1.4
PDGFRA-201ENST00000257290 OR13C7P0DN81 318 aa6.29□□□□□ -1.4
PDGFRA-201ENST00000257290 NOGQ13253 232 aa6.29□□□□□ -1.4
PDGFRA-201ENST00000257290 PTGES3Q15185 160 aaKnown RBP6.29□□□□□ -1.4
PDGFRA-201ENST00000257290 PTPRNQ16849 979 aa6.29□□□□□ -1.4
PDGFRA-201ENST00000257290 TMEM201Q5SNT2 666 aa6.29□□□□□ -1.4
PDGFRA-201ENST00000257290 DNLZQ5SXM8 178 aa6.29□□□□□ -1.4
PDGFRA-201ENST00000257290 FAM182AQ5T1J6 154 aa6.29□□□□□ -1.4
PDGFRA-201ENST00000257290 TMEM268Q5VZI3 342 aa6.29□□□□□ -1.4
PDGFRA-201ENST00000257290 DPY19L2P2Q6ZN68 376 aa6.29□□□□□ -1.4
PDGFRA-201ENST00000257290 SLC16A12Q6ZSM3 486 aa6.29□□□□□ -1.4
PDGFRA-201ENST00000257290 TMPRSS11BQ86T26 416 aa6.29□□□□□ -1.4
PDGFRA-201ENST00000257290 LRRC18Q8N456 261 aa6.29□□□□□ -1.4
PDGFRA-201ENST00000257290 TMEM159Q96B96 161 aa6.29□□□□□ -1.4
PDGFRA-201ENST00000257290 AKR1E2Q96JD6 320 aa6.29□□□□□ -1.4
PDGFRA-201ENST00000257290 TEPSINQ96N21 525 aa6.29□□□□□ -1.4
PDGFRA-201ENST00000257290 SLC30A3Q99726 388 aa6.29□□□□□ -1.4
PDGFRA-201ENST00000257290 NTPCRQ9BSD7 190 aaKnown RBP6.29□□□□□ -1.4
PDGFRA-201ENST00000257290 TSSK6Q9BXA6 273 aa6.29□□□□□ -1.4
PDGFRA-201ENST00000257290 DERL2Q9GZP9 239 aa6.29□□□□□ -1.4
PDGFRA-201ENST00000257290 MEGF9Q9H1U4 602 aa6.29□□□□□ -1.4
PDGFRA-201ENST00000257290 C2orf42Q9NWW7 574 aa6.29□□□□□ -1.4
PDGFRA-201ENST00000257290 ZNF226Q9NYT6 803 aa6.29□□□□□ -1.4
PDGFRA-201ENST00000257290 CNOT2Q9NZN8 540 aaKnown RBP6.29□□□□□ -1.4
PDGFRA-201ENST00000257290 HSPB7Q9UBY9 170 aa6.29□□□□□ -1.4
PDGFRA-201ENST00000257290 KLF2Q9Y5W3 355 aaPredicted RBP6.29□□□□□ -1.4
PDGFRA-201ENST00000257290 ACOT8O14734 319 aa6.28□□□□□ -1.4
PDGFRA-201ENST00000257290 PNMTP11086 282 aa6.28□□□□□ -1.4
PDGFRA-201ENST00000257290 CYP2F1P24903 491 aa6.28□□□□□ -1.4
PDGFRA-201ENST00000257290 OR1E1P30953 314 aa6.28□□□□□ -1.4
PDGFRA-201ENST00000257290 PNLIPRP3Q17RR3 467 aa6.28□□□□□ -1.4
PDGFRA-201ENST00000257290 SLC35D3Q5M8T2 416 aa6.28□□□□□ -1.4
PDGFRA-201ENST00000257290 CPTPQ5TA50 214 aa6.28□□□□□ -1.4
PDGFRA-201ENST00000257290 RERGQ96A58 199 aaPredicted RBP6.28□□□□□ -1.4
PDGFRA-201ENST00000257290 MARVELD1Q9BSK0 173 aa6.28□□□□□ -1.4
PDGFRA-201ENST00000257290 JAM3Q9BX67 310 aa6.28□□□□□ -1.4
PDGFRA-201ENST00000257290 OR12D3Q9UGF7 316 aa6.28□□□□□ -1.4
PDGFRA-201ENST00000257290 A0A1W2PNV4 684 aa6.28□□□□□ -1.4
PDGFRA-201ENST00000257290 SOWAHBA6NEL2 793 aa6.28□□□□□ -1.4
PDGFRA-201ENST00000257290 TMEM88BA6NKF7 163 aa6.28□□□□□ -1.4
PDGFRA-201ENST00000257290 C9JVG2 144 aa6.28□□□□□ -1.4
PDGFRA-201ENST00000257290 ERAL1O75616 437 aaKnown RBP6.28□□□□□ -1.4
PDGFRA-201ENST00000257290 TRAPPC6AO75865 159 aa6.28□□□□□ -1.4
PDGFRA-201ENST00000257290 EGFP01133 1207 aa6.28□□□□□ -1.4
PDGFRA-201ENST00000257290 VIPP01282 170 aa6.28□□□□□ -1.4
PDGFRA-201ENST00000257290 PTH2RP49190 550 aa6.28□□□□□ -1.4
PDGFRA-201ENST00000257290 KLF1Q13351 362 aaPredicted RBP6.28□□□□□ -1.4
PDGFRA-201ENST00000257290 MICBQ29980 383 aa6.28□□□□□ -1.4
PDGFRA-201ENST00000257290 MPEG1Q2M385 716 aa6.28□□□□□ -1.4
PDGFRA-201ENST00000257290 SLC35G1Q2M3R5 365 aa6.28□□□□□ -1.4
PDGFRA-201ENST00000257290 TEX44Q53QW1 395 aa6.28□□□□□ -1.4
PDGFRA-201ENST00000257290 OR13C9Q8NGT0 318 aa6.28□□□□□ -1.4
PDGFRA-201ENST00000257290 KIRREL1Q96J84 757 aa6.28□□□□□ -1.4
PDGFRA-201ENST00000257290 ZNF670Q9BS34 389 aa6.28□□□□□ -1.4
PDGFRA-201ENST00000257290 CDT1Q9H211 546 aa6.28□□□□□ -1.4
PDGFRA-201ENST00000257290 FAM124BQ9H5Z6 455 aaPredicted RBP6.28□□□□□ -1.4
PDGFRA-201ENST00000257290 PLSCR4Q9NRQ2 329 aa6.28□□□□□ -1.4
PDGFRA-201ENST00000257290 TBC1D3KA0A087X1G2 549 aa6.28□□□□□ -1.4
PDGFRA-201ENST00000257290 CCDC187A0A096LP49 1063 aa6.28□□□□□ -1.4
PDGFRA-201ENST00000257290 FOXE1O00358 373 aaPredicted RBP6.28□□□□□ -1.4
PDGFRA-201ENST00000257290 GABRA1P14867 456 aa6.28□□□□□ -1.4
PDGFRA-201ENST00000257290 GLB1P16278 677 aa6.28□□□□□ -1.4
PDGFRA-201ENST00000257290 CD200P41217 278 aa6.28□□□□□ -1.4
PDGFRA-201ENST00000257290 RFX3P48380 749 aa6.28□□□□□ -1.4
PDGFRA-201ENST00000257290 IL24Q13007 206 aa6.28□□□□□ -1.4
PDGFRA-201ENST00000257290 LGALSLQ3ZCW2 172 aaPredicted RBP6.28□□□□□ -1.4
PDGFRA-201ENST00000257290 TMEM205Q6UW68 189 aa6.28□□□□□ -1.4
PDGFRA-201ENST00000257290 OR2W3Q7Z3T1 314 aa6.28□□□□□ -1.4
PDGFRA-201ENST00000257290 SERINC2Q96SA4 455 aa6.28□□□□□ -1.4
PDGFRA-201ENST00000257290 SPSB2Q99619 263 aa6.28□□□□□ -1.4
PDGFRA-201ENST00000257290 OR2J1Q9GZK6 312 aa6.28□□□□□ -1.4
PDGFRA-201ENST00000257290 ALG9Q9H6U8 611 aa6.28□□□□□ -1.4
PDGFRA-201ENST00000257290 TESQ9UGI8 421 aaKnown RBP6.28□□□□□ -1.4
PDGFRA-201ENST00000257290 OR52A1Q9UKL2 312 aa6.28□□□□□ -1.4
PDGFRA-201ENST00000257290 ZNF214Q9UL59 606 aaPredicted RBP6.28□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms