RNA–Protein interactions for RNA: ENST00000252816.10

LSM4-201, Transcript of LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2 BASIC

Gene LSM4, Length 986 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM4-201ENST00000252816 RBM45Q8IUH3 476 aaKnown RBP20.23■□□□□ 0.83
LSM4-201ENST00000252816 PCYOX1LQ8NBM8 494 aa20.23■□□□□ 0.83
LSM4-201ENST00000252816 RCN3Q96D15 328 aa20.23■□□□□ 0.83
LSM4-201ENST00000252816 SLC47A1Q96FL8 570 aa20.23■□□□□ 0.83
LSM4-201ENST00000252816 MCHR1Q99705 422 aa20.23■□□□□ 0.83
LSM4-201ENST00000252816 TMEM204Q9BSN7 226 aa20.23■□□□□ 0.83
LSM4-201ENST00000252816 SLC7A10Q9NS82 523 aa20.23■□□□□ 0.83
LSM4-201ENST00000252816 GID8Q9NWU2 228 aa20.23■□□□□ 0.83
LSM4-201ENST00000252816 RAD51DO75771 328 aa20.22■□□□□ 0.83
LSM4-201ENST00000252816 PTNP21246 168 aa20.22■□□□□ 0.83
LSM4-201ENST00000252816 CREB3L2Q70SY1 520 aa20.22■□□□□ 0.83
LSM4-201ENST00000252816 AAED1Q7RTV5 226 aa20.22■□□□□ 0.83
LSM4-201ENST00000252816 EPHX4Q8IUS5 362 aa20.22■□□□□ 0.83
LSM4-201ENST00000252816 KDM8Q8N371 416 aa20.22■□□□□ 0.83
LSM4-201ENST00000252816 RNF217Q8TC41 542 aa20.22■□□□□ 0.83
LSM4-201ENST00000252816 TAS2R16Q9NYV7 291 aa20.22■□□□□ 0.83
LSM4-201ENST00000252816 SELENONQ9NZV5 590 aa20.22■□□□□ 0.83
LSM4-201ENST00000252816 RASD1Q9Y272 281 aa20.22■□□□□ 0.83
LSM4-201ENST00000252816 TRAV36DV7A0A075B6V5 113 aa20.21■□□□□ 0.83
LSM4-201ENST00000252816 OR5H1A6NKK0 313 aa20.21■□□□□ 0.83
LSM4-201ENST00000252816 CCT8L1PA6NM43 557 aa20.21■□□□□ 0.83
LSM4-201ENST00000252816 FMO6PO60774 539 aa20.21■□□□□ 0.83
LSM4-201ENST00000252816 VAMP5O95183 116 aa20.21■□□□□ 0.83
LSM4-201ENST00000252816 PPA1Q15181 289 aa20.21■□□□□ 0.83
LSM4-201ENST00000252816 TIMM23BQ5SRD1 257 aa20.21■□□□□ 0.83
LSM4-201ENST00000252816 NCMAPQ5T1S8 102 aa20.21■□□□□ 0.83
LSM4-201ENST00000252816 FAM69AQ5T7M9 428 aa20.21■□□□□ 0.83
LSM4-201ENST00000252816 C5orf46Q6UWT4 87 aa20.21■□□□□ 0.83
LSM4-201ENST00000252816 SPATA21Q7Z572 469 aa20.21■□□□□ 0.83
LSM4-201ENST00000252816 TSPYL5Q86VY4 417 aaPredicted RBP20.21■□□□□ 0.83
LSM4-201ENST00000252816 TREML1Q86YW5 311 aa20.21■□□□□ 0.83
LSM4-201ENST00000252816 VANGL1Q8TAA9 524 aaPredicted RBP20.21■□□□□ 0.83
LSM4-201ENST00000252816 ELAC2Q9BQ52 826 aaKnown RBP20.21■□□□□ 0.83
LSM4-201ENST00000252816 UPB1Q9UBR1 384 aa20.21■□□□□ 0.83
LSM4-201ENST00000252816 RAI1Q7Z5J4 1906 aaPredicted RBP20.21■□□□□ 0.83
LSM4-201ENST00000252816 CIB4A0PJX0 185 aa20.2■□□□□ 0.82
LSM4-201ENST00000252816 M0R082 166 aa20.2■□□□□ 0.82
LSM4-201ENST00000252816 OR2T1O43869 369 aa20.2■□□□□ 0.82
LSM4-201ENST00000252816 CCDC22O60826 627 aa20.2■□□□□ 0.82
LSM4-201ENST00000252816 THY1P04216 161 aa20.2■□□□□ 0.82
LSM4-201ENST00000252816 COX4I1P13073 169 aa20.2■□□□□ 0.82
LSM4-201ENST00000252816 CBLP22681 906 aa20.2■□□□□ 0.82
LSM4-201ENST00000252816 GRPRP30550 384 aa20.2■□□□□ 0.82
LSM4-201ENST00000252816 LTBQ06643 244 aa20.2■□□□□ 0.82
LSM4-201ENST00000252816 SWT1Q5T5J6 900 aaKnown RBP20.2■□□□□ 0.82
LSM4-201ENST00000252816 C9orf135Q5VTT2 229 aa20.2■□□□□ 0.82
LSM4-201ENST00000252816 ZNF613Q6PF04 617 aa20.2■□□□□ 0.82
LSM4-201ENST00000252816 P2RY8Q86VZ1 359 aa20.2■□□□□ 0.82
LSM4-201ENST00000252816 RP9Q8TA86 221 aaKnown RBP20.2■□□□□ 0.82
LSM4-201ENST00000252816 ZNF417Q8TAU3 575 aa20.2■□□□□ 0.82
LSM4-201ENST00000252816 SLC26A7Q8TE54 656 aa20.2■□□□□ 0.82
LSM4-201ENST00000252816 ZNF587Q96SQ5 575 aaPredicted RBP20.2■□□□□ 0.82
LSM4-201ENST00000252816 SLCO5A1Q9H2Y9 848 aa20.2■□□□□ 0.82
LSM4-201ENST00000252816 NGBQ9NPG2 151 aa20.2■□□□□ 0.82
LSM4-201ENST00000252816 NPAP1Q9NZP6 1156 aa20.2■□□□□ 0.82
LSM4-201ENST00000252816 B3GAT1Q9P2W7 334 aa20.2■□□□□ 0.82
LSM4-201ENST00000252816 VPS13CQ709C8 3753 aa20.19■□□□□ 0.82
LSM4-201ENST00000252816 DPRXA6NFQ7 191 aa20.19■□□□□ 0.82
LSM4-201ENST00000252816 CPSF4LA6NMK7 179 aaKnown RBP20.19■□□□□ 0.82
LSM4-201ENST00000252816 LYPD3O95274 346 aa20.19■□□□□ 0.82
LSM4-201ENST00000252816 GTF2E2P29084 291 aaKnown RBP20.19■□□□□ 0.82
LSM4-201ENST00000252816 SELENOPP49908 381 aa20.19■□□□□ 0.82
LSM4-201ENST00000252816 LGALS3BPQ08380 585 aa20.19■□□□□ 0.82
LSM4-201ENST00000252816 VEZF1Q14119 521 aa20.19■□□□□ 0.82
LSM4-201ENST00000252816 GABRA6Q16445 453 aa20.19■□□□□ 0.82
LSM4-201ENST00000252816 ENTPD8Q5MY95 495 aa20.19■□□□□ 0.82
LSM4-201ENST00000252816 ERICH5Q6P6B1 374 aa20.19■□□□□ 0.82
LSM4-201ENST00000252816 LINC00114Q6XXX2 140 aa20.19■□□□□ 0.82
LSM4-201ENST00000252816 WDR88Q6ZMY6 472 aa20.19■□□□□ 0.82
LSM4-201ENST00000252816 C20orf204Q6ZNR8 217 aa20.19■□□□□ 0.82
LSM4-201ENST00000252816 MUCL1Q96DR8 90 aa20.19■□□□□ 0.82
LSM4-201ENST00000252816 MUS81Q96NY9 551 aa20.19■□□□□ 0.82
LSM4-201ENST00000252816 BEX4Q9NWD9 120 aaPredicted RBP20.19■□□□□ 0.82
LSM4-201ENST00000252816 CMTM6Q9NX76 183 aa20.19■□□□□ 0.82
LSM4-201ENST00000252816 GMPR2Q9P2T1 348 aaKnown RBP20.19■□□□□ 0.82
LSM4-201ENST00000252816 CADP27708 2225 aa20.19■□□□□ 0.82
LSM4-201ENST00000252816 ZNF469Q96JG9 3925 aaPredicted RBP20.18■□□□□ 0.82
LSM4-201ENST00000252816 MED13LQ71F56 2210 aa20.18■□□□□ 0.82
LSM4-201ENST00000252816 FAM220BPB1ANY3 271 aa20.18■□□□□ 0.82
LSM4-201ENST00000252816 AIM2O14862 343 aa20.18■□□□□ 0.82
LSM4-201ENST00000252816 BGLAPP02818 100 aa20.18■□□□□ 0.82
LSM4-201ENST00000252816 GYS2P54840 703 aa20.18■□□□□ 0.82
LSM4-201ENST00000252816 BSPH1Q075Z2 132 aa20.18■□□□□ 0.82
LSM4-201ENST00000252816 OR52N5Q8NH56 324 aa20.18■□□□□ 0.82
LSM4-201ENST00000252816 LILRB1Q8NHL6 650 aaPredicted RBP20.18■□□□□ 0.82
LSM4-201ENST00000252816 ADAMTS16Q8TE57 1224 aa20.18■□□□□ 0.82
LSM4-201ENST00000252816 MOGAT1Q96PD6 335 aa20.18■□□□□ 0.82
LSM4-201ENST00000252816 TMEM43Q9BTV4 400 aa20.18■□□□□ 0.82
LSM4-201ENST00000252816 AMBRA1Q9C0C7 1298 aa20.18■□□□□ 0.82
LSM4-201ENST00000252816 FAM107BQ9H098 131 aa20.18■□□□□ 0.82
LSM4-201ENST00000252816 PCDHAC1Q9H158 963 aa20.18■□□□□ 0.82
LSM4-201ENST00000252816 ESRP2Q9H6T0 727 aaKnown RBP20.18■□□□□ 0.82
LSM4-201ENST00000252816 B3GALT5Q9Y2C3 310 aa20.18■□□□□ 0.82
LSM4-201ENST00000252816 RNF115Q9Y4L5 304 aa20.18■□□□□ 0.82
LSM4-201ENST00000252816 SLC25A15Q9Y619 301 aa20.18■□□□□ 0.82
LSM4-201ENST00000252816 A0A1W2PR80 420 aa20.17■□□□□ 0.82
LSM4-201ENST00000252816 LRRN3E7EW58 273 aa20.17■□□□□ 0.82
LSM4-201ENST00000252816 HS3ST1O14792 307 aa20.17■□□□□ 0.82
LSM4-201ENST00000252816 CLOCKO15516 846 aa20.17■□□□□ 0.82
LSM4-201ENST00000252816 CHP2O43745 196 aa20.17■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms