RNA–Protein interactions for RNA: ENST00000252108.7

UBE4A-201, Transcript of ubiquitination factor E4A, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene UBE4A, Length 6,103 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4A-201ENST00000252108 SIDT1Q9NXL6 827 aaKnown RBP3.83□□□□□ -1.8
UBE4A-201ENST00000252108 IKZF2Q9UKS7 526 aa3.83□□□□□ -1.8
UBE4A-201ENST00000252108 A0A0B4J293 547 aa3.82□□□□□ -1.8
UBE4A-201ENST00000252108 A6NL46 340 aa3.82□□□□□ -1.8
UBE4A-201ENST00000252108 H3BMH7 237 aa3.82□□□□□ -1.8
UBE4A-201ENST00000252108 CLDN4O14493 209 aa3.82□□□□□ -1.8
UBE4A-201ENST00000252108 CYB5AP00167 134 aa3.82□□□□□ -1.8
UBE4A-201ENST00000252108 APOC1P02654 83 aa3.82□□□□□ -1.8
UBE4A-201ENST00000252108 HOXD11P31277 338 aaPredicted RBP3.82□□□□□ -1.8
UBE4A-201ENST00000252108 BLOC1S1P78537 153 aa3.82□□□□□ -1.8
UBE4A-201ENST00000252108 OC90Q02509 493 aaPredicted RBP3.82□□□□□ -1.8
UBE4A-201ENST00000252108 DUSP8Q13202 625 aa3.82□□□□□ -1.8
UBE4A-201ENST00000252108 HTR4Q13639 388 aa3.82□□□□□ -1.8
UBE4A-201ENST00000252108 RAB11BQ15907 218 aa3.82□□□□□ -1.8
UBE4A-201ENST00000252108 GSG1Q2KHT4 349 aa3.82□□□□□ -1.8
UBE4A-201ENST00000252108 ZNF800Q2TB10 664 aaPredicted RBP eCLIP3.82□□□□□ -1.8
UBE4A-201ENST00000252108 MED25Q71SY5 747 aa3.82□□□□□ -1.8
UBE4A-201ENST00000252108 C12orf45Q8N5I9 185 aaPredicted RBP3.82□□□□□ -1.8
UBE4A-201ENST00000252108 MFSD9Q8NBP5 474 aa3.82□□□□□ -1.8
UBE4A-201ENST00000252108 OR2A1Q8NGT9 310 aa3.82□□□□□ -1.8
UBE4A-201ENST00000252108 KISS1RQ969F8 398 aaPredicted RBP3.82□□□□□ -1.8
UBE4A-201ENST00000252108 COL26A1Q96A83 441 aa3.82□□□□□ -1.8
UBE4A-201ENST00000252108 SMIM19Q96E16 107 aa3.82□□□□□ -1.8
UBE4A-201ENST00000252108 RNF31Q96EP0 1072 aa3.82□□□□□ -1.8
UBE4A-201ENST00000252108 C4orf36Q96KX1 117 aa3.82□□□□□ -1.8
UBE4A-201ENST00000252108 ASB16Q96NS5 453 aa3.82□□□□□ -1.8
UBE4A-201ENST00000252108 PRAP1Q96NZ9 151 aa3.82□□□□□ -1.8
UBE4A-201ENST00000252108 TBX5Q99593 518 aa3.82□□□□□ -1.8
UBE4A-201ENST00000252108 PRRX2Q99811 253 aa3.82□□□□□ -1.8
UBE4A-201ENST00000252108 GHITMQ9H3K2 345 aa3.82□□□□□ -1.8
UBE4A-201ENST00000252108 GLIPR2Q9H4G4 154 aa3.82□□□□□ -1.8
UBE4A-201ENST00000252108 ERVMER34-1Q9H9K5 563 aa3.82□□□□□ -1.8
UBE4A-201ENST00000252108 Q9N2J8 555 aa3.82□□□□□ -1.8
UBE4A-201ENST00000252108 IL23AQ9NPF7 189 aa3.82□□□□□ -1.8
UBE4A-201ENST00000252108 SLC22A11Q9NSA0 550 aa3.82□□□□□ -1.8
UBE4A-201ENST00000252108 THAP10Q9P2Z0 257 aaPredicted RBP3.82□□□□□ -1.8
UBE4A-201ENST00000252108 ZNF223Q9UK11 482 aaPredicted RBP3.82□□□□□ -1.8
UBE4A-201ENST00000252108 FBXL3Q9UKT7 428 aa3.82□□□□□ -1.8
UBE4A-201ENST00000252108 GPR52Q9Y2T5 361 aa3.82□□□□□ -1.8
UBE4A-201ENST00000252108 TMEM212A6NML5 194 aa3.82□□□□□ -1.8
UBE4A-201ENST00000252108 ERVH48-1M5A8F1 160 aa3.82□□□□□ -1.8
UBE4A-201ENST00000252108 APOC3P02656 99 aa3.82□□□□□ -1.8
UBE4A-201ENST00000252108 CD3GP09693 182 aa3.82□□□□□ -1.8
UBE4A-201ENST00000252108 TPT1P13693 172 aaKnown RBP3.82□□□□□ -1.8
UBE4A-201ENST00000252108 GTF2F2P13984 249 aa3.82□□□□□ -1.8
UBE4A-201ENST00000252108 DNASE1L1P49184 302 aa3.82□□□□□ -1.8
UBE4A-201ENST00000252108 RPS26P62854 115 aaKnown RBP3.82□□□□□ -1.8
UBE4A-201ENST00000252108 LSM11P83369 360 aaKnown RBP eCLIP3.82□□□□□ -1.8
UBE4A-201ENST00000252108 ARHGAP11BQ3KRB8 267 aa3.82□□□□□ -1.8
UBE4A-201ENST00000252108 SMUG1Q53HV7 270 aa3.82□□□□□ -1.8
UBE4A-201ENST00000252108 MANEAQ5SRI9 462 aa3.82□□□□□ -1.8
UBE4A-201ENST00000252108 TSSK4Q6SA08 328 aa3.82□□□□□ -1.8
UBE4A-201ENST00000252108 GLDNQ6ZMI3 551 aaPredicted RBP3.82□□□□□ -1.8
UBE4A-201ENST00000252108 TMUB2Q71RG4 321 aa3.82□□□□□ -1.8
UBE4A-201ENST00000252108 GDF7Q7Z4P5 450 aa3.82□□□□□ -1.8
UBE4A-201ENST00000252108 SHISA5Q8N114 240 aa3.82□□□□□ -1.8
UBE4A-201ENST00000252108 CELF5Q8N6W0 485 aaKnown RBP3.82□□□□□ -1.8
UBE4A-201ENST00000252108 CLRN3Q8NCR9 226 aa3.82□□□□□ -1.8
UBE4A-201ENST00000252108 OR6C4Q8NGE1 309 aa3.82□□□□□ -1.8
UBE4A-201ENST00000252108 MAFAQ8NHW3 353 aaPredicted RBP3.82□□□□□ -1.8
UBE4A-201ENST00000252108 ELP5Q8TE02 316 aa3.82□□□□□ -1.8
UBE4A-201ENST00000252108 FBXW5Q969U6 566 aa3.82□□□□□ -1.8
UBE4A-201ENST00000252108 BPIFA2Q96DR5 249 aa3.82□□□□□ -1.8
UBE4A-201ENST00000252108 ARL5BQ96KC2 179 aa3.82□□□□□ -1.8
UBE4A-201ENST00000252108 DDOQ99489 341 aa3.82□□□□□ -1.8
UBE4A-201ENST00000252108 LMF2Q9BU23 707 aaKnown RBP3.82□□□□□ -1.8
UBE4A-201ENST00000252108 TMEM121BQ9BXQ6 578 aaPredicted RBP3.82□□□□□ -1.8
UBE4A-201ENST00000252108 ZCCHC4Q9H5U6 513 aa3.82□□□□□ -1.8
UBE4A-201ENST00000252108 EGLN3Q9H6Z9 239 aa3.82□□□□□ -1.8
UBE4A-201ENST00000252108 NANSQ9NR45 359 aa3.82□□□□□ -1.8
UBE4A-201ENST00000252108 DUSP22Q9NRW4 184 aa3.82□□□□□ -1.8
UBE4A-201ENST00000252108 PILRAQ9UKJ1 303 aa3.82□□□□□ -1.8
UBE4A-201ENST00000252108 SLC7A7Q9UM01 511 aa3.82□□□□□ -1.8
UBE4A-201ENST00000252108 SLC17A4Q9Y2C5 497 aa3.82□□□□□ -1.8
UBE4A-201ENST00000252108 GPSM3Q9Y4H4 160 aa3.82□□□□□ -1.8
UBE4A-201ENST00000252108 LINC01553A4QN01 128 aa3.82□□□□□ -1.8
UBE4A-201ENST00000252108 MAN2B1O00754 1011 aa3.82□□□□□ -1.8
UBE4A-201ENST00000252108 TNFSF14O43557 240 aa3.82□□□□□ -1.8
UBE4A-201ENST00000252108 LCMT2O60294 686 aaKnown RBP3.82□□□□□ -1.8
UBE4A-201ENST00000252108 RDH16O75452 317 aa3.82□□□□□ -1.8
UBE4A-201ENST00000252108 ADH1BP00325 375 aa3.82□□□□□ -1.8
UBE4A-201ENST00000252108 S100A8P05109 93 aa3.82□□□□□ -1.8
UBE4A-201ENST00000252108 ADH5P11766 374 aa3.82□□□□□ -1.8
UBE4A-201ENST00000252108 TBPP20226 339 aa3.82□□□□□ -1.8
UBE4A-201ENST00000252108 CSRP1P21291 193 aaKnown RBP3.82□□□□□ -1.8
UBE4A-201ENST00000252108 SHC1P29353 583 aa3.82□□□□□ -1.8
UBE4A-201ENST00000252108 CHRNB4P30926 498 aa3.82□□□□□ -1.8
UBE4A-201ENST00000252108 PRKXP51817 358 aa3.82□□□□□ -1.8
UBE4A-201ENST00000252108 ZNF169Q14929 603 aaPredicted RBP3.82□□□□□ -1.8
UBE4A-201ENST00000252108 PDGFRLQ15198 375 aa3.82□□□□□ -1.8
UBE4A-201ENST00000252108 ISXQ2M1V0 245 aa3.82□□□□□ -1.8
UBE4A-201ENST00000252108 RNASE12Q5GAN4 147 aaKnown RBP3.82□□□□□ -1.8
UBE4A-201ENST00000252108 EOGTQ5NDL2 527 aa3.82□□□□□ -1.8
UBE4A-201ENST00000252108 SLC48A1Q6P1K1 146 aa3.82□□□□□ -1.8
UBE4A-201ENST00000252108 DPY19L2P2Q6ZN68 376 aa3.82□□□□□ -1.8
UBE4A-201ENST00000252108 CCDC116Q8IYX3 515 aa3.82□□□□□ -1.8
UBE4A-201ENST00000252108 ZNF454Q8N9F8 522 aa3.82□□□□□ -1.8
UBE4A-201ENST00000252108 OR5AK2Q8NH90 309 aa3.82□□□□□ -1.8
UBE4A-201ENST00000252108 KLHL15Q96M94 604 aa3.82□□□□□ -1.8
UBE4A-201ENST00000252108 CNTNAP3BQ96NU0 1288 aa3.82□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms