RNA–Protein interactions for RNA: ENST00000243082.4

HOXC11-201, Transcript of homeobox C11, humanhuman

TSL 3 BASIC

Gene HOXC11, Length 2,039 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC11-201ENST00000243082 ZNF181Q2M3W8 571 aa16.79■□□□□ 0.28
HOXC11-201ENST00000243082 ZNF800Q2TB10 664 aaPredicted RBP eCLIP16.79■□□□□ 0.28
HOXC11-201ENST00000243082 VASH1Q7L8A9 365 aaPredicted RBP16.79■□□□□ 0.28
HOXC11-201ENST00000243082 BMPERQ8N8U9 685 aa16.79■□□□□ 0.28
HOXC11-201ENST00000243082 POMGNT2Q8NAT1 580 aa16.79■□□□□ 0.28
HOXC11-201ENST00000243082 FAM83FQ8NEG4 500 aaPredicted RBP16.79■□□□□ 0.28
HOXC11-201ENST00000243082 ASB15Q8WXK1 588 aa16.79■□□□□ 0.28
HOXC11-201ENST00000243082 C8orf44Q96CB5 159 aa16.79■□□□□ 0.28
HOXC11-201ENST00000243082 CNN2Q99439 309 aaKnown RBP16.79■□□□□ 0.28
HOXC11-201ENST00000243082 CRB3Q9BUF7 120 aa16.79■□□□□ 0.28
HOXC11-201ENST00000243082 FKRPQ9H9S5 495 aa16.79■□□□□ 0.28
HOXC11-201ENST00000243082 UGT2A1Q9Y4X1 527 aa16.79■□□□□ 0.28
HOXC11-201ENST00000243082 PCDHGB6Q9Y5F9 930 aa16.79■□□□□ 0.28
HOXC11-201ENST00000243082 TRBV11-1A0A0K0K1C0 115 aa16.79■□□□□ 0.28
HOXC11-201ENST00000243082 RGS5O15539 181 aa16.79■□□□□ 0.28
HOXC11-201ENST00000243082 TXNDC12O95881 172 aa16.79■□□□□ 0.28
HOXC11-201ENST00000243082 F13BP05160 661 aa16.79■□□□□ 0.28
HOXC11-201ENST00000243082 GTF2E2P29084 291 aaKnown RBP16.79■□□□□ 0.28
HOXC11-201ENST00000243082 SLC26A5P58743 744 aa16.79■□□□□ 0.28
HOXC11-201ENST00000243082 ZFP36L1Q07352 338 aaKnown RBP16.79■□□□□ 0.28
HOXC11-201ENST00000243082 SLC35D3Q5M8T2 416 aa16.79■□□□□ 0.28
HOXC11-201ENST00000243082 LCN1P1Q5VSP4 162 aa16.79■□□□□ 0.28
HOXC11-201ENST00000243082 LEG1Q6P5S2 330 aa16.79■□□□□ 0.28
HOXC11-201ENST00000243082 LAX1Q8IWV1 398 aa16.79■□□□□ 0.28
HOXC11-201ENST00000243082 DTWD2Q8NBA8 298 aa16.79■□□□□ 0.28
HOXC11-201ENST00000243082 CEP19Q96LK0 163 aa16.79■□□□□ 0.28
HOXC11-201ENST00000243082 WDFY2Q96P53 400 aa16.79■□□□□ 0.28
HOXC11-201ENST00000243082 SDHCQ99643 169 aaPredicted RBP16.79■□□□□ 0.28
HOXC11-201ENST00000243082 SMOC1Q9H4F8 434 aa16.79■□□□□ 0.28
HOXC11-201ENST00000243082 POLHQ9Y253 713 aa16.79■□□□□ 0.28
HOXC11-201ENST00000243082 TRAV36DV7A0A075B6V5 113 aa16.78■□□□□ 0.28
HOXC11-201ENST00000243082 SMIM30A4D0T7 59 aa16.78■□□□□ 0.28
HOXC11-201ENST00000243082 SLC35F4A4IF30 521 aa16.78■□□□□ 0.28
HOXC11-201ENST00000243082 DVL2O14641 736 aa16.78■□□□□ 0.28
HOXC11-201ENST00000243082 PLPP2O43688 288 aa16.78■□□□□ 0.28
HOXC11-201ENST00000243082 SYPP08247 313 aa16.78■□□□□ 0.28
HOXC11-201ENST00000243082 OR2T7P0C7T2 308 aa16.78■□□□□ 0.28
HOXC11-201ENST00000243082 ZNF28P17035 718 aa16.78■□□□□ 0.28
HOXC11-201ENST00000243082 SDHAP31040 664 aa16.78■□□□□ 0.28
HOXC11-201ENST00000243082 NAA10P41227 235 aaPredicted RBP16.78■□□□□ 0.28
HOXC11-201ENST00000243082 E2F1Q01094 437 aa16.78■□□□□ 0.28
HOXC11-201ENST00000243082 IL10RAQ13651 578 aa16.78■□□□□ 0.28
HOXC11-201ENST00000243082 LPAL2Q16609 132 aa16.78■□□□□ 0.28
HOXC11-201ENST00000243082 STEAP3Q658P3 488 aa16.78■□□□□ 0.28
HOXC11-201ENST00000243082 PLEKHG7Q6ZR37 379 aa16.78■□□□□ 0.28
HOXC11-201ENST00000243082 NANOGNBQ7Z5D8 188 aa16.78■□□□□ 0.28
HOXC11-201ENST00000243082 ADGRG3Q86Y34 549 aa16.78■□□□□ 0.28
HOXC11-201ENST00000243082 OR2T27Q8NH04 317 aa16.78■□□□□ 0.28
HOXC11-201ENST00000243082 OR8K3Q8NH51 312 aa16.78■□□□□ 0.28
HOXC11-201ENST00000243082 ATOH1Q92858 354 aaPredicted RBP16.78■□□□□ 0.28
HOXC11-201ENST00000243082 HGDQ93099 445 aa16.78■□□□□ 0.28
HOXC11-201ENST00000243082 PTDSS2Q9BVG9 487 aa16.78■□□□□ 0.28
HOXC11-201ENST00000243082 ISPDA4D126 451 aa16.77■□□□□ 0.28
HOXC11-201ENST00000243082 CPNE3O75131 537 aaKnown RBP16.77■□□□□ 0.28
HOXC11-201ENST00000243082 NPIPB7O75200 414 aa16.77■□□□□ 0.28
HOXC11-201ENST00000243082 POLR2HP52434 150 aaKnown RBP16.77■□□□□ 0.28
HOXC11-201ENST00000243082 CAV3P56539 151 aa16.77■□□□□ 0.28
HOXC11-201ENST00000243082 TRA2AQ13595 282 aaKnown RBP eCLIP16.77■□□□□ 0.28
HOXC11-201ENST00000243082 DNASE1L3Q13609 305 aa16.77■□□□□ 0.28
HOXC11-201ENST00000243082 COL28A1Q2UY09 1125 aa16.77■□□□□ 0.28
HOXC11-201ENST00000243082 LINC01590Q5TEZ4 76 aa16.77■□□□□ 0.28
HOXC11-201ENST00000243082 SLC35F2Q8IXU6 374 aa16.77■□□□□ 0.28
HOXC11-201ENST00000243082 EXD3Q8N9H8 876 aa16.77■□□□□ 0.28
HOXC11-201ENST00000243082 MINDY2Q8NBR6 621 aa16.77■□□□□ 0.28
HOXC11-201ENST00000243082 LSM14AQ8ND56 463 aaKnown RBP16.77■□□□□ 0.28
HOXC11-201ENST00000243082 OR5J2Q8NH18 312 aa16.77■□□□□ 0.28
HOXC11-201ENST00000243082 NEIL3Q8TAT5 605 aa16.77■□□□□ 0.28
HOXC11-201ENST00000243082 POLE4Q9NR33 117 aa16.77■□□□□ 0.28
HOXC11-201ENST00000243082 TAS2R10Q9NYW0 307 aa16.77■□□□□ 0.28
HOXC11-201ENST00000243082 CMAHPQ9Y471 501 aa16.77■□□□□ 0.28
HOXC11-201ENST00000243082 TMED7-TICAM2A0A0A6YYA0 188 aa16.77■□□□□ 0.27
HOXC11-201ENST00000243082 TMEM72A0PK05 275 aa16.77■□□□□ 0.27
HOXC11-201ENST00000243082 B4DXG7 233 aa16.77■□□□□ 0.27
HOXC11-201ENST00000243082 LOC110117498-PIK3R3F6TDL0 507 aa16.77■□□□□ 0.27
HOXC11-201ENST00000243082 CASKO14936 926 aa16.77■□□□□ 0.27
HOXC11-201ENST00000243082 SERPINI2O75830 405 aa16.77■□□□□ 0.27
HOXC11-201ENST00000243082 RGS9O75916 674 aaPredicted RBP16.77■□□□□ 0.27
HOXC11-201ENST00000243082 HIST1H2ABP04908 130 aa16.77■□□□□ 0.27
HOXC11-201ENST00000243082 CD53P19397 219 aa16.77■□□□□ 0.27
HOXC11-201ENST00000243082 FAM69BQ5VUD6 431 aa16.77■□□□□ 0.27
HOXC11-201ENST00000243082 ARL9Q6T311 187 aa16.77■□□□□ 0.27
HOXC11-201ENST00000243082 RPTNQ6XPR3 784 aa16.77■□□□□ 0.27
HOXC11-201ENST00000243082 HIST3H2AQ7L7L0 130 aa16.77■□□□□ 0.27
HOXC11-201ENST00000243082 JAZF1Q86VZ6 243 aa16.77■□□□□ 0.27
HOXC11-201ENST00000243082 MISPQ8IVT2 679 aa16.77■□□□□ 0.27
HOXC11-201ENST00000243082 AGBL5Q8NDL9 886 aa16.77■□□□□ 0.27
HOXC11-201ENST00000243082 HIST1H2ACQ93077 130 aa16.77■□□□□ 0.27
HOXC11-201ENST00000243082 DNAJA3Q96EY1 480 aa16.77■□□□□ 0.27
HOXC11-201ENST00000243082 TSPAN32Q96QS1 320 aa16.77■□□□□ 0.27
HOXC11-201ENST00000243082 TTTY10Q9BZA0 68 aa16.77■□□□□ 0.27
HOXC11-201ENST00000243082 MIXL1Q9H2W2 232 aa16.77■□□□□ 0.27
HOXC11-201ENST00000243082 ETAA1Q9NY74 926 aa16.77■□□□□ 0.27
HOXC11-201ENST00000243082 TMED7Q9Y3B3 224 aa16.77■□□□□ 0.27
HOXC11-201ENST00000243082 V9GYH0 126 aa16.77■□□□□ 0.27
HOXC11-201ENST00000243082 WDFY4Q6ZS81 3184 aa16.76■□□□□ 0.27
HOXC11-201ENST00000243082 C2orf72A6NCS6 295 aa16.76■□□□□ 0.27
HOXC11-201ENST00000243082 MAGEB4O15481 346 aaPredicted RBP16.76■□□□□ 0.27
HOXC11-201ENST00000243082 SUSD5O60279 629 aa16.76■□□□□ 0.27
HOXC11-201ENST00000243082 SELENOFO60613 162 aa16.76■□□□□ 0.27
HOXC11-201ENST00000243082 GLCEO94923 617 aa16.76■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms