RNA–Protein interactions for RNA: ENST00000239243.6

MSX2-201, Transcript of msh homeobox 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSX2, Length 2,241 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSX2-201ENST00000239243 TRIM16LQ309B1 348 aa21.14■□□□□ 0.97
MSX2-201ENST00000239243 THAP3Q8WTV1 239 aaPredicted RBP21.14■□□□□ 0.97
MSX2-201ENST00000239243 TMED7-TICAM2A0A0A6YYA0 188 aa21.13■□□□□ 0.97
MSX2-201ENST00000239243 OR6C68A6NDL8 312 aa21.13■□□□□ 0.97
MSX2-201ENST00000239243 LOC110117498-PIK3R3F6TDL0 507 aa21.13■□□□□ 0.97
MSX2-201ENST00000239243 LDOC1O95751 146 aaPredicted RBP21.13■□□□□ 0.97
MSX2-201ENST00000239243 SLC25A1P53007 311 aa21.13■□□□□ 0.97
MSX2-201ENST00000239243 GPR139Q6DWJ6 353 aa21.13■□□□□ 0.97
MSX2-201ENST00000239243 VASNQ6EMK4 673 aa21.13■□□□□ 0.97
MSX2-201ENST00000239243 LCN10Q6JVE6 187 aa21.13■□□□□ 0.97
MSX2-201ENST00000239243 LEG1Q6P5S2 330 aa21.13■□□□□ 0.97
MSX2-201ENST00000239243 VASH1Q7L8A9 365 aaPredicted RBP21.13■□□□□ 0.97
MSX2-201ENST00000239243 MAMDC2Q7Z304 686 aaPredicted RBP21.13■□□□□ 0.97
MSX2-201ENST00000239243 GALNT6Q8NCL4 622 aa21.13■□□□□ 0.97
MSX2-201ENST00000239243 C4orf36Q96KX1 117 aa21.13■□□□□ 0.97
MSX2-201ENST00000239243 Q96M85 177 aa21.13■□□□□ 0.97
MSX2-201ENST00000239243 SLC30A2Q9BRI3 323 aa21.13■□□□□ 0.97
MSX2-201ENST00000239243 MESP1Q9BRJ9 268 aa21.13■□□□□ 0.97
MSX2-201ENST00000239243 GRHPRQ9UBQ7 328 aa21.13■□□□□ 0.97
MSX2-201ENST00000239243 TMED7Q9Y3B3 224 aa21.13■□□□□ 0.97
MSX2-201ENST00000239243 UGT2A1Q9Y4X1 527 aa21.13■□□□□ 0.97
MSX2-201ENST00000239243 MPDZO75970 2070 aa21.13■□□□□ 0.97
MSX2-201ENST00000239243 CTDSP2O14595 271 aa21.13■□□□□ 0.97
MSX2-201ENST00000239243 RGS5O15539 181 aa21.13■□□□□ 0.97
MSX2-201ENST00000239243 RGS9O75916 674 aaPredicted RBP21.13■□□□□ 0.97
MSX2-201ENST00000239243 BGLAPP02818 100 aa21.13■□□□□ 0.97
MSX2-201ENST00000239243 F8A1P23610 371 aa21.13■□□□□ 0.97
MSX2-201ENST00000239243 FBXW4P57775 412 aa21.13■□□□□ 0.97
MSX2-201ENST00000239243 HNRNPA0Q13151 305 aaKnown RBP21.13■□□□□ 0.97
MSX2-201ENST00000239243 COL28A1Q2UY09 1125 aa21.13■□□□□ 0.97
MSX2-201ENST00000239243 POMZP3Q6PJE2 187 aa21.13■□□□□ 0.97
MSX2-201ENST00000239243 MARCH9Q86YJ5 346 aa21.13■□□□□ 0.97
MSX2-201ENST00000239243 SYS1Q8N2H4 156 aa21.13■□□□□ 0.97
MSX2-201ENST00000239243 LSM14AQ8ND56 463 aaKnown RBP21.13■□□□□ 0.97
MSX2-201ENST00000239243 HGDQ93099 445 aa21.13■□□□□ 0.97
MSX2-201ENST00000239243 HDHD5Q9BXW7 423 aa21.13■□□□□ 0.97
MSX2-201ENST00000239243 MOKQ9UQ07 419 aa21.13■□□□□ 0.97
MSX2-201ENST00000239243 COL6A3P12111 3177 aa21.12■□□□□ 0.97
MSX2-201ENST00000239243 A8MVM7 634 aa21.12■□□□□ 0.97
MSX2-201ENST00000239243 J3QLW9 94 aa21.12■□□□□ 0.97
MSX2-201ENST00000239243 LRRTM2O43300 516 aa21.12■□□□□ 0.97
MSX2-201ENST00000239243 PLPP2O43688 288 aa21.12■□□□□ 0.97
MSX2-201ENST00000239243 SUSD5O60279 629 aa21.12■□□□□ 0.97
MSX2-201ENST00000239243 GLCEO94923 617 aa21.12■□□□□ 0.97
MSX2-201ENST00000239243 ZNF19P17023 458 aa21.12■□□□□ 0.97
MSX2-201ENST00000239243 IFITM3Q01628 133 aa21.12■□□□□ 0.97
MSX2-201ENST00000239243 FAM69AQ5T7M9 428 aa21.12■□□□□ 0.97
MSX2-201ENST00000239243 C16orf47Q6ZP98 133 aaPredicted RBP21.12■□□□□ 0.97
MSX2-201ENST00000239243 SLC35F2Q8IXU6 374 aa21.12■□□□□ 0.97
MSX2-201ENST00000239243 NEIL3Q8TAT5 605 aa21.12■□□□□ 0.97
MSX2-201ENST00000239243 SLC22A8Q8TCC7 542 aa21.12■□□□□ 0.97
MSX2-201ENST00000239243 STK35Q8TDR2 534 aa21.12■□□□□ 0.97
MSX2-201ENST00000239243 ST8SIA1Q92185 356 aa21.12■□□□□ 0.97
MSX2-201ENST00000239243 ABTB1Q969K4 478 aaPredicted RBP21.12■□□□□ 0.97
MSX2-201ENST00000239243 WDFY2Q96P53 400 aa21.12■□□□□ 0.97
MSX2-201ENST00000239243 PCDHGB2Q9Y5G2 931 aa21.12■□□□□ 0.97
MSX2-201ENST00000239243 EXPH5Q8NEV8 1989 aa21.12■□□□□ 0.97
MSX2-201ENST00000239243 ANKUB1A6NFN9 424 aa21.12■□□□□ 0.97
MSX2-201ENST00000239243 CASKO14936 926 aa21.12■□□□□ 0.97
MSX2-201ENST00000239243 ACP1P24666 158 aa21.12■□□□□ 0.97
MSX2-201ENST00000239243 HSF2Q03933 536 aa21.12■□□□□ 0.97
MSX2-201ENST00000239243 DBPQ10586 325 aaPredicted RBP21.12■□□□□ 0.97
MSX2-201ENST00000239243 OXA1LQ15070 435 aa21.12■□□□□ 0.97
MSX2-201ENST00000239243 LPAL2Q16609 132 aa21.12■□□□□ 0.97
MSX2-201ENST00000239243 QPCTLQ9NXS2 382 aa21.12■□□□□ 0.97
MSX2-201ENST00000239243 TMEM200CA6NKL6 621 aa21.11■□□□□ 0.97
MSX2-201ENST00000239243 C17orf51A8MQB3 221 aa21.11■□□□□ 0.97
MSX2-201ENST00000239243 C9J4A7 227 aa21.11■□□□□ 0.97
MSX2-201ENST00000239243 ADAM10O14672 748 aa21.11■□□□□ 0.97
MSX2-201ENST00000239243 MAGEB3O15480 346 aa21.11■□□□□ 0.97
MSX2-201ENST00000239243 MPLP40238 635 aa21.11■□□□□ 0.97
MSX2-201ENST00000239243 SYT14Q8NB59 555 aa21.11■□□□□ 0.97
MSX2-201ENST00000239243 OR6K6Q8NGW6 343 aa21.11■□□□□ 0.97
MSX2-201ENST00000239243 C8orf44Q96CB5 159 aa21.11■□□□□ 0.97
MSX2-201ENST00000239243 MYOTQ9UBF9 498 aa21.11■□□□□ 0.97
MSX2-201ENST00000239243 ZMIZ1Q9ULJ6 1067 aa21.11■□□□□ 0.97
MSX2-201ENST00000239243 CMAHPQ9Y471 501 aa21.11■□□□□ 0.97
MSX2-201ENST00000239243 ZDBF2Q9HCK1 2354 aa21.11■□□□□ 0.97
MSX2-201ENST00000239243 NPIPB7O75200 414 aa21.1■□□□□ 0.97
MSX2-201ENST00000239243 SERPINI2O75830 405 aa21.1■□□□□ 0.97
MSX2-201ENST00000239243 SNX4O95219 450 aa21.1■□□□□ 0.97
MSX2-201ENST00000239243 TFP02787 698 aa21.1■□□□□ 0.97
MSX2-201ENST00000239243 F13BP05160 661 aa21.1■□□□□ 0.97
MSX2-201ENST00000239243 SP9P0CG40 484 aa21.1■□□□□ 0.97
MSX2-201ENST00000239243 TNFSF8P32971 234 aa21.1■□□□□ 0.97
MSX2-201ENST00000239243 CDKN2AP42771 156 aaKnown RBP21.1■□□□□ 0.97
MSX2-201ENST00000239243 ADGRG3Q86Y34 549 aa21.1■□□□□ 0.97
MSX2-201ENST00000239243 OR51L1Q8NGJ5 315 aa21.1■□□□□ 0.97
MSX2-201ENST00000239243 RNF138Q8WVD3 245 aa21.1■□□□□ 0.97
MSX2-201ENST00000239243 SLC35F4A4IF30 521 aa21.1■□□□□ 0.97
MSX2-201ENST00000239243 OR2T1O43869 369 aa21.1■□□□□ 0.97
MSX2-201ENST00000239243 ZNF354AO60765 605 aaPredicted RBP21.1■□□□□ 0.97
MSX2-201ENST00000239243 ZNF28P17035 718 aa21.1■□□□□ 0.97
MSX2-201ENST00000239243 OR12D2P58182 307 aa21.1■□□□□ 0.97
MSX2-201ENST00000239243 KRR1Q13601 381 aaKnown RBP21.1■□□□□ 0.97
MSX2-201ENST00000239243 SGCBQ16585 318 aa21.1■□□□□ 0.97
MSX2-201ENST00000239243 MR1Q95460 341 aa21.1■□□□□ 0.97
MSX2-201ENST00000239243 AKAP7Q9P0M2 348 aaPredicted RBP21.1■□□□□ 0.97
MSX2-201ENST00000239243 PLEKHB1Q9UF11 243 aaPredicted RBP21.1■□□□□ 0.97
MSX2-201ENST00000239243 LOC102723996A0A087X1L8 192 aa21.09■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 56.2 ms