RNA–Protein interactions for RNA: ENST00000238379.9

HDHD3-201, Transcript of haloacid dehalogenase like hydrolase domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDHD3, Length 1,834 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDHD3-201ENST00000238379 DLL3Q9NYJ7 618 aa13.75□□□□□ -0.21
HDHD3-201ENST00000238379 TAS2R5Q9NYW4 299 aa13.75□□□□□ -0.21
HDHD3-201ENST00000238379 SEC14L4Q9UDX3 406 aa13.75□□□□□ -0.21
HDHD3-201ENST00000238379 KLHL21Q9UJP4 597 aa13.75□□□□□ -0.21
HDHD3-201ENST00000238379 EXOGQ9Y2C4 368 aaKnown RBP13.75□□□□□ -0.21
HDHD3-201ENST00000238379 LSM2Q9Y333 95 aaKnown RBP13.75□□□□□ -0.21
HDHD3-201ENST00000238379 FTCDNL1E5RQL4 147 aa13.74□□□□□ -0.21
HDHD3-201ENST00000238379 H3BMQ9 156 aa13.74□□□□□ -0.21
HDHD3-201ENST00000238379 SNPHO15079 494 aa13.74□□□□□ -0.21
HDHD3-201ENST00000238379 F13BP05160 661 aa13.74□□□□□ -0.21
HDHD3-201ENST00000238379 IL11P20809 199 aa13.74□□□□□ -0.21
HDHD3-201ENST00000238379 SLC2A5P22732 501 aa13.74□□□□□ -0.21
HDHD3-201ENST00000238379 DOC2BQ14184 412 aa13.74□□□□□ -0.21
HDHD3-201ENST00000238379 SGCBQ16585 318 aa13.74□□□□□ -0.21
HDHD3-201ENST00000238379 SLC16A12Q6ZSM3 486 aa13.74□□□□□ -0.21
HDHD3-201ENST00000238379 SHFQ7M4L6 423 aa13.74□□□□□ -0.21
HDHD3-201ENST00000238379 ZNF367Q7RTV3 350 aa13.74□□□□□ -0.21
HDHD3-201ENST00000238379 SDR9C7Q8NEX9 313 aa13.74□□□□□ -0.21
HDHD3-201ENST00000238379 KISS1RQ969F8 398 aaPredicted RBP13.74□□□□□ -0.21
HDHD3-201ENST00000238379 ARL5BQ96KC2 179 aa13.74□□□□□ -0.21
HDHD3-201ENST00000238379 COG8Q96MW5 612 aa13.74□□□□□ -0.21
HDHD3-201ENST00000238379 STMN3Q9NZ72 180 aa13.74□□□□□ -0.21
HDHD3-201ENST00000238379 ERGIC3Q9Y282 383 aa13.74□□□□□ -0.21
HDHD3-201ENST00000238379 SLC6A5Q9Y345 797 aa13.74□□□□□ -0.21
HDHD3-201ENST00000238379 CCDC182A6NF36 153 aa13.74□□□□□ -0.21
HDHD3-201ENST00000238379 G3V3Y1 287 aa13.74□□□□□ -0.21
HDHD3-201ENST00000238379 DXOO77932 396 aaKnown RBP13.74□□□□□ -0.21
HDHD3-201ENST00000238379 SNX4O95219 450 aa13.74□□□□□ -0.21
HDHD3-201ENST00000238379 TXNDC12O95881 172 aa13.74□□□□□ -0.21
HDHD3-201ENST00000238379 CLUP10909 449 aa13.74□□□□□ -0.21
HDHD3-201ENST00000238379 LIFP15018 202 aa13.74□□□□□ -0.21
HDHD3-201ENST00000238379 PAICSP22234 425 aaKnown RBP13.74□□□□□ -0.21
HDHD3-201ENST00000238379 PCSK6P29122 969 aa13.74□□□□□ -0.21
HDHD3-201ENST00000238379 GRPRP30550 384 aa13.74□□□□□ -0.21
HDHD3-201ENST00000238379 TGFBR2P37173 567 aa13.74□□□□□ -0.21
HDHD3-201ENST00000238379 ETV1P50549 477 aa13.74□□□□□ -0.21
HDHD3-201ENST00000238379 CTXN1P60606 82 aa13.74□□□□□ -0.21
HDHD3-201ENST00000238379 FOXK1P85037 733 aa13.74□□□□□ -0.21
HDHD3-201ENST00000238379 KHDRBS1Q07666 443 aaKnown RBP eCLIP13.74□□□□□ -0.21
HDHD3-201ENST00000238379 AIMP2Q13155 320 aaKnown RBP13.74□□□□□ -0.21
HDHD3-201ENST00000238379 TMED1Q13445 227 aa13.74□□□□□ -0.21
HDHD3-201ENST00000238379 TIGD6Q17RP2 521 aa13.74□□□□□ -0.21
HDHD3-201ENST00000238379 SLC6A19Q695T7 634 aa13.74□□□□□ -0.21
HDHD3-201ENST00000238379 PAQR6Q6TCH4 344 aa13.74□□□□□ -0.21
HDHD3-201ENST00000238379 B3GLCTQ6Y288 498 aa13.74□□□□□ -0.21
HDHD3-201ENST00000238379 ANKRD13BQ86YJ7 626 aa13.74□□□□□ -0.21
HDHD3-201ENST00000238379 GPALPP1Q8IXQ4 340 aa13.74□□□□□ -0.21
HDHD3-201ENST00000238379 NANOGP1Q8N7R0 232 aa13.74□□□□□ -0.21
HDHD3-201ENST00000238379 FAM98AQ8NCA5 519 aaKnown RBP13.74□□□□□ -0.21
HDHD3-201ENST00000238379 NPEPL1Q8NDH3 523 aa13.74□□□□□ -0.21
HDHD3-201ENST00000238379 PROKR2Q8NFJ6 384 aa13.74□□□□□ -0.21
HDHD3-201ENST00000238379 OR4F15Q8NGB8 312 aa13.74□□□□□ -0.21
HDHD3-201ENST00000238379 OR5J2Q8NH18 312 aa13.74□□□□□ -0.21
HDHD3-201ENST00000238379 MFSD8Q8NHS3 518 aa13.74□□□□□ -0.21
HDHD3-201ENST00000238379 RAB2BQ8WUD1 216 aa13.74□□□□□ -0.21
HDHD3-201ENST00000238379 RELTQ969Z4 430 aa13.74□□□□□ -0.21
HDHD3-201ENST00000238379 DDIT4LQ96D03 193 aa13.74□□□□□ -0.21
HDHD3-201ENST00000238379 RASD2Q96D21 266 aa13.74□□□□□ -0.21
HDHD3-201ENST00000238379 Q96M85 177 aa13.74□□□□□ -0.21
HDHD3-201ENST00000238379 GNRHR2Q96P88 292 aa13.74□□□□□ -0.21
HDHD3-201ENST00000238379 TEAD3Q99594 435 aa13.74□□□□□ -0.21
HDHD3-201ENST00000238379 PTTG2Q9NZH5 202 aa13.74□□□□□ -0.21
HDHD3-201ENST00000238379 PTPRZ1P23471 2315 aaPredicted RBP13.73□□□□□ -0.21
HDHD3-201ENST00000238379 TRIM64BA6NI03 449 aa13.73□□□□□ -0.21
HDHD3-201ENST00000238379 FAM47E-STBD1D6RA91 191 aa13.73□□□□□ -0.21
HDHD3-201ENST00000238379 J3QRE1 110 aa13.73□□□□□ -0.21
HDHD3-201ENST00000238379 M0R3G1 203 aa13.73□□□□□ -0.21
HDHD3-201ENST00000238379 IMPA2O14732 288 aa13.73□□□□□ -0.21
HDHD3-201ENST00000238379 LIPCP11150 499 aa13.73□□□□□ -0.21
HDHD3-201ENST00000238379 ADH6P28332 368 aa13.73□□□□□ -0.21
HDHD3-201ENST00000238379 LIPAP38571 399 aa13.73□□□□□ -0.21
HDHD3-201ENST00000238379 EIF1P41567 113 aaKnown RBP13.73□□□□□ -0.21
HDHD3-201ENST00000238379 CYB561P49447 251 aa13.73□□□□□ -0.21
HDHD3-201ENST00000238379 KLHL12Q53G59 568 aa13.73□□□□□ -0.21
HDHD3-201ENST00000238379 TIGD3Q6B0B8 471 aa13.73□□□□□ -0.21
HDHD3-201ENST00000238379 ALDH16A1Q8IZ83 802 aa13.73□□□□□ -0.21
HDHD3-201ENST00000238379 ATP6V1C2Q8NEY4 427 aa13.73□□□□□ -0.21
HDHD3-201ENST00000238379 OR1J4Q8NGS1 313 aa13.73□□□□□ -0.21
HDHD3-201ENST00000238379 TMEM41AQ96HV5 264 aa13.73□□□□□ -0.21
HDHD3-201ENST00000238379 NMNAT3Q96T66 252 aa13.73□□□□□ -0.21
HDHD3-201ENST00000238379 POTEKPQ9BYX7 375 aa13.73□□□□□ -0.21
HDHD3-201ENST00000238379 OR51V1Q9H2C8 321 aa13.73□□□□□ -0.21
HDHD3-201ENST00000238379 WDR70Q9NW82 654 aa13.73□□□□□ -0.21
HDHD3-201ENST00000238379 ENPP5Q9UJA9 477 aa13.73□□□□□ -0.21
HDHD3-201ENST00000238379 A0A087WZY1 265 aa13.72□□□□□ -0.21
HDHD3-201ENST00000238379 TEX13CA0A0J9YWL9 993 aa13.72□□□□□ -0.21
HDHD3-201ENST00000238379 SLC22A31A6NKX4 558 aa13.72□□□□□ -0.21
HDHD3-201ENST00000238379 SLC30A4O14863 429 aa13.72□□□□□ -0.21
HDHD3-201ENST00000238379 TRIM3O75382 744 aaPredicted RBP13.72□□□□□ -0.21
HDHD3-201ENST00000238379 ATE1O95260 518 aa13.72□□□□□ -0.21
HDHD3-201ENST00000238379 IGHA1P01876 353 aa13.72□□□□□ -0.21
HDHD3-201ENST00000238379 P04436 131 aa13.72□□□□□ -0.21
HDHD3-201ENST00000238379 TCEA1P23193 301 aaKnown RBP13.72□□□□□ -0.21
HDHD3-201ENST00000238379 SDHAP31040 664 aa13.72□□□□□ -0.21
HDHD3-201ENST00000238379 SPHARQ15513 63 aa13.72□□□□□ -0.21
HDHD3-201ENST00000238379 MED22Q15528 200 aa13.72□□□□□ -0.21
HDHD3-201ENST00000238379 ARMC4Q5T2S8 1044 aa13.72□□□□□ -0.21
HDHD3-201ENST00000238379 LSM14AQ8ND56 463 aaKnown RBP13.72□□□□□ -0.21
HDHD3-201ENST00000238379 PSD4Q8NDX1 1056 aa13.72□□□□□ -0.21
HDHD3-201ENST00000238379 OR5M1Q8NGP8 315 aa13.72□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms