RNA–Protein interactions for RNA: ENST00000230480.10

VEGFA-201, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best) BASIC

Gene VEGFA, Length 993 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-201ENST00000230480 C16orf97H3BN30 126 aa12.13□□□□□ -0.47
VEGFA-201ENST00000230480 PRSS23O95084 383 aa12.13□□□□□ -0.47
VEGFA-201ENST00000230480 PLGP00747 810 aaPredicted RBP12.13□□□□□ -0.47
VEGFA-201ENST00000230480 HRGP04196 525 aa12.13□□□□□ -0.47
VEGFA-201ENST00000230480 PNMTP11086 282 aa12.13□□□□□ -0.47
VEGFA-201ENST00000230480 POU2F1P14859 743 aa12.13□□□□□ -0.47
VEGFA-201ENST00000230480 NCK1P16333 377 aa12.13□□□□□ -0.47
VEGFA-201ENST00000230480 PSMB1P20618 241 aaKnown RBP12.13□□□□□ -0.47
VEGFA-201ENST00000230480 IGHV1-2P23083 117 aa12.13□□□□□ -0.47
VEGFA-201ENST00000230480 RPS5P46782 204 aaKnown RBP12.13□□□□□ -0.47
VEGFA-201ENST00000230480 SELENOWP63302 87 aa12.13□□□□□ -0.47
VEGFA-201ENST00000230480 LGALS3BPQ08380 585 aa12.13□□□□□ -0.47
VEGFA-201ENST00000230480 EXOC3L2Q2M3D2 409 aa12.13□□□□□ -0.47
VEGFA-201ENST00000230480 OTUD3Q5T2D3 398 aaPredicted RBP12.13□□□□□ -0.47
VEGFA-201ENST00000230480 GTF2IRD2BQ6EKJ0 949 aa12.13□□□□□ -0.47
VEGFA-201ENST00000230480 ZNF613Q6PF04 617 aa12.13□□□□□ -0.47
VEGFA-201ENST00000230480 GTF2IRD2Q86UP8 949 aa12.13□□□□□ -0.47
VEGFA-201ENST00000230480 CXorf67Q86X51 503 aaPredicted RBP12.13□□□□□ -0.47
VEGFA-201ENST00000230480 CARM1Q86X55 608 aa12.13□□□□□ -0.47
VEGFA-201ENST00000230480 KIF18BQ86Y91 864 aa12.13□□□□□ -0.47
VEGFA-201ENST00000230480 EGFL6Q8IUX8 553 aa12.13□□□□□ -0.47
VEGFA-201ENST00000230480 NKAIN4Q8IVV8 208 aa12.13□□□□□ -0.47
VEGFA-201ENST00000230480 FAM86B1Q8N7N1 296 aa12.13□□□□□ -0.47
VEGFA-201ENST00000230480 FAM156AQ8NDB6 213 aa12.13□□□□□ -0.47
VEGFA-201ENST00000230480 ADAMTS16Q8TE57 1224 aa12.13□□□□□ -0.47
VEGFA-201ENST00000230480 DNAJA4Q8WW22 397 aaPredicted RBP12.13□□□□□ -0.47
VEGFA-201ENST00000230480 CMTM5Q96DZ9 223 aa12.13□□□□□ -0.47
VEGFA-201ENST00000230480 DACH2Q96NX9 599 aa12.13□□□□□ -0.47
VEGFA-201ENST00000230480 RAB3IPQ96QF0 476 aaPredicted RBP12.13□□□□□ -0.47
VEGFA-201ENST00000230480 ALG2Q9H553 416 aa12.13□□□□□ -0.47
VEGFA-201ENST00000230480 MAN2C1Q9NTJ4 1040 aa12.13□□□□□ -0.47
VEGFA-201ENST00000230480 KLHL28Q9NXS3 571 aa12.13□□□□□ -0.47
VEGFA-201ENST00000230480 A4GNTQ9UNA3 340 aa12.13□□□□□ -0.47
VEGFA-201ENST00000230480 SH3GLB1Q9Y371 365 aa12.13□□□□□ -0.47
VEGFA-201ENST00000230480 TEP1Q99973 2627 aaKnown RBP12.13□□□□□ -0.47
VEGFA-201ENST00000230480 HIVEP1P15822 2718 aa12.13□□□□□ -0.47
VEGFA-201ENST00000230480 HEATR1Q9H583 2144 aaKnown RBP12.13□□□□□ -0.47
VEGFA-201ENST00000230480 SH3D21A4FU49 640 aa12.12□□□□□ -0.47
VEGFA-201ENST00000230480 CXCR6O00574 342 aa12.12□□□□□ -0.47
VEGFA-201ENST00000230480 ATP5HO75947 161 aa12.12□□□□□ -0.47
VEGFA-201ENST00000230480 ADAP00813 363 aa12.12□□□□□ -0.47
VEGFA-201ENST00000230480 IGHV3-9P01782 118 aa12.12□□□□□ -0.47
VEGFA-201ENST00000230480 UQCRBP14927 111 aa12.12□□□□□ -0.47
VEGFA-201ENST00000230480 GGT1P19440 569 aa12.12□□□□□ -0.47
VEGFA-201ENST00000230480 COX5AP20674 150 aa12.12□□□□□ -0.47
VEGFA-201ENST00000230480 MSX2P35548 267 aaPredicted RBP12.12□□□□□ -0.47
VEGFA-201ENST00000230480 PIN1Q13526 163 aaPredicted RBP12.12□□□□□ -0.47
VEGFA-201ENST00000230480 TMEM201Q5SNT2 666 aa12.12□□□□□ -0.47
VEGFA-201ENST00000230480 SFRP5Q5T4F7 317 aa12.12□□□□□ -0.47
VEGFA-201ENST00000230480 INTS11Q5TA45 600 aaKnown RBP12.12□□□□□ -0.47
VEGFA-201ENST00000230480 CREB3L2Q70SY1 520 aa12.12□□□□□ -0.47
VEGFA-201ENST00000230480 CBLL1Q75N03 491 aa12.12□□□□□ -0.47
VEGFA-201ENST00000230480 RNF148Q8N7C7 305 aa12.12□□□□□ -0.47
VEGFA-201ENST00000230480 OR9K2Q8NGE7 335 aa12.12□□□□□ -0.47
VEGFA-201ENST00000230480 SLC47A1Q96FL8 570 aa12.12□□□□□ -0.47
VEGFA-201ENST00000230480 LRRC37BQ96QE4 947 aa12.12□□□□□ -0.47
VEGFA-201ENST00000230480 HS3ST6Q96QI5 342 aa12.12□□□□□ -0.47
VEGFA-201ENST00000230480 TMEM43Q9BTV4 400 aa12.12□□□□□ -0.47
VEGFA-201ENST00000230480 AMBRA1Q9C0C7 1298 aa12.12□□□□□ -0.47
VEGFA-201ENST00000230480 EVA1AQ9H8M9 152 aa12.12□□□□□ -0.47
VEGFA-201ENST00000230480 PLEKHF2Q9H8W4 249 aa12.12□□□□□ -0.47
VEGFA-201ENST00000230480 TMEM27Q9HBJ8 222 aa12.12□□□□□ -0.47
VEGFA-201ENST00000230480 ADPRHL2Q9NX46 363 aa12.12□□□□□ -0.47
VEGFA-201ENST00000230480 TAGLN3Q9UI15 199 aa12.12□□□□□ -0.47
VEGFA-201ENST00000230480 ARID1AO14497 2285 aa12.12□□□□□ -0.47
VEGFA-201ENST00000230480 A6NHS1 94 aa12.11□□□□□ -0.47
VEGFA-201ENST00000230480 ELOA3DA6NLF2 546 aaPredicted RBP12.11□□□□□ -0.47
VEGFA-201ENST00000230480 M0R082 166 aa12.11□□□□□ -0.47
VEGFA-201ENST00000230480 CHP2O43745 196 aa12.11□□□□□ -0.47
VEGFA-201ENST00000230480 EIF1BO60739 113 aaKnown RBP12.11□□□□□ -0.47
VEGFA-201ENST00000230480 ZNF432O94892 652 aa12.11□□□□□ -0.47
VEGFA-201ENST00000230480 GPIP06744 558 aa12.11□□□□□ -0.47
VEGFA-201ENST00000230480 ITGA5P08648 1049 aa12.11□□□□□ -0.47
VEGFA-201ENST00000230480 HLA-DOBP13765 273 aa12.11□□□□□ -0.47
VEGFA-201ENST00000230480 CRYGSP22914 178 aa12.11□□□□□ -0.47
VEGFA-201ENST00000230480 GRPRP30550 384 aa12.11□□□□□ -0.47
VEGFA-201ENST00000230480 BNIP1Q12981 228 aa12.11□□□□□ -0.47
VEGFA-201ENST00000230480 KRT72Q14CN4 511 aa12.11□□□□□ -0.47
VEGFA-201ENST00000230480 POU4F3Q15319 338 aa12.11□□□□□ -0.47
VEGFA-201ENST00000230480 ELOA3BQ3SY89 546 aa12.11□□□□□ -0.47
VEGFA-201ENST00000230480 TSPO2Q5TGU0 170 aa12.11□□□□□ -0.47
VEGFA-201ENST00000230480 Q6ZT83 130 aa12.11□□□□□ -0.47
VEGFA-201ENST00000230480 BEND4Q6ZU67 534 aa12.11□□□□□ -0.47
VEGFA-201ENST00000230480 SLC46A3Q7Z3Q1 461 aa12.11□□□□□ -0.47
VEGFA-201ENST00000230480 ARPINQ7Z6K5 226 aa12.11□□□□□ -0.47
VEGFA-201ENST00000230480 GALNT5Q7Z7M9 940 aa12.11□□□□□ -0.47
VEGFA-201ENST00000230480 LRRC17Q8N6Y2 441 aa12.11□□□□□ -0.47
VEGFA-201ENST00000230480 ZNF433Q8N7K0 673 aaPredicted RBP12.11□□□□□ -0.47
VEGFA-201ENST00000230480 ELOA3Q8NG57 546 aa12.11□□□□□ -0.47
VEGFA-201ENST00000230480 OR6S1Q8NH40 331 aa12.11□□□□□ -0.47
VEGFA-201ENST00000230480 ZNF417Q8TAU3 575 aa12.11□□□□□ -0.47
VEGFA-201ENST00000230480 PIGXQ8TBF5 258 aa12.11□□□□□ -0.47
VEGFA-201ENST00000230480 TMEM45BQ96B21 275 aa12.11□□□□□ -0.47
VEGFA-201ENST00000230480 SLC25A36Q96CQ1 311 aa12.11□□□□□ -0.47
VEGFA-201ENST00000230480 ZNF587Q96SQ5 575 aaPredicted RBP12.11□□□□□ -0.47
VEGFA-201ENST00000230480 SF3B5Q9BWJ5 86 aaKnown RBP12.11□□□□□ -0.47
VEGFA-201ENST00000230480 KLHL4Q9C0H6 718 aa12.11□□□□□ -0.47
VEGFA-201ENST00000230480 SLC24A3Q9HC58 644 aa12.11□□□□□ -0.47
VEGFA-201ENST00000230480 SLC7A10Q9NS82 523 aa12.11□□□□□ -0.47
VEGFA-201ENST00000230480 C6orf203Q9P0P8 240 aaPredicted RBP12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms