RNA–Protein interactions for RNA: ENST00000229387.6

RFX4-201, Transcript of regulatory factor X4, humanhuman

TSL 1 (best) BASIC

Gene RFX4, Length 3,378 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX4-201ENST00000229387 ZNF382Q96SR6 550 aa5.26□□□□□ -1.57
RFX4-201ENST00000229387 THAP7Q9BT49 309 aaPredicted RBP5.26□□□□□ -1.57
RFX4-201ENST00000229387 MRPL13Q9BYD1 178 aaKnown RBP5.26□□□□□ -1.57
RFX4-201ENST00000229387 COMMD4Q9H0A8 199 aa5.26□□□□□ -1.57
RFX4-201ENST00000229387 PCBD2Q9H0N5 130 aa5.26□□□□□ -1.57
RFX4-201ENST00000229387 SMG9Q9H0W8 520 aaKnown RBP5.26□□□□□ -1.57
RFX4-201ENST00000229387 MID1IP1Q9NPA3 183 aa5.26□□□□□ -1.57
RFX4-201ENST00000229387 MAN2C1Q9NTJ4 1040 aa5.26□□□□□ -1.57
RFX4-201ENST00000229387 TXNL4BQ9NX01 149 aaKnown RBP5.26□□□□□ -1.57
RFX4-201ENST00000229387 RPS6KB2Q9UBS0 482 aa5.26□□□□□ -1.57
RFX4-201ENST00000229387 OR52A1Q9UKL2 312 aa5.26□□□□□ -1.57
RFX4-201ENST00000229387 ZFP30Q9Y2G7 519 aa5.26□□□□□ -1.57
RFX4-201ENST00000229387 SLCO1B1Q9Y6L6 691 aa5.26□□□□□ -1.57
RFX4-201ENST00000229387 PLXNA1Q9UIW2 1896 aa5.26□□□□□ -1.57
RFX4-201ENST00000229387 PRAMEF27A3QJZ7 478 aa5.26□□□□□ -1.57
RFX4-201ENST00000229387 ANHXE9PGG2 379 aa5.26□□□□□ -1.57
RFX4-201ENST00000229387 M0QZQ0 153 aa5.26□□□□□ -1.57
RFX4-201ENST00000229387 SIAH2O43255 324 aa5.26□□□□□ -1.57
RFX4-201ENST00000229387 RNF13O43567 381 aa5.26□□□□□ -1.57
RFX4-201ENST00000229387 TCF21O43680 179 aa5.26□□□□□ -1.57
RFX4-201ENST00000229387 SLC25A17O43808 307 aa5.26□□□□□ -1.57
RFX4-201ENST00000229387 SOX15O60248 233 aa5.26□□□□□ -1.57
RFX4-201ENST00000229387 CA11O75493 328 aa5.26□□□□□ -1.57
RFX4-201ENST00000229387 TNFRSF6BO95407 300 aa5.26□□□□□ -1.57
RFX4-201ENST00000229387 CLDN9O95484 217 aa5.26□□□□□ -1.57
RFX4-201ENST00000229387 SYPP08247 313 aa5.26□□□□□ -1.57
RFX4-201ENST00000229387 ALPIP09923 528 aa5.26□□□□□ -1.57
RFX4-201ENST00000229387 LINC00032P0C843 101 aa5.26□□□□□ -1.57
RFX4-201ENST00000229387 TBPP20226 339 aa5.26□□□□□ -1.57
RFX4-201ENST00000229387 CD82P27701 267 aa5.26□□□□□ -1.57
RFX4-201ENST00000229387 AVPR2P30518 371 aa5.26□□□□□ -1.57
RFX4-201ENST00000229387 CTSOP43234 321 aaPredicted RBP5.26□□□□□ -1.57
RFX4-201ENST00000229387 OR3A1P47881 315 aa5.26□□□□□ -1.57
RFX4-201ENST00000229387 RFX3P48380 749 aa5.26□□□□□ -1.57
RFX4-201ENST00000229387 FHITP49789 147 aa5.26□□□□□ -1.57
RFX4-201ENST00000229387 FOXA1P55317 472 aa5.26□□□□□ -1.57
RFX4-201ENST00000229387 RPS26P62854 115 aaKnown RBP5.26□□□□□ -1.57
RFX4-201ENST00000229387 NHLH1Q02575 133 aa5.26□□□□□ -1.57
RFX4-201ENST00000229387 TPBGQ13641 420 aa5.26□□□□□ -1.57
RFX4-201ENST00000229387 ATP6V1FQ16864 119 aa5.26□□□□□ -1.57
RFX4-201ENST00000229387 UGT8Q16880 541 aa5.26□□□□□ -1.57
RFX4-201ENST00000229387 IL34Q6ZMJ4 242 aa5.26□□□□□ -1.57
RFX4-201ENST00000229387 C6orf120Q7Z4R8 191 aa5.26□□□□□ -1.57
RFX4-201ENST00000229387 PDZD3Q86UT5 571 aa5.26□□□□□ -1.57
RFX4-201ENST00000229387 PHYKPLQ8IUZ5 450 aa5.26□□□□□ -1.57
RFX4-201ENST00000229387 FAM126BQ8IXS8 530 aa5.26□□□□□ -1.57
RFX4-201ENST00000229387 ACBD7Q8N6N7 88 aa5.26□□□□□ -1.57
RFX4-201ENST00000229387 SDR9C7Q8NEX9 313 aa5.26□□□□□ -1.57
RFX4-201ENST00000229387 PIGXQ8TBF5 258 aa5.26□□□□□ -1.57
RFX4-201ENST00000229387 ZNF707Q96C28 371 aaPredicted RBP5.26□□□□□ -1.57
RFX4-201ENST00000229387 SPACA9Q96E40 222 aaPredicted RBP5.26□□□□□ -1.57
RFX4-201ENST00000229387 PACRGQ96M98 296 aaPredicted RBP5.26□□□□□ -1.57
RFX4-201ENST00000229387 CDK15Q96Q40 435 aa5.26□□□□□ -1.57
RFX4-201ENST00000229387 SLC22A12Q96S37 553 aa5.26□□□□□ -1.57
RFX4-201ENST00000229387 GPR22Q99680 433 aa5.26□□□□□ -1.57
RFX4-201ENST00000229387 URM1Q9BTM9 101 aaKnown RBP5.26□□□□□ -1.57
RFX4-201ENST00000229387 SPRTNQ9H040 489 aaPredicted RBP5.26□□□□□ -1.57
RFX4-201ENST00000229387 EXOSC4Q9NPD3 245 aaKnown RBP5.26□□□□□ -1.57
RFX4-201ENST00000229387 KRCC1Q9NPI7 259 aaPredicted RBP5.26□□□□□ -1.57
RFX4-201ENST00000229387 SEMA4BQ9NPR2 832 aaPredicted RBP5.26□□□□□ -1.57
RFX4-201ENST00000229387 DCAF13Q9NV06 445 aaKnown RBP5.26□□□□□ -1.57
RFX4-201ENST00000229387 OR14J1Q9UGF5 321 aa5.26□□□□□ -1.57
RFX4-201ENST00000229387 TUBD1Q9UJT1 453 aa5.26□□□□□ -1.57
RFX4-201ENST00000229387 FBXL4Q9UKA2 621 aa5.26□□□□□ -1.57
RFX4-201ENST00000229387 SAMD4AQ9UPU9 718 aaKnown RBP5.26□□□□□ -1.57
RFX4-201ENST00000229387 KIAA0100Q14667 2235 aaKnown RBP5.26□□□□□ -1.57
RFX4-201ENST00000229387 ZSWIM8A7E2V4 1837 aa5.26□□□□□ -1.57
RFX4-201ENST00000229387 GOLGA4Q13439 2230 aaKnown RBP5.26□□□□□ -1.57
RFX4-201ENST00000229387 TMEM269A0A1B0GVZ9 245 aa5.25□□□□□ -1.57
RFX4-201ENST00000229387 A0A1W2PQ45 241 aaPredicted RBP5.25□□□□□ -1.57
RFX4-201ENST00000229387 A0A1W2PQY0 241 aa5.25□□□□□ -1.57
RFX4-201ENST00000229387 ZNF587BE7ETH6 402 aa5.25□□□□□ -1.57
RFX4-201ENST00000229387 LRRN3E7EW58 273 aa5.25□□□□□ -1.57
RFX4-201ENST00000229387 CCSO14618 274 aa5.25□□□□□ -1.57
RFX4-201ENST00000229387 SPINT1O43278 529 aa5.25□□□□□ -1.57
RFX4-201ENST00000229387 MELTFP08582 738 aa5.25□□□□□ -1.57
RFX4-201ENST00000229387 FPR1P21462 350 aa5.25□□□□□ -1.57
RFX4-201ENST00000229387 HTR2CP28335 458 aa5.25□□□□□ -1.57
RFX4-201ENST00000229387 ACAA2P42765 397 aaKnown RBP5.25□□□□□ -1.57
RFX4-201ENST00000229387 ZFP36L2P47974 494 aaKnown RBP5.25□□□□□ -1.57
RFX4-201ENST00000229387 ZNF140P52738 457 aaPredicted RBP5.25□□□□□ -1.57
RFX4-201ENST00000229387 WNT3P56703 355 aa5.25□□□□□ -1.57
RFX4-201ENST00000229387 AP3S2P59780 193 aa5.25□□□□□ -1.57
RFX4-201ENST00000229387 NRG1Q02297 640 aaPredicted RBP5.25□□□□□ -1.57
RFX4-201ENST00000229387 MLLT11Q13015 90 aaPredicted RBP5.25□□□□□ -1.57
RFX4-201ENST00000229387 HMGN3Q15651 99 aa5.25□□□□□ -1.57
RFX4-201ENST00000229387 C18orf21Q32NC0 220 aaPredicted RBP5.25□□□□□ -1.57
RFX4-201ENST00000229387 SLC36A2Q495M3 483 aa5.25□□□□□ -1.57
RFX4-201ENST00000229387 ATXN7L2Q5T6C5 722 aaPredicted RBP5.25□□□□□ -1.57
RFX4-201ENST00000229387 ZNF697Q5TEC3 545 aa5.25□□□□□ -1.57
RFX4-201ENST00000229387 HECTD2Q5U5R9 776 aa5.25□□□□□ -1.57
RFX4-201ENST00000229387 PLAG1Q6DJT9 500 aa5.25□□□□□ -1.57
RFX4-201ENST00000229387 ZNF774Q6NX45 483 aa5.25□□□□□ -1.57
RFX4-201ENST00000229387 VWA1Q6PCB0 445 aa5.25□□□□□ -1.57
RFX4-201ENST00000229387 FIGNL1Q6PIW4 674 aa5.25□□□□□ -1.57
RFX4-201ENST00000229387 HIST3H2BBQ8N257 126 aa5.25□□□□□ -1.57
RFX4-201ENST00000229387 FAM86B1Q8N7N1 296 aa5.25□□□□□ -1.57
RFX4-201ENST00000229387 OR10AD1Q8NGE0 317 aa5.25□□□□□ -1.57
RFX4-201ENST00000229387 M1APQ8TC57 530 aa5.25□□□□□ -1.57
RFX4-201ENST00000229387 HPSE2Q8WWQ2 592 aa5.25□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms