RNA–Protein interactions for RNA: ENST00000229330.8

HCFC2-201, Transcript of host cell factor C2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HCFC2, Length 5,734 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC2-201ENST00000229330 SLX4Q8IY92 1834 aa12.83□□□□□ -0.36
HCFC2-201ENST00000229330 TMEM212A6NML5 194 aa12.83□□□□□ -0.36
HCFC2-201ENST00000229330 KCNJ13O60928 360 aa12.83□□□□□ -0.36
HCFC2-201ENST00000229330 ZNF136P52737 540 aa12.83□□□□□ -0.36
HCFC2-201ENST00000229330 GPR18Q14330 331 aa12.83□□□□□ -0.36
HCFC2-201ENST00000229330 ACTBL2Q562R1 376 aa12.83□□□□□ -0.36
HCFC2-201ENST00000229330 RNF128Q8TEB7 428 aa12.83□□□□□ -0.36
HCFC2-201ENST00000229330 WDFY2Q96P53 400 aa12.83□□□□□ -0.36
HCFC2-201ENST00000229330 SERINC2Q96SA4 455 aa12.83□□□□□ -0.36
HCFC2-201ENST00000229330 NMNAT2Q9BZQ4 307 aa12.83□□□□□ -0.36
HCFC2-201ENST00000229330 GAREM1Q9H706 876 aa12.83□□□□□ -0.36
HCFC2-201ENST00000229330 CHST2Q9Y4C5 530 aa12.83□□□□□ -0.36
HCFC2-201ENST00000229330 CTSCP53634 463 aa12.82□□□□□ -0.36
HCFC2-201ENST00000229330 CRMP1Q14194 572 aa12.82□□□□□ -0.36
HCFC2-201ENST00000229330 CARD17Q5XLA6 110 aa12.82□□□□□ -0.36
HCFC2-201ENST00000229330 CSNK1A1LQ8N752 337 aa12.82□□□□□ -0.36
HCFC2-201ENST00000229330 C12orf76Q8N812 135 aaPredicted RBP12.82□□□□□ -0.36
HCFC2-201ENST00000229330 OR56B2PQ8NGI1 322 aa12.82□□□□□ -0.36
HCFC2-201ENST00000229330 OR5D14Q8NGL3 314 aa12.82□□□□□ -0.36
HCFC2-201ENST00000229330 FAM213BQ8TBF2 198 aa12.82□□□□□ -0.36
HCFC2-201ENST00000229330 RRNAD1Q96FB5 475 aaKnown RBP12.82□□□□□ -0.36
HCFC2-201ENST00000229330 PTCHD1Q96NR3 888 aa12.82□□□□□ -0.36
HCFC2-201ENST00000229330 ATF6BQ99941 703 aa12.82□□□□□ -0.36
HCFC2-201ENST00000229330 MCOLN1Q9GZU1 580 aa12.82□□□□□ -0.36
HCFC2-201ENST00000229330 EVA1AQ9H8M9 152 aa12.82□□□□□ -0.36
HCFC2-201ENST00000229330 ELOVL3Q9HB03 270 aa12.82□□□□□ -0.36
HCFC2-201ENST00000229330 HRASLSQ9HDD0 168 aa12.82□□□□□ -0.36
HCFC2-201ENST00000229330 STEAP1Q9UHE8 339 aa12.82□□□□□ -0.36
HCFC2-201ENST00000229330 SYT5O00445 386 aa12.82□□□□□ -0.36
HCFC2-201ENST00000229330 RGS11O94810 467 aa12.82□□□□□ -0.36
HCFC2-201ENST00000229330 HOXB2P14652 356 aa12.82□□□□□ -0.36
HCFC2-201ENST00000229330 TPBGQ13641 420 aa12.82□□□□□ -0.36
HCFC2-201ENST00000229330 CCNJQ5T5M9 372 aa12.82□□□□□ -0.36
HCFC2-201ENST00000229330 MEX3BQ6ZN04 569 aaKnown RBP12.82□□□□□ -0.36
HCFC2-201ENST00000229330 HSD11B1LQ7Z5J1 315 aa12.82□□□□□ -0.36
HCFC2-201ENST00000229330 ANKRD19PQ9H560 264 aa12.82□□□□□ -0.36
HCFC2-201ENST00000229330 TO15178 435 aa12.82□□□□□ -0.36
HCFC2-201ENST00000229330 EMP2P54851 167 aa12.82□□□□□ -0.36
HCFC2-201ENST00000229330 TLE3Q04726 772 aa12.82□□□□□ -0.36
HCFC2-201ENST00000229330 PLCXD2Q0VAA5 305 aa12.82□□□□□ -0.36
HCFC2-201ENST00000229330 TTLL10Q6ZVT0 673 aa12.82□□□□□ -0.36
HCFC2-201ENST00000229330 SLC38A6Q8IZM9 456 aa12.82□□□□□ -0.36
HCFC2-201ENST00000229330 KCNRGQ8N5I3 272 aa12.82□□□□□ -0.36
HCFC2-201ENST00000229330 TMEM106AQ96A25 262 aa12.82□□□□□ -0.36
HCFC2-201ENST00000229330 PLEKHJ1Q9NW61 149 aa12.82□□□□□ -0.36
HCFC2-201ENST00000229330 CPNE7Q9UBL6 633 aa12.82□□□□□ -0.36
HCFC2-201ENST00000229330 SNRPGP15A8MWD9 76 aa12.82□□□□□ -0.36
HCFC2-201ENST00000229330 AIPO00170 330 aa12.82□□□□□ -0.36
HCFC2-201ENST00000229330 TYRP1P17643 537 aa12.82□□□□□ -0.36
HCFC2-201ENST00000229330 HTR2CP28335 458 aa12.82□□□□□ -0.36
HCFC2-201ENST00000229330 SLC6A11P48066 632 aa12.82□□□□□ -0.36
HCFC2-201ENST00000229330 TM4SF4P48230 202 aa12.82□□□□□ -0.36
HCFC2-201ENST00000229330 HTRA4P83105 476 aaPredicted RBP12.82□□□□□ -0.36
HCFC2-201ENST00000229330 CAMK2DQ13557 499 aa12.82□□□□□ -0.36
HCFC2-201ENST00000229330 ACSM5Q6NUN0 579 aa12.82□□□□□ -0.36
HCFC2-201ENST00000229330 ACOT7LQ6ZUV0 252 aa12.82□□□□□ -0.36
HCFC2-201ENST00000229330 OR4D6Q8NGJ1 314 aa12.82□□□□□ -0.36
HCFC2-201ENST00000229330 CHTF18Q8WVB6 975 aa12.82□□□□□ -0.36
HCFC2-201ENST00000229330 OCSTAMPQ9BR26 566 aa12.82□□□□□ -0.36
HCFC2-201ENST00000229330 LEUTXA8MZ59 168 aa12.81□□□□□ -0.36
HCFC2-201ENST00000229330 STK17BO94768 372 aa12.81□□□□□ -0.36
HCFC2-201ENST00000229330 HNRNPA1P09651 372 aaKnown RBP eCLIP12.81□□□□□ -0.36
HCFC2-201ENST00000229330 ZNF44P15621 663 aa12.81□□□□□ -0.36
HCFC2-201ENST00000229330 GLO1Q04760 184 aa12.81□□□□□ -0.36
HCFC2-201ENST00000229330 KIAA1958Q8N8K9 716 aa12.81□□□□□ -0.36
HCFC2-201ENST00000229330 NINJ1Q92982 152 aa12.81□□□□□ -0.36
HCFC2-201ENST00000229330 SAMD10Q9BYL1 202 aa12.81□□□□□ -0.36
HCFC2-201ENST00000229330 UBQLN3Q9H347 655 aa12.81□□□□□ -0.36
HCFC2-201ENST00000229330 FBRSQ9HAH7 460 aa12.81□□□□□ -0.36
HCFC2-201ENST00000229330 SLC22A11Q9NSA0 550 aa12.81□□□□□ -0.36
HCFC2-201ENST00000229330 EHFQ9NZC4 300 aa12.81□□□□□ -0.36
HCFC2-201ENST00000229330 SLC14A1Q13336 389 aa12.81□□□□□ -0.36
HCFC2-201ENST00000229330 SLCO4C1Q6ZQN7 724 aa12.81□□□□□ -0.36
HCFC2-201ENST00000229330 DPPA2Q7Z7J5 298 aa12.81□□□□□ -0.36
HCFC2-201ENST00000229330 RAB39BQ96DA2 213 aa12.81□□□□□ -0.36
HCFC2-201ENST00000229330 C20orf24Q9BUV8 137 aa12.81□□□□□ -0.36
HCFC2-201ENST00000229330 CWH43Q9H720 699 aa12.81□□□□□ -0.36
HCFC2-201ENST00000229330 SCPEP1Q9HB40 452 aa12.81□□□□□ -0.36
HCFC2-201ENST00000229330 LHX3Q9UBR4 397 aa12.81□□□□□ -0.36
HCFC2-201ENST00000229330 REV1Q9UBZ9 1251 aa12.81□□□□□ -0.36
HCFC2-201ENST00000229330 MAST2Q6P0Q8 1798 aa12.81□□□□□ -0.36
HCFC2-201ENST00000229330 B3GALT4O96024 378 aa12.81□□□□□ -0.36
HCFC2-201ENST00000229330 TAGLN2P37802 199 aaKnown RBP12.81□□□□□ -0.36
HCFC2-201ENST00000229330 ZNF705AQ6ZN79 300 aaPredicted RBP12.81□□□□□ -0.36
HCFC2-201ENST00000229330 RBM45Q8IUH3 476 aaKnown RBP12.81□□□□□ -0.36
HCFC2-201ENST00000229330 SPHK1Q9NYA1 384 aa12.81□□□□□ -0.36
HCFC2-201ENST00000229330 TGM5O43548 720 aa12.81□□□□□ -0.36
HCFC2-201ENST00000229330 KLK8O60259 260 aa12.81□□□□□ -0.36
HCFC2-201ENST00000229330 TXNDC12O95881 172 aa12.81□□□□□ -0.36
HCFC2-201ENST00000229330 RD3LP0DJH9 198 aa12.81□□□□□ -0.36
HCFC2-201ENST00000229330 MGMTP16455 207 aa12.81□□□□□ -0.36
HCFC2-201ENST00000229330 HOXD9P28356 352 aaPredicted RBP12.81□□□□□ -0.36
HCFC2-201ENST00000229330 ARHGAP19Q14CB8 494 aa12.81□□□□□ -0.36
HCFC2-201ENST00000229330 METTL27Q8N6F8 245 aaPredicted RBP12.81□□□□□ -0.36
HCFC2-201ENST00000229330 OR1S1Q8NH92 325 aa12.81□□□□□ -0.36
HCFC2-201ENST00000229330 MIB2Q96AX9 1013 aa12.81□□□□□ -0.36
HCFC2-201ENST00000229330 NICN1Q9BSH3 213 aa12.81□□□□□ -0.36
HCFC2-201ENST00000229330 CHST8Q9H2A9 424 aa12.81□□□□□ -0.36
HCFC2-201ENST00000229330 TNFSF12-TNFSF13A0A0A6YY99 330 aa12.81□□□□□ -0.36
HCFC2-201ENST00000229330 TMEM72A0PK05 275 aa12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms