RNA–Protein interactions for RNA: ENST00000228827.7

GPN3-201, Transcript of GPN-loop GTPase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GPN3, Length 1,468 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPN3-201ENST00000228827 NF1P21359 2839 aa12.49□□□□□ -0.41
GPN3-201ENST00000228827 FTCDNL1E5RQL4 147 aa12.49□□□□□ -0.41
GPN3-201ENST00000228827 SERPINB7O75635 380 aa12.49□□□□□ -0.41
GPN3-201ENST00000228827 OPN1SWP03999 348 aa12.49□□□□□ -0.41
GPN3-201ENST00000228827 DANCRP0C864 163 aa12.49□□□□□ -0.41
GPN3-201ENST00000228827 MPGP29372 298 aa12.49□□□□□ -0.41
GPN3-201ENST00000228827 CDKN1AP38936 164 aa12.49□□□□□ -0.41
GPN3-201ENST00000228827 SELENOPP49908 381 aa12.49□□□□□ -0.41
GPN3-201ENST00000228827 RGS8P57771 180 aaPredicted RBP12.49□□□□□ -0.41
GPN3-201ENST00000228827 NIPAL3Q6P499 406 aa12.49□□□□□ -0.41
GPN3-201ENST00000228827 KLHL17Q6TDP4 642 aa12.49□□□□□ -0.41
GPN3-201ENST00000228827 CREB3L2Q70SY1 520 aa12.49□□□□□ -0.41
GPN3-201ENST00000228827 SSX8Q7RTT4 187 aa12.49□□□□□ -0.41
GPN3-201ENST00000228827 BIVMQ86UB2 503 aa12.49□□□□□ -0.41
GPN3-201ENST00000228827 EPHX4Q8IUS5 362 aa12.49□□□□□ -0.41
GPN3-201ENST00000228827 C11orf65Q8NCR3 313 aa12.49□□□□□ -0.41
GPN3-201ENST00000228827 TAAR8Q969N4 342 aa12.49□□□□□ -0.41
GPN3-201ENST00000228827 GTPBP3Q969Y2 492 aaKnown RBP12.49□□□□□ -0.41
GPN3-201ENST00000228827 SLCO5A1Q9H2Y9 848 aa12.49□□□□□ -0.41
GPN3-201ENST00000228827 ZNF701Q9NV72 531 aaPredicted RBP12.49□□□□□ -0.41
GPN3-201ENST00000228827 MED13LQ71F56 2210 aa12.49□□□□□ -0.41
GPN3-201ENST00000228827 IGKV1D-42A0A075B6H8 117 aa12.48□□□□□ -0.41
GPN3-201ENST00000228827 MFN2O95140 757 aa12.48□□□□□ -0.41
GPN3-201ENST00000228827 VAMP5O95183 116 aa12.48□□□□□ -0.41
GPN3-201ENST00000228827 TROVE2P10155 538 aaKnown RBP eCLIP12.48□□□□□ -0.41
GPN3-201ENST00000228827 PAX1P15863 534 aa12.48□□□□□ -0.41
GPN3-201ENST00000228827 CD40P25942 277 aa12.48□□□□□ -0.41
GPN3-201ENST00000228827 SLC25A3Q00325 362 aa12.48□□□□□ -0.41
GPN3-201ENST00000228827 IL1RL1Q01638 556 aa12.48□□□□□ -0.41
GPN3-201ENST00000228827 TGFBR3Q03167 851 aa12.48□□□□□ -0.41
GPN3-201ENST00000228827 OR1Q1Q15612 314 aa12.48□□□□□ -0.41
GPN3-201ENST00000228827 PGGHGQ32M88 737 aa12.48□□□□□ -0.41
GPN3-201ENST00000228827 HIKESHIQ53FT3 197 aa12.48□□□□□ -0.41
GPN3-201ENST00000228827 SLC22A25Q6T423 547 aa12.48□□□□□ -0.41
GPN3-201ENST00000228827 C6orf89Q6UWU4 347 aa12.48□□□□□ -0.41
GPN3-201ENST00000228827 TMEM108Q6UXF1 575 aa12.48□□□□□ -0.41
GPN3-201ENST00000228827 CLEC9AQ6UXN8 241 aa12.48□□□□□ -0.41
GPN3-201ENST00000228827 LSMEM1Q8N8F7 131 aa12.48□□□□□ -0.41
GPN3-201ENST00000228827 DNAJA4Q8WW22 397 aaPredicted RBP12.48□□□□□ -0.41
GPN3-201ENST00000228827 SLC38A4Q969I6 547 aa12.48□□□□□ -0.41
GPN3-201ENST00000228827 ALKBH3Q96Q83 286 aaPredicted RBP12.48□□□□□ -0.41
GPN3-201ENST00000228827 BDH2Q9BUT1 245 aa12.48□□□□□ -0.41
GPN3-201ENST00000228827 PIF1Q9H611 641 aa12.48□□□□□ -0.41
GPN3-201ENST00000228827 C12orf10Q9HB07 376 aa12.48□□□□□ -0.41
GPN3-201ENST00000228827 TMEM27Q9HBJ8 222 aa12.48□□□□□ -0.41
GPN3-201ENST00000228827 SLC17A5Q9NRA2 495 aa12.48□□□□□ -0.41
GPN3-201ENST00000228827 FGFR1OP2Q9NVK5 253 aa12.48□□□□□ -0.41
GPN3-201ENST00000228827 ZNF446Q9NWS9 450 aa12.48□□□□□ -0.41
GPN3-201ENST00000228827 SELENONQ9NZV5 590 aa12.48□□□□□ -0.41
GPN3-201ENST00000228827 TESQ9UGI8 421 aaKnown RBP12.48□□□□□ -0.41
GPN3-201ENST00000228827 POU2F3Q9UKI9 436 aa12.48□□□□□ -0.41
GPN3-201ENST00000228827 RAI1Q7Z5J4 1906 aaPredicted RBP12.48□□□□□ -0.41
GPN3-201ENST00000228827 TRAV36DV7A0A075B6V5 113 aa12.47□□□□□ -0.41
GPN3-201ENST00000228827 M0R082 166 aa12.47□□□□□ -0.41
GPN3-201ENST00000228827 M0R3H8 397 aa12.47□□□□□ -0.41
GPN3-201ENST00000228827 TPST2O60704 377 aa12.47□□□□□ -0.41
GPN3-201ENST00000228827 TMCC2O75069 709 aa12.47□□□□□ -0.41
GPN3-201ENST00000228827 LGI1O95970 557 aa12.47□□□□□ -0.41
GPN3-201ENST00000228827 PTAFRP25105 342 aa12.47□□□□□ -0.41
GPN3-201ENST00000228827 GRPRP30550 384 aa12.47□□□□□ -0.41
GPN3-201ENST00000228827 CLDN17P56750 224 aa12.47□□□□□ -0.41
GPN3-201ENST00000228827 METTL21CQ5VZV1 264 aa12.47□□□□□ -0.41
GPN3-201ENST00000228827 ULK3Q6PHR2 472 aa12.47□□□□□ -0.41
GPN3-201ENST00000228827 RANBP3LQ86VV4 465 aaPredicted RBP12.47□□□□□ -0.41
GPN3-201ENST00000228827 POMGNT2Q8NAT1 580 aa12.47□□□□□ -0.41
GPN3-201ENST00000228827 BHLHE22Q8NFJ8 381 aaPredicted RBP12.47□□□□□ -0.41
GPN3-201ENST00000228827 ZNF417Q8TAU3 575 aa12.47□□□□□ -0.41
GPN3-201ENST00000228827 SLC47A1Q96FL8 570 aa12.47□□□□□ -0.41
GPN3-201ENST00000228827 COX4I2Q96KJ9 171 aa12.47□□□□□ -0.41
GPN3-201ENST00000228827 ZNF587Q96SQ5 575 aaPredicted RBP12.47□□□□□ -0.41
GPN3-201ENST00000228827 AMBRA1Q9C0C7 1298 aa12.47□□□□□ -0.41
GPN3-201ENST00000228827 ALG2Q9H553 416 aa12.47□□□□□ -0.41
GPN3-201ENST00000228827 AMDHD2Q9Y303 409 aa12.47□□□□□ -0.41
GPN3-201ENST00000228827 ZNF587BE7ETH6 402 aa12.46□□□□□ -0.41
GPN3-201ENST00000228827 M0QX08 132 aa12.46□□□□□ -0.41
GPN3-201ENST00000228827 OVOL3O00110 214 aa12.46□□□□□ -0.41
GPN3-201ENST00000228827 FBP2O00757 339 aa12.46□□□□□ -0.41
GPN3-201ENST00000228827 AIM2O14862 343 aa12.46□□□□□ -0.41
GPN3-201ENST00000228827 OR2T1O43869 369 aa12.46□□□□□ -0.41
GPN3-201ENST00000228827 UPK3AO75631 287 aa12.46□□□□□ -0.41
GPN3-201ENST00000228827 VIMP08670 466 aaKnown RBP12.46□□□□□ -0.41
GPN3-201ENST00000228827 ZNF43P17038 809 aa12.46□□□□□ -0.41
GPN3-201ENST00000228827 ARFIP2P53365 341 aa12.46□□□□□ -0.41
GPN3-201ENST00000228827 PCBP3P57721 371 aaKnown RBP12.46□□□□□ -0.41
GPN3-201ENST00000228827 RBBP4Q09028 425 aa12.46□□□□□ -0.41
GPN3-201ENST00000228827 C1DQ13901 141 aaKnown RBP12.46□□□□□ -0.41
GPN3-201ENST00000228827 FAM69AQ5T7M9 428 aa12.46□□□□□ -0.41
GPN3-201ENST00000228827 FAM91A1Q658Y4 838 aa12.46□□□□□ -0.41
GPN3-201ENST00000228827 CGB2Q6NT52 195 aa12.46□□□□□ -0.41
GPN3-201ENST00000228827 LINGO2Q7L985 606 aa12.46□□□□□ -0.41
GPN3-201ENST00000228827 ABHD12BQ7Z5M8 362 aaPredicted RBP12.46□□□□□ -0.41
GPN3-201ENST00000228827 C17orf78Q8N4C9 275 aa12.46□□□□□ -0.41
GPN3-201ENST00000228827 C1orf162Q8NEQ5 155 aaPredicted RBP12.46□□□□□ -0.41
GPN3-201ENST00000228827 GPR32P1Q8NGA4 272 aa12.46□□□□□ -0.41
GPN3-201ENST00000228827 OR10A6Q8NH74 314 aa12.46□□□□□ -0.41
GPN3-201ENST00000228827 VANGL1Q8TAA9 524 aaPredicted RBP12.46□□□□□ -0.41
GPN3-201ENST00000228827 TSPEARQ8WU66 669 aa12.46□□□□□ -0.41
GPN3-201ENST00000228827 TRMT61AQ96FX7 289 aaKnown RBP12.46□□□□□ -0.41
GPN3-201ENST00000228827 MCHR1Q99705 422 aa12.46□□□□□ -0.41
GPN3-201ENST00000228827 TRAF4Q9BUZ4 470 aaPredicted RBP12.46□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms