RNA–Protein interactions for RNA: ENST00000217402.2

CHMP4B-201, Transcript of charged multivesicular body protein 4B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP4B, Length 1,646 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4B-201ENST00000217402 ARRDC5A6NEK1 342 aa24.37■■□□□ 1.49
CHMP4B-201ENST00000217402 DNPH1O43598 174 aa24.37■■□□□ 1.49
CHMP4B-201ENST00000217402 HIST1H2ABP04908 130 aa24.37■■□□□ 1.49
CHMP4B-201ENST00000217402 ASAH2BP0C7U1 165 aa24.37■■□□□ 1.49
CHMP4B-201ENST00000217402 PAQR6Q6TCH4 344 aa24.37■■□□□ 1.49
CHMP4B-201ENST00000217402 Q6ZPB1 254 aaPredicted RBP24.37■■□□□ 1.49
CHMP4B-201ENST00000217402 HIST3H2AQ7L7L0 130 aa24.37■■□□□ 1.49
CHMP4B-201ENST00000217402 NANOGNBQ7Z5D8 188 aa24.37■■□□□ 1.49
CHMP4B-201ENST00000217402 CCDC103Q8IW40 242 aa24.37■■□□□ 1.49
CHMP4B-201ENST00000217402 ATG16L2Q8NAA4 619 aa24.37■■□□□ 1.49
CHMP4B-201ENST00000217402 GNPDA2Q8TDQ7 276 aa24.37■■□□□ 1.49
CHMP4B-201ENST00000217402 HIST1H2ACQ93077 130 aa24.37■■□□□ 1.49
CHMP4B-201ENST00000217402 NIPSNAP1Q9BPW8 284 aa24.37■■□□□ 1.49
CHMP4B-201ENST00000217402 KIF17Q9P2E2 1029 aa24.37■■□□□ 1.49
CHMP4B-201ENST00000217402 CORINQ9Y5Q5 1042 aa24.37■■□□□ 1.49
CHMP4B-201ENST00000217402 TRAV27A0A087WT01 109 aa24.36■■□□□ 1.49
CHMP4B-201ENST00000217402 SLC22A20A6NK97 555 aa24.36■■□□□ 1.49
CHMP4B-201ENST00000217402 KLF4O43474 513 aa24.36■■□□□ 1.49
CHMP4B-201ENST00000217402 EIF1BO60739 113 aaKnown RBP24.36■■□□□ 1.49
CHMP4B-201ENST00000217402 GABRA1P14867 456 aa24.36■■□□□ 1.49
CHMP4B-201ENST00000217402 FPR3P25089 353 aa24.36■■□□□ 1.49
CHMP4B-201ENST00000217402 ACVR2AP27037 513 aa24.36■■□□□ 1.49
CHMP4B-201ENST00000217402 GTF3C1Q12789 2109 aa24.36■■□□□ 1.49
CHMP4B-201ENST00000217402 PMS2P3Q13401 168 aa24.36■■□□□ 1.49
CHMP4B-201ENST00000217402 TRIP10Q15642 601 aa24.36■■□□□ 1.49
CHMP4B-201ENST00000217402 OAFQ86UD1 273 aa24.36■■□□□ 1.49
CHMP4B-201ENST00000217402 ZGRF1Q86YA3 2104 aa24.36■■□□□ 1.49
CHMP4B-201ENST00000217402 OR51A7Q8NH64 312 aa24.36■■□□□ 1.49
CHMP4B-201ENST00000217402 TP63Q9H3D4 680 aaPredicted RBP24.36■■□□□ 1.49
CHMP4B-201ENST00000217402 CHST11Q9NPF2 352 aa24.36■■□□□ 1.49
CHMP4B-201ENST00000217402 MGAT4BQ9UQ53 548 aa24.36■■□□□ 1.49
CHMP4B-201ENST00000217402 OSGIN2Q9Y236 505 aa24.36■■□□□ 1.49
CHMP4B-201ENST00000217402 RAMP1O60894 148 aa24.35■■□□□ 1.49
CHMP4B-201ENST00000217402 TGM6O95932 706 aa24.35■■□□□ 1.49
CHMP4B-201ENST00000217402 AGFG1P52594 562 aaKnown RBP24.35■■□□□ 1.49
CHMP4B-201ENST00000217402 C1orf185Q5T7R7 199 aa24.35■■□□□ 1.49
CHMP4B-201ENST00000217402 RTL6Q6ICC9 239 aa24.35■■□□□ 1.49
CHMP4B-201ENST00000217402 FCRLAQ7L513 359 aa24.35■■□□□ 1.49
CHMP4B-201ENST00000217402 ADGRE4PQ86SQ3 457 aa24.35■■□□□ 1.49
CHMP4B-201ENST00000217402 OR5J2Q8NH18 312 aa24.35■■□□□ 1.49
CHMP4B-201ENST00000217402 LIPHQ8WWY8 451 aa24.35■■□□□ 1.49
CHMP4B-201ENST00000217402 PSD2Q9BQI7 771 aa24.35■■□□□ 1.49
CHMP4B-201ENST00000217402 NAA11Q9BSU3 229 aaPredicted RBP24.35■■□□□ 1.49
CHMP4B-201ENST00000217402 SMURF2Q9HAU4 748 aa24.35■■□□□ 1.49
CHMP4B-201ENST00000217402 MRPL39Q9NYK5 338 aaKnown RBP24.35■■□□□ 1.49
CHMP4B-201ENST00000217402 KLHL13Q9P2N7 655 aa24.35■■□□□ 1.49
CHMP4B-201ENST00000217402 CLCF1Q9UBD9 225 aa24.35■■□□□ 1.49
CHMP4B-201ENST00000217402 FAM215AQ9Y5M1 114 aa24.35■■□□□ 1.49
CHMP4B-201ENST00000217402 TRGV8A0A0C4DH27 118 aa24.35■■□□□ 1.49
CHMP4B-201ENST00000217402 UNC119BA6NIH7 251 aa24.35■■□□□ 1.49
CHMP4B-201ENST00000217402 AQP7P3A6NL99 342 aa24.35■■□□□ 1.49
CHMP4B-201ENST00000217402 BLOC1S5-TXNDC5H3BN57 136 aa24.35■■□□□ 1.49
CHMP4B-201ENST00000217402 FZD7O75084 574 aa24.35■■□□□ 1.49
CHMP4B-201ENST00000217402 AQP8O94778 261 aa24.35■■□□□ 1.49
CHMP4B-201ENST00000217402 ATP6V1G2O95670 118 aa24.35■■□□□ 1.49
CHMP4B-201ENST00000217402 GSSP48637 474 aa24.35■■□□□ 1.49
CHMP4B-201ENST00000217402 H3F3AP84243 136 aa24.35■■□□□ 1.49
CHMP4B-201ENST00000217402 IL1RL1Q01638 556 aa24.35■■□□□ 1.49
CHMP4B-201ENST00000217402 H1FNTQ75WM6 255 aaPredicted RBP24.35■■□□□ 1.49
CHMP4B-201ENST00000217402 P4HA3Q7Z4N8 544 aa24.35■■□□□ 1.49
CHMP4B-201ENST00000217402 RPRMLQ8N4K4 120 aa24.35■■□□□ 1.49
CHMP4B-201ENST00000217402 SCAIQ8N9R8 606 aa24.35■■□□□ 1.49
CHMP4B-201ENST00000217402 EME1Q96AY2 570 aa24.35■■□□□ 1.49
CHMP4B-201ENST00000217402 DGCR6LQ9BY27 220 aa24.35■■□□□ 1.49
CHMP4B-201ENST00000217402 ZNF175Q9Y473 711 aa24.35■■□□□ 1.49
CHMP4B-201ENST00000217402 ADAP00813 363 aa24.34■■□□□ 1.49
CHMP4B-201ENST00000217402 PTGER4P35408 488 aa24.34■■□□□ 1.49
CHMP4B-201ENST00000217402 TSPAN31Q12999 210 aa24.34■■□□□ 1.49
CHMP4B-201ENST00000217402 RIPK1Q13546 671 aa24.34■■□□□ 1.49
CHMP4B-201ENST00000217402 SF3B4Q15427 424 aaKnown RBP eCLIP24.34■■□□□ 1.49
CHMP4B-201ENST00000217402 KDM8Q8N371 416 aa24.34■■□□□ 1.49
CHMP4B-201ENST00000217402 GALNT11Q8NCW6 608 aa24.34■■□□□ 1.49
CHMP4B-201ENST00000217402 ABHD3Q8WU67 409 aa24.34■■□□□ 1.49
CHMP4B-201ENST00000217402 GABARAPL1Q9H0R8 117 aa24.34■■□□□ 1.49
CHMP4B-201ENST00000217402 ZNF556Q9HAH1 456 aa24.34■■□□□ 1.49
CHMP4B-201ENST00000217402 B3GALT5Q9Y2C3 310 aa24.34■■□□□ 1.49
CHMP4B-201ENST00000217402 RP1L1Q8IWN7 2480 aaPredicted RBP24.34■■□□□ 1.49
CHMP4B-201ENST00000217402 ADORA3P0DMS8 318 aa24.33■■□□□ 1.49
CHMP4B-201ENST00000217402 ANXA8P13928 327 aa24.33■■□□□ 1.49
CHMP4B-201ENST00000217402 SLC9A3P48764 834 aa24.33■■□□□ 1.49
CHMP4B-201ENST00000217402 P2RY4P51582 365 aa24.33■■□□□ 1.49
CHMP4B-201ENST00000217402 CASP6P55212 293 aa24.33■■□□□ 1.49
CHMP4B-201ENST00000217402 SLC34A1Q06495 639 aa24.33■■□□□ 1.49
CHMP4B-201ENST00000217402 NSUN5P2Q63ZY6 315 aa24.33■■□□□ 1.49
CHMP4B-201ENST00000217402 FAHD1Q6P587 224 aa24.33■■□□□ 1.49
CHMP4B-201ENST00000217402 GPAT4Q86UL3 456 aa24.33■■□□□ 1.49
CHMP4B-201ENST00000217402 CBR4Q8N4T8 237 aa24.33■■□□□ 1.49
CHMP4B-201ENST00000217402 RNF128Q8TEB7 428 aa24.33■■□□□ 1.49
CHMP4B-201ENST00000217402 TNFRSF13CQ96RJ3 184 aa24.33■■□□□ 1.49
CHMP4B-201ENST00000217402 NBASA2RRP1 2371 aa24.33■■□□□ 1.48
CHMP4B-201ENST00000217402 KIAA1549Q9HCM3 1950 aa24.32■■□□□ 1.48
CHMP4B-201ENST00000217402 C11orf98E9PRG8 122 aa24.32■■□□□ 1.48
CHMP4B-201ENST00000217402 PLPP3O14495 311 aa24.32■■□□□ 1.48
CHMP4B-201ENST00000217402 OR6A2O95222 327 aa24.32■■□□□ 1.48
CHMP4B-201ENST00000217402 AHCYP23526 432 aa24.32■■□□□ 1.48
CHMP4B-201ENST00000217402 AQP2P41181 271 aa24.32■■□□□ 1.48
CHMP4B-201ENST00000217402 UQCRFS1P47985 274 aa24.32■■□□□ 1.48
CHMP4B-201ENST00000217402 DAPP51397 102 aa24.32■■□□□ 1.48
CHMP4B-201ENST00000217402 LRRC36Q1X8D7 754 aa24.32■■□□□ 1.48
CHMP4B-201ENST00000217402 LPCAT4Q643R3 524 aa24.32■■□□□ 1.48
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms