RNA–Protein interactions for RNA: ENST00000162749.6

TNFRSF1A-201, Transcript of TNF receptor superfamily member 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFRSF1A, Length 2,223 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-201ENST00000162749 HTR3AP46098 478 aa17.83■□□□□ 0.44
TNFRSF1A-201ENST00000162749 PRPS1P60891 318 aa17.83■□□□□ 0.44
TNFRSF1A-201ENST00000162749 SNTA1Q13424 505 aa17.83■□□□□ 0.44
TNFRSF1A-201ENST00000162749 PLBD1Q6P4A8 553 aa17.83■□□□□ 0.44
TNFRSF1A-201ENST00000162749 TMEM81Q6P7N7 255 aa17.83■□□□□ 0.44
TNFRSF1A-201ENST00000162749 USP43Q70EL4 1123 aa17.83■□□□□ 0.44
TNFRSF1A-201ENST00000162749 ATCAYQ86WG3 371 aa17.83■□□□□ 0.44
TNFRSF1A-201ENST00000162749 TMEM156Q8N614 296 aa17.83■□□□□ 0.44
TNFRSF1A-201ENST00000162749 MCFD2Q8NI22 146 aa17.83■□□□□ 0.44
TNFRSF1A-201ENST00000162749 NKD1Q969G9 470 aa17.83■□□□□ 0.44
TNFRSF1A-201ENST00000162749 FRMD6Q96NE9 622 aa17.83■□□□□ 0.44
TNFRSF1A-201ENST00000162749 CPNE5Q9HCH3 593 aa17.83■□□□□ 0.44
TNFRSF1A-201ENST00000162749 MRPS18AQ9NVS2 196 aaKnown RBP17.83■□□□□ 0.44
TNFRSF1A-201ENST00000162749 IL17BQ9UHF5 180 aa17.83■□□□□ 0.44
TNFRSF1A-201ENST00000162749 ADAM18Q9Y3Q7 739 aa17.83■□□□□ 0.44
TNFRSF1A-201ENST00000162749 SPTBN2O15020 2390 aa17.82■□□□□ 0.44
TNFRSF1A-201ENST00000162749 TNFSF12-TNFSF13A0A0A6YY99 330 aa17.82■□□□□ 0.44
TNFRSF1A-201ENST00000162749 LOC100506127A0A0U1RQW1 187 aa17.82■□□□□ 0.44
TNFRSF1A-201ENST00000162749 BLOC1S5-TXNDC5H3BN57 136 aa17.82■□□□□ 0.44
TNFRSF1A-201ENST00000162749 SERPINA7P05543 415 aa17.82■□□□□ 0.44
TNFRSF1A-201ENST00000162749 DLX5P56178 289 aa17.82■□□□□ 0.44
TNFRSF1A-201ENST00000162749 TMEM44Q2T9K0 475 aa17.82■□□□□ 0.44
TNFRSF1A-201ENST00000162749 H3F3CQ6NXT2 135 aa17.82■□□□□ 0.44
TNFRSF1A-201ENST00000162749 ARHGAP11AQ6P4F7 1023 aa17.82■□□□□ 0.44
TNFRSF1A-201ENST00000162749 SIRT6Q8N6T7 355 aa17.82■□□□□ 0.44
TNFRSF1A-201ENST00000162749 ADAMTS17Q8TE56 1095 aa17.82■□□□□ 0.44
TNFRSF1A-201ENST00000162749 RNFT2Q96EX2 444 aa17.82■□□□□ 0.44
TNFRSF1A-201ENST00000162749 DNAJA3Q96EY1 480 aa17.82■□□□□ 0.44
TNFRSF1A-201ENST00000162749 ERMAPQ96PL5 475 aaPredicted RBP17.82■□□□□ 0.44
TNFRSF1A-201ENST00000162749 SECISBP2Q96T21 854 aaKnown RBP17.82■□□□□ 0.44
TNFRSF1A-201ENST00000162749 PTDSS2Q9BVG9 487 aa17.82■□□□□ 0.44
TNFRSF1A-201ENST00000162749 HCAR1Q9BXC0 346 aa17.82■□□□□ 0.44
TNFRSF1A-201ENST00000162749 NRIP3Q9NQ35 241 aa17.82■□□□□ 0.44
TNFRSF1A-201ENST00000162749 CLEC2DQ9UHP7 191 aa17.82■□□□□ 0.44
TNFRSF1A-201ENST00000162749 TRAV36DV7A0A075B6V5 113 aa17.82■□□□□ 0.44
TNFRSF1A-201ENST00000162749 ETV2O00321 342 aaPredicted RBP17.82■□□□□ 0.44
TNFRSF1A-201ENST00000162749 TM4SF5O14894 197 aa17.82■□□□□ 0.44
TNFRSF1A-201ENST00000162749 RPL4P36578 427 aaKnown RBP17.82■□□□□ 0.44
TNFRSF1A-201ENST00000162749 RAB40BQ12829 278 aa17.82■□□□□ 0.44
TNFRSF1A-201ENST00000162749 SSX1Q16384 188 aa17.82■□□□□ 0.44
TNFRSF1A-201ENST00000162749 TSTQ16762 297 aaKnown RBP17.82■□□□□ 0.44
TNFRSF1A-201ENST00000162749 ZNF404Q494X3 552 aa17.82■□□□□ 0.44
TNFRSF1A-201ENST00000162749 ZNF468Q5VIY5 522 aaPredicted RBP17.82■□□□□ 0.44
TNFRSF1A-201ENST00000162749 DND1Q8IYX4 353 aaKnown RBP17.82■□□□□ 0.44
TNFRSF1A-201ENST00000162749 WDSUB1Q8N9V3 476 aa17.82■□□□□ 0.44
TNFRSF1A-201ENST00000162749 OR52I1Q8NGK6 324 aa17.82■□□□□ 0.44
TNFRSF1A-201ENST00000162749 MOSPD2Q8NHP6 518 aa17.82■□□□□ 0.44
TNFRSF1A-201ENST00000162749 OTULINQ96BN8 352 aa17.82■□□□□ 0.44
TNFRSF1A-201ENST00000162749 GPX7Q96SL4 187 aaPredicted RBP17.82■□□□□ 0.44
TNFRSF1A-201ENST00000162749 CHCHD6Q9BRQ6 235 aa17.82■□□□□ 0.44
TNFRSF1A-201ENST00000162749 MED20Q9H944 212 aa17.82■□□□□ 0.44
TNFRSF1A-201ENST00000162749 FKRPQ9H9S5 495 aa17.82■□□□□ 0.44
TNFRSF1A-201ENST00000162749 SH2D2AQ9NP31 389 aa17.82■□□□□ 0.44
TNFRSF1A-201ENST00000162749 ZNF229Q9UJW7 825 aa17.82■□□□□ 0.44
TNFRSF1A-201ENST00000162749 LSM2Q9Y333 95 aaKnown RBP17.82■□□□□ 0.44
TNFRSF1A-201ENST00000162749 PCDHGB6Q9Y5F9 930 aa17.82■□□□□ 0.44
TNFRSF1A-201ENST00000162749 A8MVM7 634 aa17.81■□□□□ 0.44
TNFRSF1A-201ENST00000162749 IQCJ-SCHIP1C9J366 451 aaPredicted RBP17.81■□□□□ 0.44
TNFRSF1A-201ENST00000162749 APOL3O95236 402 aa17.81■□□□□ 0.44
TNFRSF1A-201ENST00000162749 CCL3P10147 92 aa17.81■□□□□ 0.44
TNFRSF1A-201ENST00000162749 UQCRC1P31930 480 aa17.81■□□□□ 0.44
TNFRSF1A-201ENST00000162749 AQP2P41181 271 aa17.81■□□□□ 0.44
TNFRSF1A-201ENST00000162749 DBPQ10586 325 aaPredicted RBP17.81■□□□□ 0.44
TNFRSF1A-201ENST00000162749 B3GNTL1Q67FW5 361 aaPredicted RBP17.81■□□□□ 0.44
TNFRSF1A-201ENST00000162749 DPY19L2P2Q6ZN68 376 aa17.81■□□□□ 0.44
TNFRSF1A-201ENST00000162749 IL22RA1Q8N6P7 574 aa17.81■□□□□ 0.44
TNFRSF1A-201ENST00000162749 PAQR8Q8TEZ7 354 aa17.81■□□□□ 0.44
TNFRSF1A-201ENST00000162749 OPALINQ96PE5 141 aa17.81■□□□□ 0.44
TNFRSF1A-201ENST00000162749 OR11A1Q9GZK7 315 aa17.81■□□□□ 0.44
TNFRSF1A-201ENST00000162749 HPF1Q9NWY4 346 aa17.81■□□□□ 0.44
TNFRSF1A-201ENST00000162749 FBXL2Q9UKC9 423 aa17.81■□□□□ 0.44
TNFRSF1A-201ENST00000162749 DIMT1Q9UNQ2 313 aaKnown RBP17.81■□□□□ 0.44
TNFRSF1A-201ENST00000162749 IER3IP1Q9Y5U9 82 aa17.81■□□□□ 0.44
TNFRSF1A-201ENST00000162749 RIIAD1A6NNX1 92 aa17.8■□□□□ 0.44
TNFRSF1A-201ENST00000162749 CDRT15L2A8MXV6 281 aa17.8■□□□□ 0.44
TNFRSF1A-201ENST00000162749 BGLAPP02818 100 aa17.8■□□□□ 0.44
TNFRSF1A-201ENST00000162749 TSPAN19P0C672 248 aa17.8■□□□□ 0.44
TNFRSF1A-201ENST00000162749 ZNF3P17036 446 aa17.8■□□□□ 0.44
TNFRSF1A-201ENST00000162749 HTR1FP30939 366 aa17.8■□□□□ 0.44
TNFRSF1A-201ENST00000162749 FOXF1Q12946 379 aa17.8■□□□□ 0.44
TNFRSF1A-201ENST00000162749 CRMP1Q14194 572 aa17.8■□□□□ 0.44
TNFRSF1A-201ENST00000162749 PLPPR5Q32ZL2 321 aa17.8■□□□□ 0.44
TNFRSF1A-201ENST00000162749 KLHL22Q53GT1 634 aa17.8■□□□□ 0.44
TNFRSF1A-201ENST00000162749 NIPAL3Q6P499 406 aa17.8■□□□□ 0.44
TNFRSF1A-201ENST00000162749 RAB43Q86YS6 212 aa17.8■□□□□ 0.44
TNFRSF1A-201ENST00000162749 OR2M3Q8NG83 312 aa17.8■□□□□ 0.44
TNFRSF1A-201ENST00000162749 PTP4A1Q93096 173 aa17.8■□□□□ 0.44
TNFRSF1A-201ENST00000162749 CDADC1Q9BWV3 514 aa17.8■□□□□ 0.44
TNFRSF1A-201ENST00000162749 MMP27Q9H306 513 aa17.8■□□□□ 0.44
TNFRSF1A-201ENST00000162749 CEACAM1P13688 526 aa17.8■□□□□ 0.44
TNFRSF1A-201ENST00000162749 HIST1H1CP16403 213 aaKnown RBP17.8■□□□□ 0.44
TNFRSF1A-201ENST00000162749 HK1P19367 917 aa17.8■□□□□ 0.44
TNFRSF1A-201ENST00000162749 APOBEC1P41238 236 aaKnown RBP17.8■□□□□ 0.44
TNFRSF1A-201ENST00000162749 ZNF41P51814 821 aaPredicted RBP17.8■□□□□ 0.44
TNFRSF1A-201ENST00000162749 FAM69AQ5T7M9 428 aa17.8■□□□□ 0.44
TNFRSF1A-201ENST00000162749 C1orf140Q5VVS0 124 aa17.8■□□□□ 0.44
TNFRSF1A-201ENST00000162749 DTX1Q86Y01 620 aa17.8■□□□□ 0.44
TNFRSF1A-201ENST00000162749 CYB561A3Q8NBI2 242 aa17.8■□□□□ 0.44
TNFRSF1A-201ENST00000162749 PSMF1Q92530 271 aa17.8■□□□□ 0.44
TNFRSF1A-201ENST00000162749 KATNB1Q9BVA0 655 aa17.8■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms