RNA–Protein interactions for RNA: ENSMUST00000053440.7

Ccdc40-202, Transcript of Coiled-coil domain-containing protein 40, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Ccdc40, Length 3,524 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc40-202ENSMUST00000053440 Slc6a5Q761V0 799 aa9.05□□□□□ -0.96
Ccdc40-202ENSMUST00000053440 Scgb1c1Q7M742 95 aa9.05□□□□□ -0.96
Ccdc40-202ENSMUST00000053440 Olfr304Q7TS03 333 aa9.05□□□□□ -0.96
Ccdc40-202ENSMUST00000053440 Noxa1Q8CJ00 444 aa9.05□□□□□ -0.96
Ccdc40-202ENSMUST00000053440 Klf11Q8K1S5 502 aa9.05□□□□□ -0.96
Ccdc40-202ENSMUST00000053440 Grhl2Q8K5C0 625 aa9.05□□□□□ -0.96
Ccdc40-202ENSMUST00000053440 Vmn1r74Q8R290 304 aa9.05□□□□□ -0.96
Ccdc40-202ENSMUST00000053440 Wdr45Q91VM3 360 aa9.05□□□□□ -0.96
Ccdc40-202ENSMUST00000053440 Mrgpra1Q91WW5 304 aa9.05□□□□□ -0.96
Ccdc40-202ENSMUST00000053440 Sfxn2Q925N2 322 aa9.05□□□□□ -0.96
Ccdc40-202ENSMUST00000053440 Smarcd2Q99JR8 531 aaKnown RBP9.05□□□□□ -0.96
Ccdc40-202ENSMUST00000053440 Sucnr1Q99MT6 317 aa9.05□□□□□ -0.96
Ccdc40-202ENSMUST00000053440 Med31Q9CXU1 131 aaKnown RBP9.05□□□□□ -0.96
Ccdc40-202ENSMUST00000053440 Ceacam20Q9D2Z1 577 aa9.05□□□□□ -0.96
Ccdc40-202ENSMUST00000053440 Sh3bgrlQ9JJU8 114 aaKnown RBP9.05□□□□□ -0.96
Ccdc40-202ENSMUST00000053440 Btbd2E9PUS2 523 aa9.05□□□□□ -0.96
Ccdc40-202ENSMUST00000053440 Gm9008E9PVG0 424 aa9.05□□□□□ -0.96
Ccdc40-202ENSMUST00000053440 Vmn2r108E9PYS0 855 aa9.05□□□□□ -0.96
Ccdc40-202ENSMUST00000053440 Ms4a7E9Q9V5 267 aa9.05□□□□□ -0.96
Ccdc40-202ENSMUST00000053440 CtssO70370 340 aa9.05□□□□□ -0.96
Ccdc40-202ENSMUST00000053440 Xrcc1Q60596 631 aa9.05□□□□□ -0.96
Ccdc40-202ENSMUST00000053440 Nr0b1Q61066 472 aa9.05□□□□□ -0.96
Ccdc40-202ENSMUST00000053440 NnatQ61979 81 aa9.05□□□□□ -0.96
Ccdc40-202ENSMUST00000053440 Tha1Q6XPS7 400 aa9.05□□□□□ -0.96
Ccdc40-202ENSMUST00000053440 Olfr843Q7TRG4 313 aa9.05□□□□□ -0.96
Ccdc40-202ENSMUST00000053440 Avl9Q80U56 649 aa9.05□□□□□ -0.96
Ccdc40-202ENSMUST00000053440 Rnf26Q8BUH7 424 aa9.05□□□□□ -0.96
Ccdc40-202ENSMUST00000053440 Mettl21eQ8CDZ2 244 aa9.05□□□□□ -0.96
Ccdc40-202ENSMUST00000053440 Mboat2Q8R3I2 519 aa9.05□□□□□ -0.96
Ccdc40-202ENSMUST00000053440 Tmem5Q8VDX6 444 aa9.05□□□□□ -0.96
Ccdc40-202ENSMUST00000053440 Olfr99Q8VFE4 305 aa9.05□□□□□ -0.96
Ccdc40-202ENSMUST00000053440 Exosc5Q9CRA8 235 aa9.05□□□□□ -0.96
Ccdc40-202ENSMUST00000053440 Cst11Q9D269 139 aa9.05□□□□□ -0.96
Ccdc40-202ENSMUST00000053440 Popdc3Q9ES81 291 aa9.05□□□□□ -0.96
Ccdc40-202ENSMUST00000053440 Cnot9Q9JKY0 299 aa9.05□□□□□ -0.96
Ccdc40-202ENSMUST00000053440 Tmem176bQ9R1Q6 263 aa9.05□□□□□ -0.96
Ccdc40-202ENSMUST00000053440 Prss47A0A0N4SVQ0 395 aa9.05□□□□□ -0.96
Ccdc40-202ENSMUST00000053440 Igkv15-103A0A140T8P3 115 aa9.05□□□□□ -0.96
Ccdc40-202ENSMUST00000053440 Olfr1107A2AVB8 312 aa9.05□□□□□ -0.96
Ccdc40-202ENSMUST00000053440 Olfr1095A3KPP7 308 aa9.05□□□□□ -0.96
Ccdc40-202ENSMUST00000053440 Fbxw28E9Q8A4 466 aa9.05□□□□□ -0.96
Ccdc40-202ENSMUST00000053440 Vmn2r99H3BK37 856 aa9.05□□□□□ -0.96
Ccdc40-202ENSMUST00000053440 Hsd3b6O35469 373 aa9.05□□□□□ -0.96
Ccdc40-202ENSMUST00000053440 NcanP55066 1268 aa9.05□□□□□ -0.96
Ccdc40-202ENSMUST00000053440 4930480E11RikQ0VG34 394 aa9.05□□□□□ -0.96
Ccdc40-202ENSMUST00000053440 ptchd1Q14B62 888 aa9.05□□□□□ -0.96
Ccdc40-202ENSMUST00000053440 Gm648Q3UJ22 213 aa9.05□□□□□ -0.96
Ccdc40-202ENSMUST00000053440 Sntb2Q61235 520 aa9.05□□□□□ -0.96
Ccdc40-202ENSMUST00000053440 Taf6Q62311 678 aaKnown RBP9.05□□□□□ -0.96
Ccdc40-202ENSMUST00000053440 RybpQ8CCI5 228 aa9.05□□□□□ -0.96
Ccdc40-202ENSMUST00000053440 Cmtm4Q8CJ61 208 aa9.05□□□□□ -0.96
Ccdc40-202ENSMUST00000053440 Eipr1Q8K0G5 386 aa9.05□□□□□ -0.96
Ccdc40-202ENSMUST00000053440 Ppp1r14cQ8R4S0 164 aa9.05□□□□□ -0.96
Ccdc40-202ENSMUST00000053440 Slc22a6Q8VC69 545 aa9.05□□□□□ -0.96
Ccdc40-202ENSMUST00000053440 Olfr672Q8VG28 312 aa9.05□□□□□ -0.96
Ccdc40-202ENSMUST00000053440 Mrgpra5Q91ZC7 304 aa9.05□□□□□ -0.96
Ccdc40-202ENSMUST00000053440 GpnmbQ99P91 574 aa9.05□□□□□ -0.96
Ccdc40-202ENSMUST00000053440 Wdr45bQ9CR39 344 aa9.05□□□□□ -0.96
Ccdc40-202ENSMUST00000053440 UqcrbQ9D855 111 aa9.05□□□□□ -0.96
Ccdc40-202ENSMUST00000053440 Gstz1Q9WVL0 216 aa9.05□□□□□ -0.96
Ccdc40-202ENSMUST00000053440 Map1bP14873 2464 aaKnown RBP9.04□□□□□ -0.96
Ccdc40-202ENSMUST00000053440 Olfr634-ps1A0A1B0GRN7 318 aa9.04□□□□□ -0.96
Ccdc40-202ENSMUST00000053440 Gm14862B1AV28 81 aa9.04□□□□□ -0.96
Ccdc40-202ENSMUST00000053440 Smpd5D6MZJ6 483 aa9.04□□□□□ -0.96
Ccdc40-202ENSMUST00000053440 Mfsd4b5E9PYY6 479 aa9.04□□□□□ -0.96
Ccdc40-202ENSMUST00000053440 Gm17067E9Q6S4 354 aa9.04□□□□□ -0.96
Ccdc40-202ENSMUST00000053440 H2-M11F6U8V3 335 aa9.04□□□□□ -0.96
Ccdc40-202ENSMUST00000053440 Vmn2r69G3XA45 850 aa9.04□□□□□ -0.96
Ccdc40-202ENSMUST00000053440 Cldn20G5E8X0 219 aa9.04□□□□□ -0.96
Ccdc40-202ENSMUST00000053440 Plscr5J3QM92 274 aa9.04□□□□□ -0.96
Ccdc40-202ENSMUST00000053440 Angpt1O08538 498 aa9.04□□□□□ -0.96
Ccdc40-202ENSMUST00000053440 Itgb7P26011 806 aa9.04□□□□□ -0.96
Ccdc40-202ENSMUST00000053440 Art5P70352 309 aa9.04□□□□□ -0.96
Ccdc40-202ENSMUST00000053440 Fgf13P70377 245 aa9.04□□□□□ -0.96
Ccdc40-202ENSMUST00000053440 Fgf11P70378 225 aa9.04□□□□□ -0.96
Ccdc40-202ENSMUST00000053440 Sox9Q04887 507 aa9.04□□□□□ -0.96
Ccdc40-202ENSMUST00000053440 Vmn1r11Q3SXA2 299 aa9.04□□□□□ -0.96
Ccdc40-202ENSMUST00000053440 Khdc4Q3TCX3 612 aa9.04□□□□□ -0.96
Ccdc40-202ENSMUST00000053440 Fam46cQ5SSF7 391 aa9.04□□□□□ -0.96
Ccdc40-202ENSMUST00000053440 Ttf1Q62187 859 aa9.04□□□□□ -0.96
Ccdc40-202ENSMUST00000053440 Crls1Q80ZM8 303 aa9.04□□□□□ -0.96
Ccdc40-202ENSMUST00000053440 Gm9758Q80ZT2 255 aa9.04□□□□□ -0.96
Ccdc40-202ENSMUST00000053440 TigarQ8BZA9 269 aa9.04□□□□□ -0.96
Ccdc40-202ENSMUST00000053440 4921517D22RikQ8CET0 269 aa9.04□□□□□ -0.96
Ccdc40-202ENSMUST00000053440 Zfp119bQ8K0G9 543 aa9.04□□□□□ -0.96
Ccdc40-202ENSMUST00000053440 RfesdQ8K2P6 157 aa9.04□□□□□ -0.96
Ccdc40-202ENSMUST00000053440 Olfr215Q8VF82 310 aa9.04□□□□□ -0.96
Ccdc40-202ENSMUST00000053440 Olfr120Q8VFQ2 330 aa9.04□□□□□ -0.96
Ccdc40-202ENSMUST00000053440 Taar1Q923Y8 332 aa9.04□□□□□ -0.96
Ccdc40-202ENSMUST00000053440 Msantd3Q9CR78 275 aa9.04□□□□□ -0.96
Ccdc40-202ENSMUST00000053440 Hcfc1r1Q9CYQ5 120 aa9.04□□□□□ -0.96
Ccdc40-202ENSMUST00000053440 Sertad3Q9ERC3 197 aa9.04□□□□□ -0.96
Ccdc40-202ENSMUST00000053440 Gm21854A0A087WNM4 232 aa9.04□□□□□ -0.96
Ccdc40-202ENSMUST00000053440 Zfp873A0A1B0GT64 667 aa9.04□□□□□ -0.96
Ccdc40-202ENSMUST00000053440 Tmed7D3YZZ5 224 aa9.04□□□□□ -0.96
Ccdc40-202ENSMUST00000053440 Gm20518E9Q548 580 aa9.04□□□□□ -0.96
Ccdc40-202ENSMUST00000053440 RabggtbP53612 339 aa9.04□□□□□ -0.96
Ccdc40-202ENSMUST00000053440 Zdhhc2P59267 366 aa9.04□□□□□ -0.96
Ccdc40-202ENSMUST00000053440 Fgf17P63075 216 aa9.04□□□□□ -0.96
Ccdc40-202ENSMUST00000053440 Greb1Q3UHK3 1954 aa9.04□□□□□ -0.96
Retrieved 100 of 22,080 RNA–protein pairs in 29.8 ms