RNA–Protein interactions for RNA: ENSMUST00000040182.12

Ccdc88a-201, Transcript of Girdin, mousemouse

APPRIS P1 TSL 5 BASIC

Gene Ccdc88a, Length 9,376 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc88a-201ENSMUST00000040182 Tcf7Q00417 419 aa15.59■□□□□ 0.09
Ccdc88a-201ENSMUST00000040182 Nmnat2Q8BNJ3 307 aa15.59■□□□□ 0.09
Ccdc88a-201ENSMUST00000040182 Olfr329-psM9MMK4 331 aa15.58■□□□□ 0.09
Ccdc88a-201ENSMUST00000040182 Gpr52P0C5J4 361 aa15.58■□□□□ 0.09
Ccdc88a-201ENSMUST00000040182 Poldip3Q8BG81 420 aaKnown RBP15.58■□□□□ 0.09
Ccdc88a-201ENSMUST00000040182 Olfr1466Q8VFW4 310 aa15.58■□□□□ 0.09
Ccdc88a-201ENSMUST00000040182 Olfr781Q8VFZ8 311 aa15.58■□□□□ 0.09
Ccdc88a-201ENSMUST00000040182 Olfr672Q8VG28 312 aa15.58■□□□□ 0.09
Ccdc88a-201ENSMUST00000040182 Tmem98Q91X86 226 aa15.58■□□□□ 0.09
Ccdc88a-201ENSMUST00000040182 Ndufaf4Q9D1H6 173 aa15.58■□□□□ 0.09
Ccdc88a-201ENSMUST00000040182 Vmn1r29Q9EQ41 303 aa15.58■□□□□ 0.09
Ccdc88a-201ENSMUST00000040182 Zfp383A0A087WRR7 490 aa15.58■□□□□ 0.09
Ccdc88a-201ENSMUST00000040182 Hist1h3bP84228 136 aa15.58■□□□□ 0.09
Ccdc88a-201ENSMUST00000040182 Cntn4Q69Z26 1026 aa15.58■□□□□ 0.09
Ccdc88a-201ENSMUST00000040182 Slc38a9Q8BGD6 560 aa15.58■□□□□ 0.09
Ccdc88a-201ENSMUST00000040182 Agbl3Q8CDP0 1006 aa15.58■□□□□ 0.09
Ccdc88a-201ENSMUST00000040182 RragcQ99K70 398 aa15.58■□□□□ 0.09
Ccdc88a-201ENSMUST00000040182 Gm1330D3Z460 184 aa15.58■□□□□ 0.08
Ccdc88a-201ENSMUST00000040182 BC049352E9Q2Z6 85 aa15.58■□□□□ 0.08
Ccdc88a-201ENSMUST00000040182 NfyaP23708 346 aa15.58■□□□□ 0.08
Ccdc88a-201ENSMUST00000040182 GcdhQ60759 438 aa15.58■□□□□ 0.08
Ccdc88a-201ENSMUST00000040182 Sema3bQ62177 748 aa15.58■□□□□ 0.08
Ccdc88a-201ENSMUST00000040182 Rnf222Q8CEF8 211 aa15.58■□□□□ 0.08
Ccdc88a-201ENSMUST00000040182 Q9D1Z2 194 aa15.58■□□□□ 0.08
Ccdc88a-201ENSMUST00000040182 Dock9Q8BIK4 2055 aa15.58■□□□□ 0.08
Ccdc88a-201ENSMUST00000040182 Dcaf7P61963 342 aaKnown RBP15.58■□□□□ 0.08
Ccdc88a-201ENSMUST00000040182 Zfp324Q78F42 583 aa15.58■□□□□ 0.08
Ccdc88a-201ENSMUST00000040182 Prdx6bQ8BG37 224 aa15.58■□□□□ 0.08
Ccdc88a-201ENSMUST00000040182 Scamp1Q8K021 338 aa15.58■□□□□ 0.08
Ccdc88a-201ENSMUST00000040182 Rbm39Q8VH51 530 aaKnown RBP15.58■□□□□ 0.08
Ccdc88a-201ENSMUST00000040182 Etfrf1Q91V16 86 aa15.58■□□□□ 0.08
Ccdc88a-201ENSMUST00000040182 Timm22Q9CQ85 194 aa15.58■□□□□ 0.08
Ccdc88a-201ENSMUST00000040182 Ceacam20Q9D2Z1 577 aa15.58■□□□□ 0.08
Ccdc88a-201ENSMUST00000040182 Kcnmb4Q9JIN6 210 aa15.58■□□□□ 0.08
Ccdc88a-201ENSMUST00000040182 Gm34653A0A1L1SR01 368 aa15.58■□□□□ 0.08
Ccdc88a-201ENSMUST00000040182 Galr1P56479 348 aa15.58■□□□□ 0.08
Ccdc88a-201ENSMUST00000040182 Fezf1Q0VDQ9 475 aa15.58■□□□□ 0.08
Ccdc88a-201ENSMUST00000040182 Lcn4Q62472 185 aa15.58■□□□□ 0.08
Ccdc88a-201ENSMUST00000040182 Ppp1r26Q6A025 1163 aa15.58■□□□□ 0.08
Ccdc88a-201ENSMUST00000040182 Kcnk12Q76M80 430 aa15.58■□□□□ 0.08
Ccdc88a-201ENSMUST00000040182 2210010C04RikQ9CPN9 247 aaKnown RBP15.58■□□□□ 0.08
Ccdc88a-201ENSMUST00000040182 Prss52Q9D9M0 321 aa15.58■□□□□ 0.08
Ccdc88a-201ENSMUST00000040182 Oasl2Q9Z2F2 508 aa15.58■□□□□ 0.08
Ccdc88a-201ENSMUST00000040182 Sh3yl1O08641 340 aa15.58■□□□□ 0.08
Ccdc88a-201ENSMUST00000040182 Bcl2P10417 236 aa15.58■□□□□ 0.08
Ccdc88a-201ENSMUST00000040182 Prelid2Q0VBB0 177 aa15.58■□□□□ 0.08
Ccdc88a-201ENSMUST00000040182 Gnb3Q61011 340 aa15.58■□□□□ 0.08
Ccdc88a-201ENSMUST00000040182 Fmr1nbQ80ZA7 238 aa15.58■□□□□ 0.08
Ccdc88a-201ENSMUST00000040182 Rrnad1Q8BZG5 475 aa15.58■□□□□ 0.08
Ccdc88a-201ENSMUST00000040182 Olfr849Q8VFF6 312 aa15.58■□□□□ 0.08
Ccdc88a-201ENSMUST00000040182 Ubqln4Q99NB8 596 aa15.58■□□□□ 0.08
Ccdc88a-201ENSMUST00000040182 Ube2kP61087 200 aa15.58■□□□□ 0.08
Ccdc88a-201ENSMUST00000040182 Tctex1d2Q9CQ66 144 aa15.58■□□□□ 0.08
Ccdc88a-201ENSMUST00000040182 Smim23Q9DAL0 136 aa15.58■□□□□ 0.08
Ccdc88a-201ENSMUST00000040182 Lman2Q9DBH5 358 aaKnown RBP15.58■□□□□ 0.08
Ccdc88a-201ENSMUST00000040182 Spock2Q9ER58 423 aa15.58■□□□□ 0.08
Ccdc88a-201ENSMUST00000040182 GifP52787 417 aa15.57■□□□□ 0.08
Ccdc88a-201ENSMUST00000040182 Lpar5Q149R9 372 aa15.57■□□□□ 0.08
Ccdc88a-201ENSMUST00000040182 Vmn1r210Q8R274 306 aa15.57■□□□□ 0.08
Ccdc88a-201ENSMUST00000040182 Pop7Q9DCH2 140 aa15.57■□□□□ 0.08
Ccdc88a-201ENSMUST00000040182 Olfr427E9Q7E7 315 aa15.57■□□□□ 0.08
Ccdc88a-201ENSMUST00000040182 Glt8d1Q6NSU3 371 aa15.57■□□□□ 0.08
Ccdc88a-201ENSMUST00000040182 Tmem62Q8BXJ9 643 aa15.57■□□□□ 0.08
Ccdc88a-201ENSMUST00000040182 Ca7Q9ERQ8 264 aa15.57■□□□□ 0.08
Ccdc88a-201ENSMUST00000040182 4930451I11RikE9Q9R3 111 aa15.57■□□□□ 0.08
Ccdc88a-201ENSMUST00000040182 Zfp457L7N1X4 647 aa15.57■□□□□ 0.08
Ccdc88a-201ENSMUST00000040182 Isl2Q9CXV0 359 aa15.57■□□□□ 0.08
Ccdc88a-201ENSMUST00000040182 B4galt6Q9WVK5 382 aa15.57■□□□□ 0.08
Ccdc88a-201ENSMUST00000040182 Col3a1P08121 1464 aa15.57■□□□□ 0.08
Ccdc88a-201ENSMUST00000040182 Bcl9Q9D219 1425 aa15.57■□□□□ 0.08
Ccdc88a-201ENSMUST00000040182 GzmdP11033 252 aa15.57■□□□□ 0.08
Ccdc88a-201ENSMUST00000040182 Q5XFZ0 217 aa15.57■□□□□ 0.08
Ccdc88a-201ENSMUST00000040182 Fam212bQ80VY2 300 aa15.57■□□□□ 0.08
Ccdc88a-201ENSMUST00000040182 Park7Q99LX0 189 aaKnown RBP15.57■□□□□ 0.08
Ccdc88a-201ENSMUST00000040182 Amdhd1Q9DBA8 426 aa15.57■□□□□ 0.08
Ccdc88a-201ENSMUST00000040182 Sbk2P0C5K1 362 aa15.57■□□□□ 0.08
Ccdc88a-201ENSMUST00000040182 LhcgrP30730 700 aa15.57■□□□□ 0.08
Ccdc88a-201ENSMUST00000040182 Bmp5P49003 452 aa15.57■□□□□ 0.08
Ccdc88a-201ENSMUST00000040182 P2rx3Q3UR32 397 aa15.57■□□□□ 0.08
Ccdc88a-201ENSMUST00000040182 Olfr1093Q8VF14 322 aa15.57■□□□□ 0.08
Ccdc88a-201ENSMUST00000040182 HadhbQ99JY0 475 aaKnown RBP15.57■□□□□ 0.08
Ccdc88a-201ENSMUST00000040182 Rnf141Q99MB7 230 aa15.57■□□□□ 0.08
Ccdc88a-201ENSMUST00000040182 Hint2Q9D0S9 163 aa15.57■□□□□ 0.08
Ccdc88a-201ENSMUST00000040182 Psg23Q9D2U0 471 aa15.57■□□□□ 0.08
Ccdc88a-201ENSMUST00000040182 Psg21Q9DAV5 471 aa15.57■□□□□ 0.08
Ccdc88a-201ENSMUST00000040182 Cylc1A0A1B0GR13 642 aa15.57■□□□□ 0.08
Ccdc88a-201ENSMUST00000040182 AcrP23578 436 aa15.57■□□□□ 0.08
Ccdc88a-201ENSMUST00000040182 Kiaa1456Q80WQ4 447 aa15.57■□□□□ 0.08
Ccdc88a-201ENSMUST00000040182 GalpQ810H5 117 aa15.57■□□□□ 0.08
Ccdc88a-201ENSMUST00000040182 Trim23Q8BGX0 574 aa15.57■□□□□ 0.08
Ccdc88a-201ENSMUST00000040182 Lmo3Q8BZL8 145 aa15.57■□□□□ 0.08
Ccdc88a-201ENSMUST00000040182 Creb5Q8K1L0 357 aa15.57■□□□□ 0.08
Ccdc88a-201ENSMUST00000040182 Vmn1r220Q8R272 298 aa15.57■□□□□ 0.08
Ccdc88a-201ENSMUST00000040182 ScelQ9EQG3 652 aa15.57■□□□□ 0.08
Ccdc88a-201ENSMUST00000040182 MyotQ9JIF9 496 aa15.57■□□□□ 0.08
Ccdc88a-201ENSMUST00000040182 Arap2Q8BZ05 1703 aa15.57■□□□□ 0.08
Ccdc88a-201ENSMUST00000040182 Eef1a2P62631 463 aaKnown RBP15.57■□□□□ 0.08
Ccdc88a-201ENSMUST00000040182 PrtgQ2EY15 1191 aa15.57■□□□□ 0.08
Ccdc88a-201ENSMUST00000040182 CrhbpQ60571 322 aa15.57■□□□□ 0.08
Ccdc88a-201ENSMUST00000040182 Slc22a22Q8R0S9 554 aa15.57■□□□□ 0.08
Retrieved 100 of 22,080 RNA–protein pairs in 35.4 ms