RNA–Protein interactions for RNA: ENST00000641847.1

PHGDH-228, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 692 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-228ENST00000641847 SLC7A13Q8TCU3 470 aa8.46□□□□□ -1.06
PHGDH-228ENST00000641847 TMEM255BQ8WV15 326 aa8.46□□□□□ -1.06
PHGDH-228ENST00000641847 TMEM239Q8WW34 195 aa8.46□□□□□ -1.06
PHGDH-228ENST00000641847 ACOT11Q8WXI4 607 aaPredicted RBP8.46□□□□□ -1.06
PHGDH-228ENST00000641847 MPP4Q96JB8 637 aa8.46□□□□□ -1.06
PHGDH-228ENST00000641847 C18orf12Q96KH6 178 aa8.46□□□□□ -1.06
PHGDH-228ENST00000641847 CIB1Q99828 191 aa8.46□□□□□ -1.06
PHGDH-228ENST00000641847 FUZQ9BT04 418 aa8.46□□□□□ -1.06
PHGDH-228ENST00000641847 GABARAPL1Q9H0R8 117 aa8.46□□□□□ -1.06
PHGDH-228ENST00000641847 OSGIN1Q9UJX0 560 aa8.46□□□□□ -1.06
PHGDH-228ENST00000641847 PRDM4Q9UKN5 801 aa8.46□□□□□ -1.06
PHGDH-228ENST00000641847 TMED7Q9Y3B3 224 aa8.46□□□□□ -1.06
PHGDH-228ENST00000641847 MAGED1Q9Y5V3 778 aaPredicted RBP8.46□□□□□ -1.06
PHGDH-228ENST00000641847 IGKV1D-42A0A075B6H8 117 aa8.45□□□□□ -1.06
PHGDH-228ENST00000641847 A0A087WUU8 490 aa8.45□□□□□ -1.06
PHGDH-228ENST00000641847 TMEM72A0PK05 275 aa8.45□□□□□ -1.06
PHGDH-228ENST00000641847 OR2M5A3KFT3 312 aa8.45□□□□□ -1.06
PHGDH-228ENST00000641847 NPIPA5E9PKD4 350 aa8.45□□□□□ -1.06
PHGDH-228ENST00000641847 G3V2T6 193 aa8.45□□□□□ -1.06
PHGDH-228ENST00000641847 PDLIM1O00151 329 aa8.45□□□□□ -1.06
PHGDH-228ENST00000641847 TFECO14948 347 aaPredicted RBP8.45□□□□□ -1.06
PHGDH-228ENST00000641847 CASQ2O14958 399 aaPredicted RBP8.45□□□□□ -1.06
PHGDH-228ENST00000641847 PIP5K1CO60331 668 aa8.45□□□□□ -1.06
PHGDH-228ENST00000641847 OR10H3O60404 316 aa8.45□□□□□ -1.06
PHGDH-228ENST00000641847 ZIC3O60481 467 aa8.45□□□□□ -1.06
PHGDH-228ENST00000641847 HPNP05981 417 aa8.45□□□□□ -1.06
PHGDH-228ENST00000641847 CELA3AP09093 270 aa8.45□□□□□ -1.06
PHGDH-228ENST00000641847 ZNF24P17028 368 aa8.45□□□□□ -1.06
PHGDH-228ENST00000641847 IGFBP2P18065 325 aa8.45□□□□□ -1.06
PHGDH-228ENST00000641847 IL11P20809 199 aa8.45□□□□□ -1.06
PHGDH-228ENST00000641847 ELK4P28324 431 aa8.45□□□□□ -1.06
PHGDH-228ENST00000641847 ADH6P28332 368 aa8.45□□□□□ -1.06
PHGDH-228ENST00000641847 CHRNB4P30926 498 aa8.45□□□□□ -1.06
PHGDH-228ENST00000641847 APOBEC1P41238 236 aaKnown RBP8.45□□□□□ -1.06
PHGDH-228ENST00000641847 ARHGDIAP52565 204 aa8.45□□□□□ -1.06
PHGDH-228ENST00000641847 HMGA2P52926 109 aa8.45□□□□□ -1.06
PHGDH-228ENST00000641847 B3GALT5-AS1P59052 145 aa8.45□□□□□ -1.06
PHGDH-228ENST00000641847 ADAM8P78325 824 aa8.45□□□□□ -1.06
PHGDH-228ENST00000641847 LSM11P83369 360 aaKnown RBP eCLIP8.45□□□□□ -1.06
PHGDH-228ENST00000641847 SELENBP1Q13228 472 aa8.45□□□□□ -1.06
PHGDH-228ENST00000641847 SNCBQ16143 134 aa8.45□□□□□ -1.06
PHGDH-228ENST00000641847 TMEM44Q2T9K0 475 aa8.45□□□□□ -1.06
PHGDH-228ENST00000641847 WIPI1Q5MNZ9 446 aaPredicted RBP8.45□□□□□ -1.06
PHGDH-228ENST00000641847 OGFRL1Q5TC84 451 aaPredicted RBP8.45□□□□□ -1.06
PHGDH-228ENST00000641847 C3orf33Q6P1S2 294 aa8.45□□□□□ -1.06
PHGDH-228ENST00000641847 TTC33Q6PID6 262 aaPredicted RBP8.45□□□□□ -1.06
PHGDH-228ENST00000641847 TBPL2Q6SJ96 375 aa8.45□□□□□ -1.06
PHGDH-228ENST00000641847 MBOAT2Q6ZWT7 520 aa8.45□□□□□ -1.06
PHGDH-228ENST00000641847 STK32CQ86UX6 486 aa8.45□□□□□ -1.06
PHGDH-228ENST00000641847 ADGRG3Q86Y34 549 aa8.45□□□□□ -1.06
PHGDH-228ENST00000641847 P3H2Q8IVL5 708 aa8.45□□□□□ -1.06
PHGDH-228ENST00000641847 NRMQ8IXM6 262 aa8.45□□□□□ -1.06
PHGDH-228ENST00000641847 PFN4Q8NHR9 129 aa8.45□□□□□ -1.06
PHGDH-228ENST00000641847 PIGXQ8TBF5 258 aa8.45□□□□□ -1.06
PHGDH-228ENST00000641847 GIPC3Q8TF64 312 aa8.45□□□□□ -1.06
PHGDH-228ENST00000641847 NRGNQ92686 78 aa8.45□□□□□ -1.06
PHGDH-228ENST00000641847 EME1Q96AY2 570 aa8.45□□□□□ -1.06
PHGDH-228ENST00000641847 NRBF2Q96F24 287 aa8.45□□□□□ -1.06
PHGDH-228ENST00000641847 HS6ST2Q96MM7 605 aa8.45□□□□□ -1.06
PHGDH-228ENST00000641847 SFXN2Q96NB2 322 aa8.45□□□□□ -1.06
PHGDH-228ENST00000641847 PIGQQ9BRB3 760 aa8.45□□□□□ -1.06
PHGDH-228ENST00000641847 C9orf16Q9BUW7 83 aa8.45□□□□□ -1.06
PHGDH-228ENST00000641847 ZNF426Q9BUY5 554 aa8.45□□□□□ -1.06
PHGDH-228ENST00000641847 POLDIP3Q9BY77 421 aaKnown RBP8.45□□□□□ -1.06
PHGDH-228ENST00000641847 TMEM185BQ9H7F4 350 aa8.45□□□□□ -1.06
PHGDH-228ENST00000641847 KRCC1Q9NPI7 259 aaPredicted RBP8.45□□□□□ -1.06
PHGDH-228ENST00000641847 PDP1Q9P0J1 537 aaPredicted RBP8.45□□□□□ -1.06
PHGDH-228ENST00000641847 KIF17Q9P2E2 1029 aa8.45□□□□□ -1.06
PHGDH-228ENST00000641847 STOML1Q9UBI4 398 aa8.45□□□□□ -1.06
PHGDH-228ENST00000641847 CHRNA9Q9UGM1 479 aa8.45□□□□□ -1.06
PHGDH-228ENST00000641847 NPIPA1Q9UND3 350 aa8.45□□□□□ -1.06
PHGDH-228ENST00000641847 SPIN1Q9Y657 262 aaPredicted RBP8.45□□□□□ -1.06
PHGDH-228ENST00000641847 AKAP6Q13023 2319 aa8.45□□□□□ -1.06
PHGDH-228ENST00000641847 MXRA5Q9NR99 2828 aa8.44□□□□□ -1.06
PHGDH-228ENST00000641847 PCNX3Q9H6A9 2034 aa8.44□□□□□ -1.06
PHGDH-228ENST00000641847 NCOA6Q14686 2063 aaPredicted RBP8.44□□□□□ -1.06
PHGDH-228ENST00000641847 ARRDC5A6NEK1 342 aa8.44□□□□□ -1.06
PHGDH-228ENST00000641847 H3BML4 177 aa8.44□□□□□ -1.06
PHGDH-228ENST00000641847 SOCS2O14508 198 aa8.44□□□□□ -1.06
PHGDH-228ENST00000641847 EI24O14681 340 aa8.44□□□□□ -1.06
PHGDH-228ENST00000641847 ZNF208O43345 1280 aa8.44□□□□□ -1.06
PHGDH-228ENST00000641847 HEXAP06865 529 aa8.44□□□□□ -1.06
PHGDH-228ENST00000641847 HOXD4P09016 255 aaPredicted RBP8.44□□□□□ -1.06
PHGDH-228ENST00000641847 INHBBP09529 407 aa8.44□□□□□ -1.06
PHGDH-228ENST00000641847 PEPDP12955 493 aa8.44□□□□□ -1.06
PHGDH-228ENST00000641847 IFI30P13284 250 aa8.44□□□□□ -1.06
PHGDH-228ENST00000641847 IFNGR2P38484 337 aa8.44□□□□□ -1.06
PHGDH-228ENST00000641847 GPR4P46093 362 aa8.44□□□□□ -1.06
PHGDH-228ENST00000641847 CRYZQ08257 329 aaKnown RBP8.44□□□□□ -1.06
PHGDH-228ENST00000641847 LRRC36Q1X8D7 754 aa8.44□□□□□ -1.06
PHGDH-228ENST00000641847 GLYR1Q49A26 553 aaPredicted RBP8.44□□□□□ -1.06
PHGDH-228ENST00000641847 RNFT1Q5M7Z0 435 aa8.44□□□□□ -1.06
PHGDH-228ENST00000641847 OTUD3Q5T2D3 398 aaPredicted RBP8.44□□□□□ -1.06
PHGDH-228ENST00000641847 PGBD2Q6P3X8 592 aa8.44□□□□□ -1.06
PHGDH-228ENST00000641847 LINC00114Q6XXX2 140 aa8.44□□□□□ -1.06
PHGDH-228ENST00000641847 RRM2BQ7LG56 351 aa8.44□□□□□ -1.06
PHGDH-228ENST00000641847 MEX3DQ86XN8 651 aaKnown RBP8.44□□□□□ -1.06
PHGDH-228ENST00000641847 DOLPP1Q86YN1 238 aa8.44□□□□□ -1.06
PHGDH-228ENST00000641847 CBR4Q8N4T8 237 aa8.44□□□□□ -1.06
PHGDH-228ENST00000641847 LINC00471Q8N535 108 aa8.44□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms