RNA–Protein interactions for RNA: ENST00000641720.1

PHGDH-225, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 548 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-225ENST00000641720 ZNF440Q8IYI8 595 aa6.6□□□□□ -1.35
PHGDH-225ENST00000641720 CADM2Q8N3J6 435 aa6.6□□□□□ -1.35
PHGDH-225ENST00000641720 MAPK1IP1LQ8NDC0 245 aa6.6□□□□□ -1.35
PHGDH-225ENST00000641720 OR6T1Q8NGN1 323 aa6.6□□□□□ -1.35
PHGDH-225ENST00000641720 ZNF563Q8TA94 476 aa6.6□□□□□ -1.35
PHGDH-225ENST00000641720 SLC26A7Q8TE54 656 aa6.6□□□□□ -1.35
PHGDH-225ENST00000641720 ST8SIA1Q92185 356 aa6.6□□□□□ -1.35
PHGDH-225ENST00000641720 SLC35B4Q969S0 331 aa6.6□□□□□ -1.35
PHGDH-225ENST00000641720 FAM162AQ96A26 154 aa6.6□□□□□ -1.35
PHGDH-225ENST00000641720 TPD52L3Q96J77 140 aa6.6□□□□□ -1.35
PHGDH-225ENST00000641720 MRGPRX4Q96LA9 322 aa6.6□□□□□ -1.35
PHGDH-225ENST00000641720 WFIKKN1Q96NZ8 548 aa6.6□□□□□ -1.35
PHGDH-225ENST00000641720 BTBD10Q9BSF8 475 aa6.6□□□□□ -1.35
PHGDH-225ENST00000641720 THTPAQ9BU02 230 aa6.6□□□□□ -1.35
PHGDH-225ENST00000641720 RBM24Q9BX46 236 aaKnown RBP6.6□□□□□ -1.35
PHGDH-225ENST00000641720 CALHM2Q9HA72 323 aa6.6□□□□□ -1.35
PHGDH-225ENST00000641720 CTPS2Q9NRF8 586 aa6.6□□□□□ -1.35
PHGDH-225ENST00000641720 ACER3Q9NUN7 267 aa6.6□□□□□ -1.35
PHGDH-225ENST00000641720 TESQ9UGI8 421 aaKnown RBP6.6□□□□□ -1.35
PHGDH-225ENST00000641720 ZNF232Q9UNY5 417 aa6.6□□□□□ -1.35
PHGDH-225ENST00000641720 MRPS18CQ9Y3D5 142 aaKnown RBP6.6□□□□□ -1.35
PHGDH-225ENST00000641720 ZNF337Q9Y3M9 751 aa6.6□□□□□ -1.35
PHGDH-225ENST00000641720 VWFP04275 2813 aa6.59□□□□□ -1.35
PHGDH-225ENST00000641720 A0A1B0GWA3 101 aa6.59□□□□□ -1.35
PHGDH-225ENST00000641720 ZC3H12DA2A288 527 aaKnown RBP6.59□□□□□ -1.35
PHGDH-225ENST00000641720 OVOL3O00110 214 aa6.59□□□□□ -1.35
PHGDH-225ENST00000641720 ACOT8O14734 319 aa6.59□□□□□ -1.35
PHGDH-225ENST00000641720 DNAJC8O75937 253 aaPredicted RBP6.59□□□□□ -1.35
PHGDH-225ENST00000641720 RCBTB2O95199 551 aa6.59□□□□□ -1.35
PHGDH-225ENST00000641720 LYPD3O95274 346 aa6.59□□□□□ -1.35
PHGDH-225ENST00000641720 ACTL6AO96019 429 aa6.59□□□□□ -1.35
PHGDH-225ENST00000641720 THY1P04216 161 aa6.59□□□□□ -1.35
PHGDH-225ENST00000641720 THBDP07204 575 aa6.59□□□□□ -1.35
PHGDH-225ENST00000641720 TMIGD3P0DMS9 266 aaPredicted RBP6.59□□□□□ -1.35
PHGDH-225ENST00000641720 CCNA2P20248 432 aa6.59□□□□□ -1.35
PHGDH-225ENST00000641720 PTNP21246 168 aa6.59□□□□□ -1.35
PHGDH-225ENST00000641720 FUT4P22083 530 aa6.59□□□□□ -1.35
PHGDH-225ENST00000641720 ME2P23368 584 aa6.59□□□□□ -1.35
PHGDH-225ENST00000641720 CHMP24386 653 aa6.59□□□□□ -1.35
PHGDH-225ENST00000641720 ELK4P28324 431 aa6.59□□□□□ -1.35
PHGDH-225ENST00000641720 TACR3P29371 465 aa6.59□□□□□ -1.35
PHGDH-225ENST00000641720 SFTPDP35247 375 aa6.59□□□□□ -1.35
PHGDH-225ENST00000641720 EIF1P41567 113 aaKnown RBP6.59□□□□□ -1.35
PHGDH-225ENST00000641720 SLC1A3P43003 542 aa6.59□□□□□ -1.35
PHGDH-225ENST00000641720 SUCLG1P53597 346 aaKnown RBP6.59□□□□□ -1.35
PHGDH-225ENST00000641720 MS4A2Q01362 244 aa6.59□□□□□ -1.35
PHGDH-225ENST00000641720 SRYQ05066 204 aa6.59□□□□□ -1.35
PHGDH-225ENST00000641720 GABPB1Q06547 395 aaPredicted RBP6.59□□□□□ -1.35
PHGDH-225ENST00000641720 FAM27E3Q08E93 113 aa6.59□□□□□ -1.35
PHGDH-225ENST00000641720 MERTKQ12866 999 aa6.59□□□□□ -1.35
PHGDH-225ENST00000641720 GUSBP1Q15486 140 aa6.59□□□□□ -1.35
PHGDH-225ENST00000641720 CTU2Q2VPK5 515 aaKnown RBP6.59□□□□□ -1.35
PHGDH-225ENST00000641720 SPATS1Q496A3 300 aa6.59□□□□□ -1.35
PHGDH-225ENST00000641720 GLYATQ6IB77 296 aa6.59□□□□□ -1.35
PHGDH-225ENST00000641720 PODNL1Q6PEZ8 512 aa6.59□□□□□ -1.35
PHGDH-225ENST00000641720 ZNF474Q6S9Z5 364 aaPredicted RBP6.59□□□□□ -1.35
PHGDH-225ENST00000641720 CYP2R1Q6VVX0 501 aa6.59□□□□□ -1.35
PHGDH-225ENST00000641720 WDR88Q6ZMY6 472 aa6.59□□□□□ -1.35
PHGDH-225ENST00000641720 DEF8Q6ZN54 512 aa6.59□□□□□ -1.35
PHGDH-225ENST00000641720 C20orf204Q6ZNR8 217 aa6.59□□□□□ -1.35
PHGDH-225ENST00000641720 CCDC121Q6ZUS5 278 aa6.59□□□□□ -1.35
PHGDH-225ENST00000641720 CBLL1Q75N03 491 aa6.59□□□□□ -1.35
PHGDH-225ENST00000641720 ASRGL1Q7L266 308 aa6.59□□□□□ -1.35
PHGDH-225ENST00000641720 GRINAQ7Z429 371 aa6.59□□□□□ -1.35
PHGDH-225ENST00000641720 TSEN54Q7Z6J9 526 aaKnown RBP6.59□□□□□ -1.35
PHGDH-225ENST00000641720 UBQLNLQ8IYU4 475 aa6.59□□□□□ -1.35
PHGDH-225ENST00000641720 ARHGAP24Q8N264 748 aa6.59□□□□□ -1.35
PHGDH-225ENST00000641720 ATP6V1C2Q8NEY4 427 aa6.59□□□□□ -1.35
PHGDH-225ENST00000641720 OR52E4Q8NGH9 312 aa6.59□□□□□ -1.35
PHGDH-225ENST00000641720 ZPLD1Q8TCW7 415 aa6.59□□□□□ -1.35
PHGDH-225ENST00000641720 TMEM158Q8WZ71 300 aa6.59□□□□□ -1.35
PHGDH-225ENST00000641720 PROX1Q92786 737 aa6.59□□□□□ -1.35
PHGDH-225ENST00000641720 ABTB1Q969K4 478 aaPredicted RBP6.59□□□□□ -1.35
PHGDH-225ENST00000641720 UTP4Q969X6 686 aaKnown RBP6.59□□□□□ -1.35
PHGDH-225ENST00000641720 C3orf49Q96BT1 292 aa6.59□□□□□ -1.35
PHGDH-225ENST00000641720 NSMCE2Q96MF7 247 aa6.59□□□□□ -1.35
PHGDH-225ENST00000641720 CCL19Q99731 98 aa6.59□□□□□ -1.35
PHGDH-225ENST00000641720 TUBA1CQ9BQE3 449 aa6.59□□□□□ -1.35
PHGDH-225ENST00000641720 TMEM204Q9BSN7 226 aa6.59□□□□□ -1.35
PHGDH-225ENST00000641720 SFXN3Q9BWM7 321 aa6.59□□□□□ -1.35
PHGDH-225ENST00000641720 OR11A1Q9GZK7 315 aa6.59□□□□□ -1.35
PHGDH-225ENST00000641720 ARMC7Q9H6L4 198 aa6.59□□□□□ -1.35
PHGDH-225ENST00000641720 COQ10BQ9H8M1 238 aa6.59□□□□□ -1.35
PHGDH-225ENST00000641720 GORASP2Q9H8Y8 452 aa6.59□□□□□ -1.35
PHGDH-225ENST00000641720 DCAF13Q9NV06 445 aaKnown RBP6.59□□□□□ -1.35
PHGDH-225ENST00000641720 ADPRHL2Q9NX46 363 aa6.59□□□□□ -1.35
PHGDH-225ENST00000641720 KLHL28Q9NXS3 571 aa6.59□□□□□ -1.35
PHGDH-225ENST00000641720 SLC7A8Q9UHI5 535 aa6.59□□□□□ -1.35
PHGDH-225ENST00000641720 OSGIN1Q9UJX0 560 aa6.59□□□□□ -1.35
PHGDH-225ENST00000641720 SLC13A4Q9UKG4 626 aa6.59□□□□□ -1.35
PHGDH-225ENST00000641720 BAG5Q9UL15 447 aa6.59□□□□□ -1.35
PHGDH-225ENST00000641720 CAMK2AQ9UQM7 478 aa6.59□□□□□ -1.35
PHGDH-225ENST00000641720 SH3GLB1Q9Y371 365 aa6.59□□□□□ -1.35
PHGDH-225ENST00000641720 IGKV1D-42A0A075B6H8 117 aa6.58□□□□□ -1.36
PHGDH-225ENST00000641720 TMED7-TICAM2A0A0A6YYA0 188 aa6.58□□□□□ -1.36
PHGDH-225ENST00000641720 A0A0B4J2E0 115 aa6.58□□□□□ -1.36
PHGDH-225ENST00000641720 A0A0J9YW62 118 aa6.58□□□□□ -1.36
PHGDH-225ENST00000641720 A0A1B0GX12 115 aa6.58□□□□□ -1.36
PHGDH-225ENST00000641720 TCRBV5S2A0A599 114 aa6.58□□□□□ -1.36
PHGDH-225ENST00000641720 TMEM72A0PK05 275 aa6.58□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms