RNA–Protein interactions for RNA: ENST00000639809.1

SPIN3-229, Transcript of spindlin family member 3, human

TSL 5

Gene SPIN3, Length 1,118 nt, Biotype nonsense mediated decay.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SPIN3-229	ENST00000639809	OR9K2	Q8NGE7	335 aa		13.8	□□□□□ -0.2
SPIN3-229	ENST00000639809	CNOT9	Q92600	299 aa	Known RBP	13.8	□□□□□ -0.2
SPIN3-229	ENST00000639809	CCDC115	Q96NT0	180 aa		13.8	□□□□□ -0.2
SPIN3-229	ENST00000639809	ADAM19	Q9H013	955 aa		13.8	□□□□□ -0.2
SPIN3-229	ENST00000639809	SLC38A1	Q9H2H9	487 aa		13.8	□□□□□ -0.2
SPIN3-229	ENST00000639809	TMEM45A	Q9NWC5	275 aa		13.8	□□□□□ -0.2
SPIN3-229	ENST00000639809	MOK	Q9UQ07	419 aa		13.8	□□□□□ -0.2
SPIN3-229	ENST00000639809	AQP7P3	A6NL99	342 aa		13.79	□□□□□ -0.2
SPIN3-229	ENST00000639809	CLDN24	A6NM45	220 aa		13.79	□□□□□ -0.2
SPIN3-229	ENST00000639809		B9A039	149 aa		13.79	□□□□□ -0.2
SPIN3-229	ENST00000639809		E9PBE3	544 aa		13.79	□□□□□ -0.2
SPIN3-229	ENST00000639809	ATP6V1G2-DDX39B	F2Z307	99 aa		13.79	□□□□□ -0.2
SPIN3-229	ENST00000639809	TYROBP	O43914	113 aa		13.79	□□□□□ -0.2
SPIN3-229	ENST00000639809	DBI	P07108	87 aa	Known RBP	13.79	□□□□□ -0.2
SPIN3-229	ENST00000639809	HOXB1	P14653	301 aa	Predicted RBP	13.79	□□□□□ -0.2
SPIN3-229	ENST00000639809	IL7R	P16871	459 aa		13.79	□□□□□ -0.2
SPIN3-229	ENST00000639809	CCNA2	P20248	432 aa		13.79	□□□□□ -0.2
SPIN3-229	ENST00000639809	RPS4Y1	P22090	263 aa	Known RBP	13.79	□□□□□ -0.2
SPIN3-229	ENST00000639809	S100A3	P33764	101 aa		13.79	□□□□□ -0.2
SPIN3-229	ENST00000639809	SERPINF1	P36955	418 aa		13.79	□□□□□ -0.2
SPIN3-229	ENST00000639809	SLC25A3	Q00325	362 aa		13.79	□□□□□ -0.2
SPIN3-229	ENST00000639809	EPS8	Q12929	822 aa		13.79	□□□□□ -0.2
SPIN3-229	ENST00000639809	SQLE	Q14534	574 aa		13.79	□□□□□ -0.2
SPIN3-229	ENST00000639809	ZSWIM7	Q19AV6	140 aa		13.79	□□□□□ -0.2
SPIN3-229	ENST00000639809	C9orf135	Q5VTT2	229 aa		13.79	□□□□□ -0.2
SPIN3-229	ENST00000639809	FAM169B	Q8N8A8	192 aa		13.79	□□□□□ -0.2
SPIN3-229	ENST00000639809	MAGEE2	Q8TD90	523 aa	Predicted RBP	13.79	□□□□□ -0.2
SPIN3-229	ENST00000639809	WDR60	Q8WVS4	1066 aa		13.79	□□□□□ -0.2
SPIN3-229	ENST00000639809	FBXO17	Q96EF6	278 aa		13.79	□□□□□ -0.2
SPIN3-229	ENST00000639809	SLC38A2	Q96QD8	506 aa		13.79	□□□□□ -0.2
SPIN3-229	ENST00000639809	RAP2C	Q9Y3L5	183 aa		13.79	□□□□□ -0.2
SPIN3-229	ENST00000639809	ARPC4-TTLL3	A0A0A6YYG9	625 aa		13.78	□□□□□ -0.2
SPIN3-229	ENST00000639809	LOC100289279	A0A1B0GTE1	492 aa		13.78	□□□□□ -0.2
SPIN3-229	ENST00000639809	PRAMEF27	A3QJZ7	478 aa		13.78	□□□□□ -0.2
SPIN3-229	ENST00000639809	LIPT2	A6NK58	231 aa		13.78	□□□□□ -0.2
SPIN3-229	ENST00000639809	AP3D1	O14617	1153 aa		13.78	□□□□□ -0.2
SPIN3-229	ENST00000639809	BIRC5	O15392	142 aa		13.78	□□□□□ -0.2
SPIN3-229	ENST00000639809	KRT33A	O76009	404 aa		13.78	□□□□□ -0.2
SPIN3-229	ENST00000639809	CRYAA	P02489	173 aa		13.78	□□□□□ -0.2
SPIN3-229	ENST00000639809	APEH	P13798	732 aa	Known RBP	13.78	□□□□□ -0.2
SPIN3-229	ENST00000639809	LBP	P18428	481 aa		13.78	□□□□□ -0.2
SPIN3-229	ENST00000639809	IGFBP5	P24593	272 aa		13.78	□□□□□ -0.2
SPIN3-229	ENST00000639809	CXCR1	P25024	350 aa		13.78	□□□□□ -0.2
SPIN3-229	ENST00000639809	RPL14	P50914	215 aa	Known RBP	13.78	□□□□□ -0.2
SPIN3-229	ENST00000639809	ABCE1	P61221	599 aa	Known RBP	13.78	□□□□□ -0.2
SPIN3-229	ENST00000639809	GGTLC2	Q14390	218 aa		13.78	□□□□□ -0.2
SPIN3-229	ENST00000639809	EFNB3	Q15768	340 aa		13.78	□□□□□ -0.2
SPIN3-229	ENST00000639809	SPANXN4	Q5MJ08	99 aa		13.78	□□□□□ -0.2
SPIN3-229	ENST00000639809	PEX5L	Q8IYB4	626 aa		13.78	□□□□□ -0.2
SPIN3-229	ENST00000639809	ZIC4	Q8N9L1	334 aa		13.78	□□□□□ -0.2
SPIN3-229	ENST00000639809	OR4F15	Q8NGB8	312 aa		13.78	□□□□□ -0.2
SPIN3-229	ENST00000639809	DNAJA3	Q96EY1	480 aa		13.78	□□□□□ -0.2
SPIN3-229	ENST00000639809	SORCS2	Q96PQ0	1159 aa		13.78	□□□□□ -0.2
SPIN3-229	ENST00000639809	TAPBPL	Q9BX59	468 aa		13.78	□□□□□ -0.2
SPIN3-229	ENST00000639809	CA10	Q9NS85	328 aa		13.78	□□□□□ -0.2
SPIN3-229	ENST00000639809	CRNN	Q9UBG3	495 aa	Predicted RBP	13.78	□□□□□ -0.2
SPIN3-229	ENST00000639809	ARFGEF3	Q5TH69	2177 aa		13.78	□□□□□ -0.2
SPIN3-229	ENST00000639809		A0A096LPI6	279 aa		13.77	□□□□□ -0.21
SPIN3-229	ENST00000639809	VSTM5	A8MXK1	200 aa		13.77	□□□□□ -0.21
SPIN3-229	ENST00000639809	ZNF587B	E7ETH6	402 aa		13.77	□□□□□ -0.21
SPIN3-229	ENST00000639809	C8B	P07358	591 aa		13.77	□□□□□ -0.21
SPIN3-229	ENST00000639809	ERCC1	P07992	297 aa	Predicted RBP	13.77	□□□□□ -0.21
SPIN3-229	ENST00000639809	CHRM4	P08173	479 aa		13.77	□□□□□ -0.21
SPIN3-229	ENST00000639809	PPOX	P50336	477 aa		13.77	□□□□□ -0.21
SPIN3-229	ENST00000639809	SH3BGR	P55822	239 aa	Predicted RBP	13.77	□□□□□ -0.21
SPIN3-229	ENST00000639809	UBE2N	P61088	152 aa	Known RBP	13.77	□□□□□ -0.21
SPIN3-229	ENST00000639809	CEACAM7	Q14002	265 aa		13.77	□□□□□ -0.21
SPIN3-229	ENST00000639809	SYPL1	Q16563	259 aa		13.77	□□□□□ -0.21
SPIN3-229	ENST00000639809	FAM174B	Q3ZCQ3	159 aa		13.77	□□□□□ -0.21
SPIN3-229	ENST00000639809	FAM120AOS	Q5T036	256 aa		13.77	□□□□□ -0.21
SPIN3-229	ENST00000639809	MRPL2	Q5T653	305 aa	Known RBP	13.77	□□□□□ -0.21
SPIN3-229	ENST00000639809	LIPN	Q5VXI9	398 aa		13.77	□□□□□ -0.21
SPIN3-229	ENST00000639809	TMEM225	Q6GV28	225 aa		13.77	□□□□□ -0.21
SPIN3-229	ENST00000639809	OGFOD2	Q6N063	350 aa		13.77	□□□□□ -0.21
SPIN3-229	ENST00000639809	PRPF8	Q6P2Q9	2335 aa	Known RBP eCLIP	13.77	□□□□□ -0.21
SPIN3-229	ENST00000639809	SLC46A3	Q7Z3Q1	461 aa		13.77	□□□□□ -0.21
SPIN3-229	ENST00000639809	RNF130	Q86XS8	419 aa		13.77	□□□□□ -0.21
SPIN3-229	ENST00000639809	TMEM99	Q8N816	258 aa		13.77	□□□□□ -0.21
SPIN3-229	ENST00000639809	ZNF781	Q8N8C0	355 aa		13.77	□□□□□ -0.21
SPIN3-229	ENST00000639809	ANKFN1	Q8N957	763 aa		13.77	□□□□□ -0.21
SPIN3-229	ENST00000639809	ANKK1	Q8NFD2	765 aa		13.77	□□□□□ -0.21
SPIN3-229	ENST00000639809	MSI2	Q96DH6	328 aa	Known RBP	13.77	□□□□□ -0.21
SPIN3-229	ENST00000639809	PANX1	Q96RD7	426 aa		13.77	□□□□□ -0.21
SPIN3-229	ENST00000639809	C19orf24	Q9BVV8	132 aa		13.77	□□□□□ -0.21
SPIN3-229	ENST00000639809	PRR14	Q9BWN1	585 aa		13.77	□□□□□ -0.21
SPIN3-229	ENST00000639809	CALML5	Q9NZT1	146 aa		13.77	□□□□□ -0.21
SPIN3-229	ENST00000639809	HAO1	Q9UJM8	370 aa		13.77	□□□□□ -0.21
SPIN3-229	ENST00000639809	RASD1	Q9Y272	281 aa		13.77	□□□□□ -0.21
SPIN3-229	ENST00000639809	IGHV1-18	A0A0C4DH31	117 aa		13.76	□□□□□ -0.21
SPIN3-229	ENST00000639809	TMEM120B	A0PK00	339 aa		13.76	□□□□□ -0.21
SPIN3-229	ENST00000639809	ZC3H12D	A2A288	527 aa	Known RBP	13.76	□□□□□ -0.21
SPIN3-229	ENST00000639809	CCDC154	A6NI56	674 aa		13.76	□□□□□ -0.21
SPIN3-229	ENST00000639809		A8MVM7	634 aa		13.76	□□□□□ -0.21
SPIN3-229	ENST00000639809	TM9SF1	O15321	606 aa		13.76	□□□□□ -0.21
SPIN3-229	ENST00000639809	ITM2A	O43736	263 aa		13.76	□□□□□ -0.21
SPIN3-229	ENST00000639809	AKR7A3	O95154	331 aa		13.76	□□□□□ -0.21
SPIN3-229	ENST00000639809	KRT75	O95678	551 aa		13.76	□□□□□ -0.21
SPIN3-229	ENST00000639809	NR2F1	P10589	423 aa		13.76	□□□□□ -0.21
SPIN3-229	ENST00000639809	ZNF23	P17027	643 aa		13.76	□□□□□ -0.21
SPIN3-229	ENST00000639809	COPZ1	P61923	177 aa		13.76	□□□□□ -0.21

Retrieved 100 of 20,778 RNA–protein pairs in 28 ms