RNA–Protein interactions for RNA: ENST00000639568.1

PTP4A1-207, Transcript of protein tyrosine phosphatase type IVA, member 1, humanhuman

TSL 5

Gene PTP4A1, Length 532 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1-207ENST00000639568 ZFP28Q8NHY6 868 aa9.36□□□□□ -0.91
PTP4A1-207ENST00000639568 TRIM44Q96DX7 344 aaPredicted RBP9.36□□□□□ -0.91
PTP4A1-207ENST00000639568 KTI12Q96EK9 354 aaPredicted RBP9.36□□□□□ -0.91
PTP4A1-207ENST00000639568 C16orf58Q96GQ5 468 aa9.36□□□□□ -0.91
PTP4A1-207ENST00000639568 ALKBH3Q96Q83 286 aaPredicted RBP9.36□□□□□ -0.91
PTP4A1-207ENST00000639568 ACPTQ9BZG2 426 aa9.36□□□□□ -0.91
PTP4A1-207ENST00000639568 FN3KRPQ9HA64 309 aa9.36□□□□□ -0.91
PTP4A1-207ENST00000639568 LZTFL1Q9NQ48 299 aa9.36□□□□□ -0.91
PTP4A1-207ENST00000639568 NECAP2Q9NVZ3 263 aa9.36□□□□□ -0.91
PTP4A1-207ENST00000639568 TMEM181Q9P2C4 612 aa9.36□□□□□ -0.91
PTP4A1-207ENST00000639568 TMCO1Q9UM00 188 aa9.36□□□□□ -0.91
PTP4A1-207ENST00000639568 FZR1Q9UM11 496 aa9.36□□□□□ -0.91
PTP4A1-207ENST00000639568 TRAPPC4Q9Y296 219 aa9.36□□□□□ -0.91
PTP4A1-207ENST00000639568 COL7A1Q02388 2944 aa9.35□□□□□ -0.91
PTP4A1-207ENST00000639568 IGHV3OR16-10A0A075B7F0 116 aa9.35□□□□□ -0.91
PTP4A1-207ENST00000639568 GIMAP1-GIMAP5A0A087WTJ2 511 aa9.35□□□□□ -0.91
PTP4A1-207ENST00000639568 STX16-NPEPL1H3BU86 382 aa9.35□□□□□ -0.91
PTP4A1-207ENST00000639568 PPP6CO00743 305 aa9.35□□□□□ -0.91
PTP4A1-207ENST00000639568 STX16O14662 325 aa9.35□□□□□ -0.91
PTP4A1-207ENST00000639568 PDPK1O15530 556 aa9.35□□□□□ -0.91
PTP4A1-207ENST00000639568 FRS3O43559 492 aa9.35□□□□□ -0.91
PTP4A1-207ENST00000639568 SMIM24O75264 130 aa9.35□□□□□ -0.91
PTP4A1-207ENST00000639568 CLPXO76031 633 aa9.35□□□□□ -0.91
PTP4A1-207ENST00000639568 OR4F21O95013 312 aa9.35□□□□□ -0.91
PTP4A1-207ENST00000639568 KLHL2O95198 593 aa9.35□□□□□ -0.91
PTP4A1-207ENST00000639568 OPN1MWP04001 364 aa9.35□□□□□ -0.91
PTP4A1-207ENST00000639568 MYZAPP0CAP1 466 aa9.35□□□□□ -0.91
PTP4A1-207ENST00000639568 OPN1MW2P0DN77 364 aa9.35□□□□□ -0.91
PTP4A1-207ENST00000639568 OPN1MW3P0DN78 364 aa9.35□□□□□ -0.91
PTP4A1-207ENST00000639568 TSPAN8P19075 237 aa9.35□□□□□ -0.91
PTP4A1-207ENST00000639568 IVDP26440 423 aa9.35□□□□□ -0.91
PTP4A1-207ENST00000639568 SSTR1P30872 391 aa9.35□□□□□ -0.91
PTP4A1-207ENST00000639568 GLRXP35754 106 aa9.35□□□□□ -0.91
PTP4A1-207ENST00000639568 CRYBB2P43320 205 aa9.35□□□□□ -0.91
PTP4A1-207ENST00000639568 SH3BGRP55822 239 aaPredicted RBP9.35□□□□□ -0.91
PTP4A1-207ENST00000639568 SELENOVP59797 346 aa9.35□□□□□ -0.91
PTP4A1-207ENST00000639568 GALK2Q01415 458 aa9.35□□□□□ -0.91
PTP4A1-207ENST00000639568 TRMT5Q32P41 509 aaKnown RBP9.35□□□□□ -0.91
PTP4A1-207ENST00000639568 PCGF3Q3KNV8 242 aa9.35□□□□□ -0.91
PTP4A1-207ENST00000639568 ALKBH6Q3KRA9 238 aa9.35□□□□□ -0.91
PTP4A1-207ENST00000639568 FAM205BPQ63HN1 556 aa9.35□□□□□ -0.91
PTP4A1-207ENST00000639568 FAM71E1Q6IPT2 247 aa9.35□□□□□ -0.91
PTP4A1-207ENST00000639568 PAQR6Q6TCH4 344 aa9.35□□□□□ -0.91
PTP4A1-207ENST00000639568 CCBE1Q6UXH8 406 aaPredicted RBP9.35□□□□□ -0.91
PTP4A1-207ENST00000639568 C9orf139Q6ZV77 190 aa9.35□□□□□ -0.91
PTP4A1-207ENST00000639568 RPS27LQ71UM5 84 aaKnown RBP9.35□□□□□ -0.91
PTP4A1-207ENST00000639568 GPAT4Q86UL3 456 aa9.35□□□□□ -0.91
PTP4A1-207ENST00000639568 LRP11Q86VZ4 500 aa9.35□□□□□ -0.91
PTP4A1-207ENST00000639568 TMEM139Q8IV31 216 aa9.35□□□□□ -0.91
PTP4A1-207ENST00000639568 ZNF563Q8TA94 476 aa9.35□□□□□ -0.91
PTP4A1-207ENST00000639568 MGARPQ8TDB4 240 aa9.35□□□□□ -0.91
PTP4A1-207ENST00000639568 CDS1Q92903 461 aa9.35□□□□□ -0.91
PTP4A1-207ENST00000639568 GIMAP5Q96F15 307 aa9.35□□□□□ -0.91
PTP4A1-207ENST00000639568 PBKQ96KB5 322 aa9.35□□□□□ -0.91
PTP4A1-207ENST00000639568 OR11A1Q9GZK7 315 aa9.35□□□□□ -0.91
PTP4A1-207ENST00000639568 MMP26Q9NRE1 261 aa9.35□□□□□ -0.91
PTP4A1-207ENST00000639568 CTPS2Q9NRF8 586 aa9.35□□□□□ -0.91
PTP4A1-207ENST00000639568 DUSP22Q9NRW4 184 aa9.35□□□□□ -0.91
PTP4A1-207ENST00000639568 DECR2Q9NUI1 292 aa9.35□□□□□ -0.91
PTP4A1-207ENST00000639568 ACER3Q9NUN7 267 aa9.35□□□□□ -0.91
PTP4A1-207ENST00000639568 LEF1Q9UJU2 399 aaPredicted RBP9.35□□□□□ -0.91
PTP4A1-207ENST00000639568 TCRBV9S1A1TA0A576 114 aa9.34□□□□□ -0.91
PTP4A1-207ENST00000639568 FAM159BA6NKW6 160 aa9.34□□□□□ -0.91
PTP4A1-207ENST00000639568 SRRM5B3KS81 715 aa9.34□□□□□ -0.91
PTP4A1-207ENST00000639568 C2P06681 752 aa9.34□□□□□ -0.91
PTP4A1-207ENST00000639568 BCKDHAP12694 445 aa9.34□□□□□ -0.91
PTP4A1-207ENST00000639568 CCNA2P20248 432 aa9.34□□□□□ -0.91
PTP4A1-207ENST00000639568 HMOX2P30519 316 aa9.34□□□□□ -0.91
PTP4A1-207ENST00000639568 CDH13P55290 713 aa9.34□□□□□ -0.91
PTP4A1-207ENST00000639568 MSMPQ1L6U9 139 aa9.34□□□□□ -0.91
PTP4A1-207ENST00000639568 PARP8Q8N3A8 854 aa9.34□□□□□ -0.91
PTP4A1-207ENST00000639568 OR9K2Q8NGE7 335 aa9.34□□□□□ -0.91
PTP4A1-207ENST00000639568 LINC01006Q8NI28 216 aa9.34□□□□□ -0.91
PTP4A1-207ENST00000639568 METTL6Q8TCB7 284 aa9.34□□□□□ -0.91
PTP4A1-207ENST00000639568 SNX33Q8WV41 574 aa9.34□□□□□ -0.91
PTP4A1-207ENST00000639568 SLC47A1Q96FL8 570 aa9.34□□□□□ -0.91
PTP4A1-207ENST00000639568 ZNF385AQ96PM9 386 aaKnown RBP9.34□□□□□ -0.91
PTP4A1-207ENST00000639568 STACQ99469 402 aa9.34□□□□□ -0.91
PTP4A1-207ENST00000639568 CCDC106Q9BWC9 280 aa9.34□□□□□ -0.91
PTP4A1-207ENST00000639568 LAT2Q9GZY6 243 aa9.34□□□□□ -0.91
PTP4A1-207ENST00000639568 HINT3Q9NQE9 182 aaKnown RBP9.34□□□□□ -0.91
PTP4A1-207ENST00000639568 MYEF2Q9P2K5 600 aaKnown RBP9.34□□□□□ -0.91
PTP4A1-207ENST00000639568 SOX21Q9Y651 276 aaPredicted RBP9.34□□□□□ -0.91
PTP4A1-207ENST00000639568 WNK2Q9Y3S1 2297 aa9.33□□□□□ -0.92
PTP4A1-207ENST00000639568 MDFIC2A0A1B0GVS7 189 aa9.33□□□□□ -0.92
PTP4A1-207ENST00000639568 C17orf100A8MU93 164 aa9.33□□□□□ -0.92
PTP4A1-207ENST00000639568 TRIM49D1C9J1S8 452 aa9.33□□□□□ -0.92
PTP4A1-207ENST00000639568 E7ESA3 106 aa9.33□□□□□ -0.92
PTP4A1-207ENST00000639568 CSTAP01040 98 aa9.33□□□□□ -0.92
PTP4A1-207ENST00000639568 IGHMP01871 453 aa9.33□□□□□ -0.92
PTP4A1-207ENST00000639568 RBP1P09455 135 aa9.33□□□□□ -0.92
PTP4A1-207ENST00000639568 UBTFL6P0CB48 400 aaPredicted RBP9.33□□□□□ -0.92
PTP4A1-207ENST00000639568 IGHV4-38-2P0DP08 117 aa9.33□□□□□ -0.92
PTP4A1-207ENST00000639568 ROR2Q01974 943 aaKnown RBP9.33□□□□□ -0.92
PTP4A1-207ENST00000639568 SKP2Q13309 424 aa9.33□□□□□ -0.92
PTP4A1-207ENST00000639568 RASA2Q15283 850 aa9.33□□□□□ -0.92
PTP4A1-207ENST00000639568 DCST2Q5T1A1 773 aa9.33□□□□□ -0.92
PTP4A1-207ENST00000639568 TMEM225Q6GV28 225 aa9.33□□□□□ -0.92
PTP4A1-207ENST00000639568 ZNF620Q6ZNG0 422 aa9.33□□□□□ -0.92
PTP4A1-207ENST00000639568 C3orf62Q6ZUJ4 267 aa9.33□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms