RNA–Protein interactions for RNA: ENST00000637809.1

CACNA1A-250, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 871 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-250ENST00000637809 LRRC74BQ6ZQY2 392 aa10.55□□□□□ -0.72
CACNA1A-250ENST00000637809 OR1K1Q8NGR3 316 aa10.55□□□□□ -0.72
CACNA1A-250ENST00000637809 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP10.55□□□□□ -0.72
CACNA1A-250ENST00000637809 BCL2L2Q92843 193 aaPredicted RBP10.55□□□□□ -0.72
CACNA1A-250ENST00000637809 C3orf49Q96BT1 292 aa10.55□□□□□ -0.72
CACNA1A-250ENST00000637809 AURKBQ96GD4 344 aaPredicted RBP10.55□□□□□ -0.72
CACNA1A-250ENST00000637809 TEX37Q96LM6 180 aa10.55□□□□□ -0.72
CACNA1A-250ENST00000637809 CCDC115Q96NT0 180 aa10.55□□□□□ -0.72
CACNA1A-250ENST00000637809 NELFAQ9H3P2 528 aa10.55□□□□□ -0.72
CACNA1A-250ENST00000637809 PLK3Q9H4B4 646 aa10.55□□□□□ -0.72
CACNA1A-250ENST00000637809 PIF1Q9H611 641 aa10.55□□□□□ -0.72
CACNA1A-250ENST00000637809 MTHFD2LQ9H903 347 aaPredicted RBP10.55□□□□□ -0.72
CACNA1A-250ENST00000637809 SEC61A2Q9H9S3 476 aa10.55□□□□□ -0.72
CACNA1A-250ENST00000637809 MYOZ1Q9NP98 299 aaPredicted RBP10.55□□□□□ -0.72
CACNA1A-250ENST00000637809 RLIMQ9NVW2 624 aa10.55□□□□□ -0.72
CACNA1A-250ENST00000637809 CRNNQ9UBG3 495 aaPredicted RBP10.55□□□□□ -0.72
CACNA1A-250ENST00000637809 BTNL2Q9UIR0 455 aa10.55□□□□□ -0.72
CACNA1A-250ENST00000637809 YLPM1P49750 1951 aaKnown RBP10.55□□□□□ -0.72
CACNA1A-250ENST00000637809 ARPC4-TTLL3A0A0A6YYG9 625 aa10.54□□□□□ -0.72
CACNA1A-250ENST00000637809 B9A039 149 aa10.54□□□□□ -0.72
CACNA1A-250ENST00000637809 PDE5AO76074 875 aa10.54□□□□□ -0.72
CACNA1A-250ENST00000637809 TGFAP01135 160 aa10.54□□□□□ -0.72
CACNA1A-250ENST00000637809 IGLV1-44P01699 117 aa10.54□□□□□ -0.72
CACNA1A-250ENST00000637809 CECR9P0C854 216 aa10.54□□□□□ -0.72
CACNA1A-250ENST00000637809 CALCRP30988 508 aa10.54□□□□□ -0.72
CACNA1A-250ENST00000637809 ACAA2P42765 397 aaKnown RBP10.54□□□□□ -0.72
CACNA1A-250ENST00000637809 CDKN2CP42773 168 aa10.54□□□□□ -0.72
CACNA1A-250ENST00000637809 SELENOPP49908 381 aa10.54□□□□□ -0.72
CACNA1A-250ENST00000637809 PPOXP50336 477 aa10.54□□□□□ -0.72
CACNA1A-250ENST00000637809 NAAAQ02083 359 aa10.54□□□□□ -0.72
CACNA1A-250ENST00000637809 CARTPTQ16568 116 aa10.54□□□□□ -0.72
CACNA1A-250ENST00000637809 GSTA3Q16772 222 aa10.54□□□□□ -0.72
CACNA1A-250ENST00000637809 CR1LQ2VPA4 569 aa10.54□□□□□ -0.72
CACNA1A-250ENST00000637809 C3orf36Q3SXR2 165 aa10.54□□□□□ -0.72
CACNA1A-250ENST00000637809 FAM174BQ3ZCQ3 159 aa10.54□□□□□ -0.72
CACNA1A-250ENST00000637809 COX20Q5RI15 118 aa10.54□□□□□ -0.72
CACNA1A-250ENST00000637809 MALRD1Q5VYJ5 2156 aa10.54□□□□□ -0.72
CACNA1A-250ENST00000637809 ANKRD16Q6P6B7 361 aa10.54□□□□□ -0.72
CACNA1A-250ENST00000637809 CREB3L2Q70SY1 520 aa10.54□□□□□ -0.72
CACNA1A-250ENST00000637809 SLC46A3Q7Z3Q1 461 aa10.54□□□□□ -0.72
CACNA1A-250ENST00000637809 SPATA19Q7Z5L4 167 aa10.54□□□□□ -0.72
CACNA1A-250ENST00000637809 VPS37AQ8NEZ2 397 aa10.54□□□□□ -0.72
CACNA1A-250ENST00000637809 MAGEE2Q8TD90 523 aaPredicted RBP10.54□□□□□ -0.72
CACNA1A-250ENST00000637809 WDR60Q8WVS4 1066 aa10.54□□□□□ -0.72
CACNA1A-250ENST00000637809 PKNOX2Q96KN3 472 aa10.54□□□□□ -0.72
CACNA1A-250ENST00000637809 VRK1Q99986 396 aaPredicted RBP10.54□□□□□ -0.72
CACNA1A-250ENST00000637809 TMEM45AQ9NWC5 275 aa10.54□□□□□ -0.72
CACNA1A-250ENST00000637809 TENM1Q9UKZ4 2725 aa10.54□□□□□ -0.72
CACNA1A-250ENST00000637809 LRP5LA4QPB2 252 aa10.53□□□□□ -0.72
CACNA1A-250ENST00000637809 CDHR4A6H8M9 788 aa10.53□□□□□ -0.72
CACNA1A-250ENST00000637809 CCDC154A6NI56 674 aa10.53□□□□□ -0.72
CACNA1A-250ENST00000637809 E9PBE3 544 aa10.53□□□□□ -0.72
CACNA1A-250ENST00000637809 HAX1O00165 279 aa10.53□□□□□ -0.72
CACNA1A-250ENST00000637809 NR5A2O00482 541 aa10.53□□□□□ -0.72
CACNA1A-250ENST00000637809 NPIPB7O75200 414 aa10.53□□□□□ -0.72
CACNA1A-250ENST00000637809 UPK3AO75631 287 aa10.53□□□□□ -0.72
CACNA1A-250ENST00000637809 STAMBPO95630 424 aa10.53□□□□□ -0.72
CACNA1A-250ENST00000637809 CRYAAP02489 173 aa10.53□□□□□ -0.72
CACNA1A-250ENST00000637809 SERPINE1P05121 402 aa10.53□□□□□ -0.72
CACNA1A-250ENST00000637809 PGRP06401 933 aa10.53□□□□□ -0.72
CACNA1A-250ENST00000637809 DBIP07108 87 aaKnown RBP10.53□□□□□ -0.72
CACNA1A-250ENST00000637809 IGFBP1P08833 259 aaPredicted RBP10.53□□□□□ -0.72
CACNA1A-250ENST00000637809 MYZAPP0CAP1 466 aa10.53□□□□□ -0.72
CACNA1A-250ENST00000637809 GKN3PP0CG01 181 aa10.53□□□□□ -0.72
CACNA1A-250ENST00000637809 IL7RP16871 459 aa10.53□□□□□ -0.72
CACNA1A-250ENST00000637809 HNF1AP20823 631 aa10.53□□□□□ -0.72
CACNA1A-250ENST00000637809 GIFP27352 417 aa10.53□□□□□ -0.72
CACNA1A-250ENST00000637809 IL12AP29459 219 aa10.53□□□□□ -0.72
CACNA1A-250ENST00000637809 IL2RGP31785 369 aa10.53□□□□□ -0.72
CACNA1A-250ENST00000637809 IDH3GP51553 393 aaPredicted RBP10.53□□□□□ -0.72
CACNA1A-250ENST00000637809 CLNS1AP54105 237 aaKnown RBP10.53□□□□□ -0.72
CACNA1A-250ENST00000637809 ABCE1P61221 599 aaKnown RBP10.53□□□□□ -0.72
CACNA1A-250ENST00000637809 TUBA1BP68363 451 aa10.53□□□□□ -0.72
CACNA1A-250ENST00000637809 TUBA4AP68366 448 aa10.53□□□□□ -0.72
CACNA1A-250ENST00000637809 HGFACQ04756 655 aa10.53□□□□□ -0.72
CACNA1A-250ENST00000637809 BNIP2Q12982 314 aa10.53□□□□□ -0.72
CACNA1A-250ENST00000637809 SQLEQ14534 574 aa10.53□□□□□ -0.72
CACNA1A-250ENST00000637809 DPY19L1Q2PZI1 675 aa10.53□□□□□ -0.72
CACNA1A-250ENST00000637809 IQCCQ4KMZ1 466 aa10.53□□□□□ -0.72
CACNA1A-250ENST00000637809 TUBA1AQ71U36 451 aa10.53□□□□□ -0.72
CACNA1A-250ENST00000637809 ABHD12BQ7Z5M8 362 aaPredicted RBP10.53□□□□□ -0.72
CACNA1A-250ENST00000637809 GPAT4Q86UL3 456 aa10.53□□□□□ -0.72
CACNA1A-250ENST00000637809 MYPOPQ86VE0 399 aaPredicted RBP10.53□□□□□ -0.72
CACNA1A-250ENST00000637809 EPHX4Q8IUS5 362 aa10.53□□□□□ -0.72
CACNA1A-250ENST00000637809 NUDCD3Q8IVD9 361 aa10.53□□□□□ -0.72
CACNA1A-250ENST00000637809 LRRC34Q8IZ02 419 aa10.53□□□□□ -0.72
CACNA1A-250ENST00000637809 FAM169BQ8N8A8 192 aa10.53□□□□□ -0.72
CACNA1A-250ENST00000637809 ZNF540Q8NDQ6 660 aa10.53□□□□□ -0.72
CACNA1A-250ENST00000637809 C1orf159Q96HA4 380 aa10.53□□□□□ -0.72
CACNA1A-250ENST00000637809 ZNF317Q96PQ6 595 aaPredicted RBP10.53□□□□□ -0.72
CACNA1A-250ENST00000637809 ALKBH3Q96Q83 286 aaPredicted RBP10.53□□□□□ -0.72
CACNA1A-250ENST00000637809 SORT1Q99523 831 aa10.53□□□□□ -0.72
CACNA1A-250ENST00000637809 HAO1Q9UJM8 370 aa10.53□□□□□ -0.72
CACNA1A-250ENST00000637809 ARFGEF3Q5TH69 2177 aa10.53□□□□□ -0.72
CACNA1A-250ENST00000637809 DSPPQ9NZW4 1301 aa10.53□□□□□ -0.72
CACNA1A-250ENST00000637809 A0A096LPE4 126 aa10.52□□□□□ -0.73
CACNA1A-250ENST00000637809 A0A1W2PPZ6 126 aa10.52□□□□□ -0.73
CACNA1A-250ENST00000637809 WDR91A4D1P6 747 aa10.52□□□□□ -0.73
CACNA1A-250ENST00000637809 ZNF587BE7ETH6 402 aa10.52□□□□□ -0.73
CACNA1A-250ENST00000637809 FRS3O43559 492 aa10.52□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms