RNA–Protein interactions for RNA: ENST00000637519.1

CHRNA7-228, Transcript of cholinergic receptor nicotinic alpha 7 subunit, humanhuman

TSL 5

Gene CHRNA7, Length 2,084 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA7-228ENST00000637519 IFNGP01579 166 aa19.64■□□□□ 0.74
CHRNA7-228ENST00000637519 FBXO45P0C2W1 286 aa19.64■□□□□ 0.74
CHRNA7-228ENST00000637519 RPL18Q07020 188 aaKnown RBP19.64■□□□□ 0.74
CHRNA7-228ENST00000637519 ALG10Q5BKT4 473 aa19.64■□□□□ 0.74
CHRNA7-228ENST00000637519 PRAMEF20Q5VT98 475 aa19.64■□□□□ 0.74
CHRNA7-228ENST00000637519 C19orf48Q6RUI8 117 aa19.64■□□□□ 0.74
CHRNA7-228ENST00000637519 SPACA9Q96E40 222 aaPredicted RBP19.64■□□□□ 0.74
CHRNA7-228ENST00000637519 TAAR9Q96RI9 348 aa19.64■□□□□ 0.74
CHRNA7-228ENST00000637519 DCSTAMPQ9H295 470 aa19.64■□□□□ 0.74
CHRNA7-228ENST00000637519 C12orf10Q9HB07 376 aa19.64■□□□□ 0.74
CHRNA7-228ENST00000637519 TIMMDC1Q9NPL8 285 aa19.64■□□□□ 0.74
CHRNA7-228ENST00000637519 ERVK13-1Q9NX77 482 aa19.64■□□□□ 0.74
CHRNA7-228ENST00000637519 TMEM129A0AVI4 362 aa19.64■□□□□ 0.73
CHRNA7-228ENST00000637519 C12orf71A8MTZ7 269 aa19.64■□□□□ 0.73
CHRNA7-228ENST00000637519 J3QRE1 110 aa19.64■□□□□ 0.73
CHRNA7-228ENST00000637519 PLD2O14939 933 aa19.64■□□□□ 0.73
CHRNA7-228ENST00000637519 SLC25A12O75746 678 aa19.64■□□□□ 0.73
CHRNA7-228ENST00000637519 DLGAP3O95886 979 aa19.64■□□□□ 0.73
CHRNA7-228ENST00000637519 MT-CO3P00414 261 aa19.64■□□□□ 0.73
CHRNA7-228ENST00000637519 IGHA1P01876 353 aa19.64■□□□□ 0.73
CHRNA7-228ENST00000637519 ENDOUP21128 410 aaKnown RBP19.64■□□□□ 0.73
CHRNA7-228ENST00000637519 C17orf67Q0P5P2 114 aa19.64■□□□□ 0.73
CHRNA7-228ENST00000637519 MLLT11Q13015 90 aaPredicted RBP19.64■□□□□ 0.73
CHRNA7-228ENST00000637519 NUP54Q7Z3B4 507 aa19.64■□□□□ 0.73
CHRNA7-228ENST00000637519 GRINAQ7Z429 371 aa19.64■□□□□ 0.73
CHRNA7-228ENST00000637519 MISPQ8IVT2 679 aa19.64■□□□□ 0.73
CHRNA7-228ENST00000637519 LRRC75AQ8NAA5 344 aa19.64■□□□□ 0.73
CHRNA7-228ENST00000637519 RACGAP1Q9H0H5 632 aa19.64■□□□□ 0.73
CHRNA7-228ENST00000637519 RERGLQ9H628 205 aa19.64■□□□□ 0.73
CHRNA7-228ENST00000637519 TCFL5Q9UL49 500 aa19.64■□□□□ 0.73
CHRNA7-228ENST00000637519 CELSR3Q9NYQ7 3312 aa19.63■□□□□ 0.73
CHRNA7-228ENST00000637519 NSG1A0A0A6YYJ2 146 aa19.63■□□□□ 0.73
CHRNA7-228ENST00000637519 CLPXO76031 633 aa19.63■□□□□ 0.73
CHRNA7-228ENST00000637519 BGLAPP02818 100 aa19.63■□□□□ 0.73
CHRNA7-228ENST00000637519 NAGAP17050 411 aa19.63■□□□□ 0.73
CHRNA7-228ENST00000637519 PRKCAP17252 672 aa19.63■□□□□ 0.73
CHRNA7-228ENST00000637519 UQCRC1P31930 480 aa19.63■□□□□ 0.73
CHRNA7-228ENST00000637519 TMED10P49755 219 aaKnown RBP19.63■□□□□ 0.73
CHRNA7-228ENST00000637519 LIMK1P53667 647 aa19.63■□□□□ 0.73
CHRNA7-228ENST00000637519 PRPS1P60891 318 aa19.63■□□□□ 0.73
CHRNA7-228ENST00000637519 NANOGNBQ7Z5D8 188 aa19.63■□□□□ 0.73
CHRNA7-228ENST00000637519 PHC2Q8IXK0 858 aa19.63■□□□□ 0.73
CHRNA7-228ENST00000637519 RNF138Q8WVD3 245 aa19.63■□□□□ 0.73
CHRNA7-228ENST00000637519 TMEM203Q969S6 136 aa19.63■□□□□ 0.73
CHRNA7-228ENST00000637519 ZMYND19Q96E35 227 aaPredicted RBP19.63■□□□□ 0.73
CHRNA7-228ENST00000637519 CPAMD8Q8IZJ3 1885 aa19.63■□□□□ 0.73
CHRNA7-228ENST00000637519 OR6C68A6NDL8 312 aa19.63■□□□□ 0.73
CHRNA7-228ENST00000637519 ANKUB1A6NFN9 424 aa19.63■□□□□ 0.73
CHRNA7-228ENST00000637519 CTXN1P60606 82 aa19.63■□□□□ 0.73
CHRNA7-228ENST00000637519 E2F1Q01094 437 aa19.63■□□□□ 0.73
CHRNA7-228ENST00000637519 NTRK2Q16620 822 aa19.63■□□□□ 0.73
CHRNA7-228ENST00000637519 HES3Q5TGS1 186 aa19.63■□□□□ 0.73
CHRNA7-228ENST00000637519 LYPD4Q6UWN0 246 aa19.63■□□□□ 0.73
CHRNA7-228ENST00000637519 IL20RBQ6UXL0 311 aa19.63■□□□□ 0.73
CHRNA7-228ENST00000637519 PPP1R32Q7Z5V6 425 aa19.63■□□□□ 0.73
CHRNA7-228ENST00000637519 MARCH9Q86YJ5 346 aa19.63■□□□□ 0.73
CHRNA7-228ENST00000637519 ZNF485Q8NCK3 441 aa19.63■□□□□ 0.73
CHRNA7-228ENST00000637519 NPEPL1Q8NDH3 523 aa19.63■□□□□ 0.73
CHRNA7-228ENST00000637519 OR10H4Q8NGA5 316 aa19.63■□□□□ 0.73
CHRNA7-228ENST00000637519 SPRYD4Q8WW59 207 aaPredicted RBP19.63■□□□□ 0.73
CHRNA7-228ENST00000637519 LIPHQ8WWY8 451 aa19.63■□□□□ 0.73
CHRNA7-228ENST00000637519 TTC9Q92623 222 aa19.63■□□□□ 0.73
CHRNA7-228ENST00000637519 LIN37Q96GY3 246 aaPredicted RBP19.63■□□□□ 0.73
CHRNA7-228ENST00000637519 TTTY10Q9BZA0 68 aa19.63■□□□□ 0.73
CHRNA7-228ENST00000637519 ISG20L2Q9H9L3 353 aaKnown RBP19.63■□□□□ 0.73
CHRNA7-228ENST00000637519 ADGRL4Q9HBW9 690 aa19.63■□□□□ 0.73
CHRNA7-228ENST00000637519 EXOSC4Q9NPD3 245 aaKnown RBP19.63■□□□□ 0.73
CHRNA7-228ENST00000637519 PPP4R1LQ9P1A2 415 aa19.63■□□□□ 0.73
CHRNA7-228ENST00000637519 SDK2Q58EX2 2172 aa19.62■□□□□ 0.73
CHRNA7-228ENST00000637519 TRAV36DV7A0A075B6V5 113 aa19.62■□□□□ 0.73
CHRNA7-228ENST00000637519 SLC22A31A6NKX4 558 aa19.62■□□□□ 0.73
CHRNA7-228ENST00000637519 H7C1C5 153 aa19.62■□□□□ 0.73
CHRNA7-228ENST00000637519 IGF2P01344 180 aa19.62■□□□□ 0.73
CHRNA7-228ENST00000637519 IL11P20809 199 aa19.62■□□□□ 0.73
CHRNA7-228ENST00000637519 LCN6P62502 163 aa19.62■□□□□ 0.73
CHRNA7-228ENST00000637519 FOXF1Q12946 379 aa19.62■□□□□ 0.73
CHRNA7-228ENST00000637519 EXT1Q16394 746 aa19.62■□□□□ 0.73
CHRNA7-228ENST00000637519 SLC43A2Q8N370 569 aa19.62■□□□□ 0.73
CHRNA7-228ENST00000637519 RFLNBQ8N5W9 214 aa19.62■□□□□ 0.73
CHRNA7-228ENST00000637519 LSM14AQ8ND56 463 aaKnown RBP19.62■□□□□ 0.73
CHRNA7-228ENST00000637519 GPX7Q96SL4 187 aaPredicted RBP19.62■□□□□ 0.73
CHRNA7-228ENST00000637519 ASB6Q9NWX5 421 aa19.62■□□□□ 0.73
CHRNA7-228ENST00000637519 NDUFB11Q9NX14 153 aa19.62■□□□□ 0.73
CHRNA7-228ENST00000637519 ZNF346Q9UL40 294 aaKnown RBP19.62■□□□□ 0.73
CHRNA7-228ENST00000637519 WIF1Q9Y5W5 379 aa19.62■□□□□ 0.73
CHRNA7-228ENST00000637519 C11orf98E9PRG8 122 aa19.61■□□□□ 0.73
CHRNA7-228ENST00000637519 CASP3P42574 277 aa19.61■□□□□ 0.73
CHRNA7-228ENST00000637519 HCCSP53701 268 aa19.61■□□□□ 0.73
CHRNA7-228ENST00000637519 FAM122BQ7Z309 247 aa19.61■□□□□ 0.73
CHRNA7-228ENST00000637519 ATP6V1C2Q8NEY4 427 aa19.61■□□□□ 0.73
CHRNA7-228ENST00000637519 CDCP1Q9H5V8 836 aa19.61■□□□□ 0.73
CHRNA7-228ENST00000637519 FBXL2Q9UKC9 423 aa19.61■□□□□ 0.73
CHRNA7-228ENST00000637519 PCSK5Q92824 1860 aa19.61■□□□□ 0.73
CHRNA7-228ENST00000637519 OTOGLQ3ZCN5 2332 aa19.61■□□□□ 0.73
CHRNA7-228ENST00000637519 FAM171A2A8MVW0 826 aa19.61■□□□□ 0.73
CHRNA7-228ENST00000637519 NPIPB7O75200 414 aa19.61■□□□□ 0.73
CHRNA7-228ENST00000637519 CDKN2AP42771 156 aaKnown RBP19.61■□□□□ 0.73
CHRNA7-228ENST00000637519 FOXK1P85037 733 aa19.61■□□□□ 0.73
CHRNA7-228ENST00000637519 C1orf140Q5VVS0 124 aa19.61■□□□□ 0.73
CHRNA7-228ENST00000637519 LEG1Q6P5S2 330 aa19.61■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms