RNA–Protein interactions for RNA: ENST00000637494.1

CLN6-221, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5 BASIC

Gene CLN6, Length 765 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-221ENST00000637494 OR9K2Q8NGE7 335 aa16.7■□□□□ 0.26
CLN6-221ENST00000637494 OR52E4Q8NGH9 312 aa16.7■□□□□ 0.26
CLN6-221ENST00000637494 LILRB1Q8NHL6 650 aaPredicted RBP16.7■□□□□ 0.26
CLN6-221ENST00000637494 NFKBIDQ8NI38 313 aa16.7■□□□□ 0.26
CLN6-221ENST00000637494 STK35Q8TDR2 534 aa16.7■□□□□ 0.26
CLN6-221ENST00000637494 C3orf49Q96BT1 292 aa16.7■□□□□ 0.26
CLN6-221ENST00000637494 POM121Q96HA1 1249 aa16.7■□□□□ 0.26
CLN6-221ENST00000637494 MAGEB18Q96M61 343 aa16.7■□□□□ 0.26
CLN6-221ENST00000637494 ZNF607Q96SK3 696 aa16.7■□□□□ 0.26
CLN6-221ENST00000637494 CISD1Q9NZ45 108 aaKnown RBP16.7■□□□□ 0.26
CLN6-221ENST00000637494 SELENONQ9NZV5 590 aa16.7■□□□□ 0.26
CLN6-221ENST00000637494 SLC13A4Q9UKG4 626 aa16.7■□□□□ 0.26
CLN6-221ENST00000637494 TRIM33Q9UPN9 1127 aa16.7■□□□□ 0.26
CLN6-221ENST00000637494 MAGED1Q9Y5V3 778 aaPredicted RBP16.7■□□□□ 0.26
CLN6-221ENST00000637494 FRS3O43559 492 aa16.69■□□□□ 0.26
CLN6-221ENST00000637494 ARAFP10398 606 aa16.69■□□□□ 0.26
CLN6-221ENST00000637494 SLC6A2P23975 617 aa16.69■□□□□ 0.26
CLN6-221ENST00000637494 PTAFRP25105 342 aa16.69■□□□□ 0.26
CLN6-221ENST00000637494 ZNF83P51522 516 aa16.69■□□□□ 0.26
CLN6-221ENST00000637494 CDK6Q00534 326 aa16.69■□□□□ 0.26
CLN6-221ENST00000637494 LTBQ06643 244 aa16.69■□□□□ 0.26
CLN6-221ENST00000637494 ETFDHQ16134 617 aa16.69■□□□□ 0.26
CLN6-221ENST00000637494 GABRA6Q16445 453 aa16.69■□□□□ 0.26
CLN6-221ENST00000637494 C1QTNF12Q5T7M4 302 aa16.69■□□□□ 0.26
CLN6-221ENST00000637494 C17orf78Q8N4C9 275 aa16.69■□□□□ 0.26
CLN6-221ENST00000637494 BHLHE22Q8NFJ8 381 aaPredicted RBP16.69■□□□□ 0.26
CLN6-221ENST00000637494 CKAP2Q8WWK9 683 aa16.69■□□□□ 0.26
CLN6-221ENST00000637494 MUS81Q96NY9 551 aa16.69■□□□□ 0.26
CLN6-221ENST00000637494 SMR3AQ99954 134 aa16.69■□□□□ 0.26
CLN6-221ENST00000637494 TRIM2Q9C040 744 aa16.69■□□□□ 0.26
CLN6-221ENST00000637494 SLCO5A1Q9H2Y9 848 aa16.69■□□□□ 0.26
CLN6-221ENST00000637494 SLC25A37Q9NYZ2 338 aa16.69■□□□□ 0.26
CLN6-221ENST00000637494 RASD1Q9Y272 281 aa16.69■□□□□ 0.26
CLN6-221ENST00000637494 AMDHD2Q9Y303 409 aa16.69■□□□□ 0.26
CLN6-221ENST00000637494 FREM1Q5H8C1 2179 aa16.69■□□□□ 0.26
CLN6-221ENST00000637494 MAP1AP78559 2803 aaPredicted RBP16.68■□□□□ 0.26
CLN6-221ENST00000637494 PRORSD1PA6NEY8 169 aa16.68■□□□□ 0.26
CLN6-221ENST00000637494 OR6C65A6NJZ3 312 aa16.68■□□□□ 0.26
CLN6-221ENST00000637494 SERPINB7O75635 380 aa16.68■□□□□ 0.26
CLN6-221ENST00000637494 WNT11O96014 354 aa16.68■□□□□ 0.26
CLN6-221ENST00000637494 HEXAP06865 529 aa16.68■□□□□ 0.26
CLN6-221ENST00000637494 DANCRP0C864 163 aa16.68■□□□□ 0.26
CLN6-221ENST00000637494 HOXB9P17482 250 aaPredicted RBP16.68■□□□□ 0.26
CLN6-221ENST00000637494 MPGP29372 298 aa16.68■□□□□ 0.26
CLN6-221ENST00000637494 NTF4P34130 210 aa16.68■□□□□ 0.26
CLN6-221ENST00000637494 KRTAP21-3Q3LHN1 58 aa16.68■□□□□ 0.26
CLN6-221ENST00000637494 PAGE3Q5JUK9 113 aa16.68■□□□□ 0.26
CLN6-221ENST00000637494 TSPO2Q5TGU0 170 aa16.68■□□□□ 0.26
CLN6-221ENST00000637494 C9orf135Q5VTT2 229 aa16.68■□□□□ 0.26
CLN6-221ENST00000637494 AGAP6Q5VW22 663 aa16.68■□□□□ 0.26
CLN6-221ENST00000637494 SLC22A25Q6T423 547 aa16.68■□□□□ 0.26
CLN6-221ENST00000637494 C5orf46Q6UWT4 87 aa16.68■□□□□ 0.26
CLN6-221ENST00000637494 SEZ6L2Q6UXD5 910 aa16.68■□□□□ 0.26
CLN6-221ENST00000637494 Q71RC1 249 aaPredicted RBP16.68■□□□□ 0.26
CLN6-221ENST00000637494 ATG4DQ86TL0 474 aaPredicted RBP16.68■□□□□ 0.26
CLN6-221ENST00000637494 MFSD8Q8NHS3 518 aa16.68■□□□□ 0.26
CLN6-221ENST00000637494 STON2Q8WXE9 905 aa16.68■□□□□ 0.26
CLN6-221ENST00000637494 NEUROG1Q92886 237 aa16.68■□□□□ 0.26
CLN6-221ENST00000637494 SLC25A36Q96CQ1 311 aa16.68■□□□□ 0.26
CLN6-221ENST00000637494 C12orf10Q9HB07 376 aa16.68■□□□□ 0.26
CLN6-221ENST00000637494 SLC7A10Q9NS82 523 aa16.68■□□□□ 0.26
CLN6-221ENST00000637494 NPAP1Q9NZP6 1156 aa16.68■□□□□ 0.26
CLN6-221ENST00000637494 VAPAQ9P0L0 249 aa16.68■□□□□ 0.26
CLN6-221ENST00000637494 LEF1Q9UJU2 399 aaPredicted RBP16.68■□□□□ 0.26
CLN6-221ENST00000637494 SLC25A15Q9Y619 301 aa16.68■□□□□ 0.26
CLN6-221ENST00000637494 A0A1W2PR80 420 aa16.67■□□□□ 0.26
CLN6-221ENST00000637494 TRIM64A6NGJ6 449 aa16.67■□□□□ 0.26
CLN6-221ENST00000637494 TRIM64BA6NI03 449 aa16.67■□□□□ 0.26
CLN6-221ENST00000637494 M0R1B8 84 aa16.67■□□□□ 0.26
CLN6-221ENST00000637494 ANGPT2O15123 496 aa16.67■□□□□ 0.26
CLN6-221ENST00000637494 OR2T1O43869 369 aa16.67■□□□□ 0.26
CLN6-221ENST00000637494 SOD3P08294 240 aa16.67■□□□□ 0.26
CLN6-221ENST00000637494 ITGA5P08648 1049 aa16.67■□□□□ 0.26
CLN6-221ENST00000637494 SCARB2Q14108 478 aa16.67■□□□□ 0.26
CLN6-221ENST00000637494 DHRS4L2Q6PKH6 230 aa16.67■□□□□ 0.26
CLN6-221ENST00000637494 RNF217Q8TC41 542 aa16.67■□□□□ 0.26
CLN6-221ENST00000637494 DNAJA4Q8WW22 397 aaPredicted RBP16.67■□□□□ 0.26
CLN6-221ENST00000637494 SIKE1Q9BRV8 207 aa16.67■□□□□ 0.26
CLN6-221ENST00000637494 TMEM38AQ9H6F2 299 aa16.67■□□□□ 0.26
CLN6-221ENST00000637494 EVA1AQ9H8M9 152 aa16.67■□□□□ 0.26
CLN6-221ENST00000637494 SLAMF8Q9P0V8 285 aa16.67■□□□□ 0.26
CLN6-221ENST00000637494 ANGPT4Q9Y264 503 aa16.67■□□□□ 0.26
CLN6-221ENST00000637494 NDUFAF1Q9Y375 327 aa16.67■□□□□ 0.26
CLN6-221ENST00000637494 CHST2Q9Y4C5 530 aa16.67■□□□□ 0.26
CLN6-221ENST00000637494 GMEB1Q9Y692 573 aa16.67■□□□□ 0.26
CLN6-221ENST00000637494 TMEM229AB2RXF0 380 aa16.66■□□□□ 0.26
CLN6-221ENST00000637494 SHISA9B4DS77 424 aa16.66■□□□□ 0.26
CLN6-221ENST00000637494 OVOL3O00110 214 aa16.66■□□□□ 0.26
CLN6-221ENST00000637494 PNMTP11086 282 aa16.66■□□□□ 0.26
CLN6-221ENST00000637494 GPX2P18283 190 aa16.66■□□□□ 0.26
CLN6-221ENST00000637494 CDKN1AP38936 164 aa16.66■□□□□ 0.26
CLN6-221ENST00000637494 RPS5P46782 204 aaKnown RBP16.66■□□□□ 0.26
CLN6-221ENST00000637494 PRPS1P60891 318 aa16.66■□□□□ 0.26
CLN6-221ENST00000637494 HOXC5Q00444 222 aa16.66■□□□□ 0.26
CLN6-221ENST00000637494 CLEC12BQ2HXU8 276 aa16.66■□□□□ 0.26
CLN6-221ENST00000637494 MSRB3Q8IXL7 192 aa16.66■□□□□ 0.26
CLN6-221ENST00000637494 HIPK4Q8NE63 616 aa16.66■□□□□ 0.26
CLN6-221ENST00000637494 SLC38A4Q969I6 547 aa16.66■□□□□ 0.26
CLN6-221ENST00000637494 HS6ST2Q96MM7 605 aa16.66■□□□□ 0.26
CLN6-221ENST00000637494 ZNF385AQ96PM9 386 aaKnown RBP16.66■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms