RNA–Protein interactions for RNA: ENST00000637325.1

PNKP-228, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 100 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-228ENST00000637325 PPA1Q15181 289 aa12.19□□□□□ -0.46
PNKP-228ENST00000637325 TIMM23BQ5SRD1 257 aa12.19□□□□□ -0.46
PNKP-228ENST00000637325 SSX8Q7RTT4 187 aa12.19□□□□□ -0.46
PNKP-228ENST00000637325 ATG4DQ86TL0 474 aaPredicted RBP12.19□□□□□ -0.46
PNKP-228ENST00000637325 RETREG3Q86VR2 466 aa12.19□□□□□ -0.46
PNKP-228ENST00000637325 P2RY8Q86VZ1 359 aa12.19□□□□□ -0.46
PNKP-228ENST00000637325 ARMC8Q8IUR7 673 aa12.19□□□□□ -0.46
PNKP-228ENST00000637325 ZNF433Q8N7K0 673 aaPredicted RBP12.19□□□□□ -0.46
PNKP-228ENST00000637325 C11orf65Q8NCR3 313 aa12.19□□□□□ -0.46
PNKP-228ENST00000637325 OR9K2Q8NGE7 335 aa12.19□□□□□ -0.46
PNKP-228ENST00000637325 AKAP1Q92667 903 aaKnown RBP eCLIP12.19□□□□□ -0.46
PNKP-228ENST00000637325 SLC25A36Q96CQ1 311 aa12.19□□□□□ -0.46
PNKP-228ENST00000637325 TMUB1Q9BVT8 246 aa12.19□□□□□ -0.46
PNKP-228ENST00000637325 SF3B5Q9BWJ5 86 aaKnown RBP12.19□□□□□ -0.46
PNKP-228ENST00000637325 TRIM2Q9C040 744 aa12.19□□□□□ -0.46
PNKP-228ENST00000637325 TMEM27Q9HBJ8 222 aa12.19□□□□□ -0.46
PNKP-228ENST00000637325 MRGBPQ9NV56 204 aa12.19□□□□□ -0.46
PNKP-228ENST00000637325 FGFR1OP2Q9NVK5 253 aa12.19□□□□□ -0.46
PNKP-228ENST00000637325 ZNF446Q9NWS9 450 aa12.19□□□□□ -0.46
PNKP-228ENST00000637325 RNF115Q9Y4L5 304 aa12.19□□□□□ -0.46
PNKP-228ENST00000637325 ZNF469Q96JG9 3925 aaPredicted RBP12.18□□□□□ -0.46
PNKP-228ENST00000637325 AQP7P3A6NL99 342 aa12.18□□□□□ -0.46
PNKP-228ENST00000637325 TMEM229AB2RXF0 380 aa12.18□□□□□ -0.46
PNKP-228ENST00000637325 HS3ST1O14792 307 aa12.18□□□□□ -0.46
PNKP-228ENST00000637325 TPST1O60507 370 aa12.18□□□□□ -0.46
PNKP-228ENST00000637325 RPS5P46782 204 aaKnown RBP12.18□□□□□ -0.46
PNKP-228ENST00000637325 RBBP4Q09028 425 aa12.18□□□□□ -0.46
PNKP-228ENST00000637325 FOXD4Q12950 439 aaPredicted RBP12.18□□□□□ -0.46
PNKP-228ENST00000637325 ADRM1Q16186 407 aa12.18□□□□□ -0.46
PNKP-228ENST00000637325 MMEL1Q495T6 779 aa12.18□□□□□ -0.46
PNKP-228ENST00000637325 NCMAPQ5T1S8 102 aa12.18□□□□□ -0.46
PNKP-228ENST00000637325 SHEQ5VZ18 495 aa12.18□□□□□ -0.46
PNKP-228ENST00000637325 AAED1Q7RTV5 226 aa12.18□□□□□ -0.46
PNKP-228ENST00000637325 TMEM171Q8WVE6 324 aa12.18□□□□□ -0.46
PNKP-228ENST00000637325 DNAJA4Q8WW22 397 aaPredicted RBP12.18□□□□□ -0.46
PNKP-228ENST00000637325 TMEM204Q9BSN7 226 aa12.18□□□□□ -0.46
PNKP-228ENST00000637325 C12orf10Q9HB07 376 aa12.18□□□□□ -0.46
PNKP-228ENST00000637325 TAS2R16Q9NYV7 291 aa12.18□□□□□ -0.46
PNKP-228ENST00000637325 TESQ9UGI8 421 aaKnown RBP12.18□□□□□ -0.46
PNKP-228ENST00000637325 VPS13CQ709C8 3753 aa12.17□□□□□ -0.46
PNKP-228ENST00000637325 A0A1B0GWA3 101 aa12.17□□□□□ -0.46
PNKP-228ENST00000637325 OR5H1A6NKK0 313 aa12.17□□□□□ -0.46
PNKP-228ENST00000637325 KRT33AO76009 404 aa12.17□□□□□ -0.46
PNKP-228ENST00000637325 VAMP5O95183 116 aa12.17□□□□□ -0.46
PNKP-228ENST00000637325 PNMTP11086 282 aa12.17□□□□□ -0.46
PNKP-228ENST00000637325 HTR2AP28223 471 aa12.17□□□□□ -0.46
PNKP-228ENST00000637325 NTF4P34130 210 aa12.17□□□□□ -0.46
PNKP-228ENST00000637325 GUCY1A3Q02108 690 aa12.17□□□□□ -0.46
PNKP-228ENST00000637325 CYLC2Q14093 348 aaPredicted RBP12.17□□□□□ -0.46
PNKP-228ENST00000637325 SELPLGQ14242 412 aa12.17□□□□□ -0.46
PNKP-228ENST00000637325 GLIPR1L2Q4G1C9 344 aa12.17□□□□□ -0.46
PNKP-228ENST00000637325 ALG10BQ5I7T1 473 aa12.17□□□□□ -0.46
PNKP-228ENST00000637325 C9orf135Q5VTT2 229 aa12.17□□□□□ -0.46
PNKP-228ENST00000637325 OR7E24Q6IFN5 339 aa12.17□□□□□ -0.46
PNKP-228ENST00000637325 ULK3Q6PHR2 472 aa12.17□□□□□ -0.46
PNKP-228ENST00000637325 RANBP3LQ86VV4 465 aaPredicted RBP12.17□□□□□ -0.46
PNKP-228ENST00000637325 PTOV1Q86YD1 416 aa12.17□□□□□ -0.46
PNKP-228ENST00000637325 SLC30A8Q8IWU4 369 aa12.17□□□□□ -0.46
PNKP-228ENST00000637325 LRRC75A-AS1Q8N1F1 130 aa12.17□□□□□ -0.46
PNKP-228ENST00000637325 LSMEM1Q8N8F7 131 aa12.17□□□□□ -0.46
PNKP-228ENST00000637325 SMYD1Q8NB12 490 aa12.17□□□□□ -0.46
PNKP-228ENST00000637325 WFDC11Q8NEX6 87 aa12.17□□□□□ -0.46
PNKP-228ENST00000637325 OR52N5Q8NH56 324 aa12.17□□□□□ -0.46
PNKP-228ENST00000637325 OR10A6Q8NH74 314 aa12.17□□□□□ -0.46
PNKP-228ENST00000637325 MFSD8Q8NHS3 518 aa12.17□□□□□ -0.46
PNKP-228ENST00000637325 SLC26A7Q8TE54 656 aa12.17□□□□□ -0.46
PNKP-228ENST00000637325 SLC38A4Q969I6 547 aa12.17□□□□□ -0.46
PNKP-228ENST00000637325 TMEM45BQ96B21 275 aa12.17□□□□□ -0.46
PNKP-228ENST00000637325 SLC47A1Q96FL8 570 aa12.17□□□□□ -0.46
PNKP-228ENST00000637325 PERPQ96FX8 193 aa12.17□□□□□ -0.46
PNKP-228ENST00000637325 PRR14Q9BWN1 585 aa12.17□□□□□ -0.46
PNKP-228ENST00000637325 PIF1Q9H611 641 aa12.17□□□□□ -0.46
PNKP-228ENST00000637325 EVA1AQ9H8M9 152 aa12.17□□□□□ -0.46
PNKP-228ENST00000637325 MALT1Q9UDY8 824 aa12.17□□□□□ -0.46
PNKP-228ENST00000637325 RASD1Q9Y272 281 aa12.17□□□□□ -0.46
PNKP-228ENST00000637325 SETD2Q9BYW2 2564 aaPredicted RBP12.17□□□□□ -0.46
PNKP-228ENST00000637325 DPRXA6NFQ7 191 aa12.16□□□□□ -0.46
PNKP-228ENST00000637325 OR2T1O43869 369 aa12.16□□□□□ -0.46
PNKP-228ENST00000637325 NPIPB7O75200 414 aa12.16□□□□□ -0.46
PNKP-228ENST00000637325 MFN2O95140 757 aa12.16□□□□□ -0.46
PNKP-228ENST00000637325 HOXC12P31275 282 aa12.16□□□□□ -0.46
PNKP-228ENST00000637325 IL1RL1Q01638 556 aa12.16□□□□□ -0.46
PNKP-228ENST00000637325 TGFBR3Q03167 851 aa12.16□□□□□ -0.46
PNKP-228ENST00000637325 BSPH1Q075Z2 132 aa12.16□□□□□ -0.46
PNKP-228ENST00000637325 DMTNQ08495 405 aa12.16□□□□□ -0.46
PNKP-228ENST00000637325 MAPRE2Q15555 327 aa12.16□□□□□ -0.46
PNKP-228ENST00000637325 OR1Q1Q15612 314 aa12.16□□□□□ -0.46
PNKP-228ENST00000637325 TRMT5Q32P41 509 aaKnown RBP12.16□□□□□ -0.46
PNKP-228ENST00000637325 Q5PR19 223 aa12.16□□□□□ -0.46
PNKP-228ENST00000637325 TSPO2Q5TGU0 170 aa12.16□□□□□ -0.46
PNKP-228ENST00000637325 FAM91A1Q658Y4 838 aa12.16□□□□□ -0.46
PNKP-228ENST00000637325 KLHL17Q6TDP4 642 aa12.16□□□□□ -0.46
PNKP-228ENST00000637325 C5orf46Q6UWT4 87 aa12.16□□□□□ -0.46
PNKP-228ENST00000637325 C6orf89Q6UWU4 347 aa12.16□□□□□ -0.46
PNKP-228ENST00000637325 ABHD12BQ7Z5M8 362 aaPredicted RBP12.16□□□□□ -0.46
PNKP-228ENST00000637325 COMTD1Q86VU5 262 aa12.16□□□□□ -0.46
PNKP-228ENST00000637325 ZNF611Q8N823 705 aa12.16□□□□□ -0.46
PNKP-228ENST00000637325 POMGNT2Q8NAT1 580 aa12.16□□□□□ -0.46
PNKP-228ENST00000637325 KTI12Q96EK9 354 aaPredicted RBP12.16□□□□□ -0.46
PNKP-228ENST00000637325 ZNF385AQ96PM9 386 aaKnown RBP12.16□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms