RNA–Protein interactions for RNA: ENST00000637053.1

VIM-210, Transcript of vimentin, humanhuman

TSL 2

Gene VIM, Length 508 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIM-210ENST00000637053 TBXA2RP21731 343 aa2.7□□□□□ -1.98
VIM-210ENST00000637053 BCKDHBP21953 392 aa2.7□□□□□ -1.98
VIM-210ENST00000637053 CD38P28907 300 aa2.7□□□□□ -1.98
VIM-210ENST00000637053 CD1CP29017 333 aa2.7□□□□□ -1.98
VIM-210ENST00000637053 GNRHRP30968 328 aa2.7□□□□□ -1.98
VIM-210ENST00000637053 CCR7P32248 378 aa2.7□□□□□ -1.98
VIM-210ENST00000637053 RCVRNP35243 200 aa2.7□□□□□ -1.98
VIM-210ENST00000637053 DDOSTP39656 456 aa2.7□□□□□ -1.98
VIM-210ENST00000637053 MATKP42679 507 aa2.7□□□□□ -1.98
VIM-210ENST00000637053 RBM34P42696 430 aaKnown RBP2.7□□□□□ -1.98
VIM-210ENST00000637053 BRCC3P46736 316 aa2.7□□□□□ -1.98
VIM-210ENST00000637053 YAP1P46937 504 aaKnown RBP2.7□□□□□ -1.98
VIM-210ENST00000637053 PRLHRP49683 370 aa2.7□□□□□ -1.98
VIM-210ENST00000637053 PPOXP50336 477 aa2.7□□□□□ -1.98
VIM-210ENST00000637053 NOVA1P51513 510 aaKnown RBP2.7□□□□□ -1.98
VIM-210ENST00000637053 NR0B1P51843 470 aaKnown RBP2.7□□□□□ -1.98
VIM-210ENST00000637053 ADPRHP54922 357 aa2.7□□□□□ -1.98
VIM-210ENST00000637053 GEMP55040 296 aa2.7□□□□□ -1.98
VIM-210ENST00000637053 VSX2P58304 361 aaPredicted RBP2.7□□□□□ -1.98
VIM-210ENST00000637053 IL13RA1P78552 427 aa2.7□□□□□ -1.98
VIM-210ENST00000637053 HPCAP84074 193 aa2.7□□□□□ -1.98
VIM-210ENST00000637053 ZXDBP98169 803 aa2.7□□□□□ -1.98
VIM-210ENST00000637053 SEMG2Q02383 582 aa2.7□□□□□ -1.98
VIM-210ENST00000637053 HGFACQ04756 655 aa2.7□□□□□ -1.98
VIM-210ENST00000637053 FPGSQ05932 587 aa2.7□□□□□ -1.98
VIM-210ENST00000637053 KLRC3Q07444 240 aa2.7□□□□□ -1.98
VIM-210ENST00000637053 CRHR2Q13324 411 aa2.7□□□□□ -1.98
VIM-210ENST00000637053 APOFQ13790 326 aa2.7□□□□□ -1.98
VIM-210ENST00000637053 GRB7Q14451 532 aa2.7□□□□□ -1.98
VIM-210ENST00000637053 TMEM132DQ14C87 1099 aa2.7□□□□□ -1.98
VIM-210ENST00000637053 CCDC6Q16204 474 aa2.7□□□□□ -1.98
VIM-210ENST00000637053 CYP1B1Q16678 543 aa2.7□□□□□ -1.98
VIM-210ENST00000637053 PGGHGQ32M88 737 aa2.7□□□□□ -1.98
VIM-210ENST00000637053 PDZD11Q5EBL8 140 aa2.7□□□□□ -1.98
VIM-210ENST00000637053 LY6G6FQ5SQ64 297 aa2.7□□□□□ -1.98
VIM-210ENST00000637053 PRAMEF17Q5VTA0 474 aa2.7□□□□□ -1.98
VIM-210ENST00000637053 C9orf135Q5VTT2 229 aa2.7□□□□□ -1.98
VIM-210ENST00000637053 LYPLAL1Q5VWZ2 237 aa2.7□□□□□ -1.98
VIM-210ENST00000637053 SAXO2Q658L1 398 aa2.7□□□□□ -1.98
VIM-210ENST00000637053 HIST2H2AA3Q6FI13 130 aa2.7□□□□□ -1.98
VIM-210ENST00000637053 C22orf42Q6IC83 251 aa2.7□□□□□ -1.98
VIM-210ENST00000637053 RGMBQ6NW40 437 aa2.7□□□□□ -1.98
VIM-210ENST00000637053 ZNF790Q6PG37 636 aa2.7□□□□□ -1.98
VIM-210ENST00000637053 DHRS4L2Q6PKH6 230 aa2.7□□□□□ -1.98
VIM-210ENST00000637053 LCLAT1Q6UWP7 414 aa2.7□□□□□ -1.98
VIM-210ENST00000637053 DRAM2Q6UX65 266 aa2.7□□□□□ -1.98
VIM-210ENST00000637053 Q6ZNX1 250 aa2.7□□□□□ -1.98
VIM-210ENST00000637053 SH2D5Q6ZV89 423 aa2.7□□□□□ -1.98
VIM-210ENST00000637053 COX15Q7KZN9 410 aa2.7□□□□□ -1.98
VIM-210ENST00000637053 SSX7Q7RTT5 188 aa2.7□□□□□ -1.98
VIM-210ENST00000637053 TRMT1LQ7Z2T5 733 aaKnown RBP2.7□□□□□ -1.98
VIM-210ENST00000637053 CPEB2Q7Z5Q1 589 aaKnown RBP2.7□□□□□ -1.98
VIM-210ENST00000637053 CTU1Q7Z7A3 348 aaKnown RBP2.7□□□□□ -1.98
VIM-210ENST00000637053 TMPRSS11BQ86T26 416 aa2.7□□□□□ -1.98
VIM-210ENST00000637053 TMEM135Q86UB9 458 aa2.7□□□□□ -1.98
VIM-210ENST00000637053 NOXA1Q86UR1 476 aa2.7□□□□□ -1.98
VIM-210ENST00000637053 AMIGO1Q86WK6 493 aa2.7□□□□□ -1.98
VIM-210ENST00000637053 XYLT1Q86Y38 959 aa2.7□□□□□ -1.98
VIM-210ENST00000637053 MARCH9Q86YJ5 346 aa2.7□□□□□ -1.98
VIM-210ENST00000637053 ERI1Q8IV48 349 aaKnown RBP2.7□□□□□ -1.98
VIM-210ENST00000637053 RIMKLAQ8IXN7 391 aa2.7□□□□□ -1.98
VIM-210ENST00000637053 SPATA6LQ8N4H0 392 aa2.7□□□□□ -1.98
VIM-210ENST00000637053 CLDN22Q8N7P3 220 aa2.7□□□□□ -1.98
VIM-210ENST00000637053 POC1AQ8NBT0 407 aa2.7□□□□□ -1.98
VIM-210ENST00000637053 FAM98AQ8NCA5 519 aaKnown RBP2.7□□□□□ -1.98
VIM-210ENST00000637053 LFNGQ8NES3 379 aa2.7□□□□□ -1.98
VIM-210ENST00000637053 SEMA6DQ8NFY4 1073 aa2.7□□□□□ -1.98
VIM-210ENST00000637053 OR10X1Q8NGY0 326 aa2.7□□□□□ -1.98
VIM-210ENST00000637053 OR51A7Q8NH64 312 aa2.7□□□□□ -1.98
VIM-210ENST00000637053 STOML3Q8TAV4 291 aa2.7□□□□□ -1.98
VIM-210ENST00000637053 MAGEE2Q8TD90 523 aaPredicted RBP2.7□□□□□ -1.98
VIM-210ENST00000637053 RNASEH2CQ8TDP1 164 aaKnown RBP2.7□□□□□ -1.98
VIM-210ENST00000637053 TMEM170AQ8WVE7 144 aa2.7□□□□□ -1.98
VIM-210ENST00000637053 ASB10Q8WXI3 467 aa2.7□□□□□ -1.98
VIM-210ENST00000637053 TCEAL3Q969E4 200 aa2.7□□□□□ -1.98
VIM-210ENST00000637053 EME1Q96AY2 570 aa2.7□□□□□ -1.98
VIM-210ENST00000637053 FAF2Q96CS3 445 aa2.7□□□□□ -1.98
VIM-210ENST00000637053 NXPE2Q96DL1 559 aa2.7□□□□□ -1.98
VIM-210ENST00000637053 POM121L2Q96KW2 1035 aa2.7□□□□□ -1.98
VIM-210ENST00000637053 OR6C1Q96RD1 312 aa2.7□□□□□ -1.98
VIM-210ENST00000637053 ERGIC2Q96RQ1 377 aa2.7□□□□□ -1.98
VIM-210ENST00000637053 MBOAT4Q96T53 435 aa2.7□□□□□ -1.98
VIM-210ENST00000637053 FMO2Q99518 471 aa2.7□□□□□ -1.98
VIM-210ENST00000637053 ECSITQ9BQ95 431 aa2.7□□□□□ -1.98
VIM-210ENST00000637053 PTDSS2Q9BVG9 487 aa2.7□□□□□ -1.98
VIM-210ENST00000637053 KRTAP1-5Q9BYS1 174 aa2.7□□□□□ -1.98
VIM-210ENST00000637053 SLC2A11Q9BYW1 496 aa2.7□□□□□ -1.98
VIM-210ENST00000637053 UBXN6Q9BZV1 441 aa2.7□□□□□ -1.98
VIM-210ENST00000637053 TM6SF1Q9BZW5 370 aa2.7□□□□□ -1.98
VIM-210ENST00000637053 ELOVL4Q9GZR5 314 aa2.7□□□□□ -1.98
VIM-210ENST00000637053 CCDC90BQ9GZT6 254 aa2.7□□□□□ -1.98
VIM-210ENST00000637053 NEUROG2Q9H2A3 272 aa2.7□□□□□ -1.98
VIM-210ENST00000637053 DPAGT1Q9H3H5 408 aa2.7□□□□□ -1.98
VIM-210ENST00000637053 R3HDMLQ9H3Y0 253 aa2.7□□□□□ -1.98
VIM-210ENST00000637053 TUBB1Q9H4B7 451 aa2.7□□□□□ -1.98
VIM-210ENST00000637053 RNF41Q9H4P4 317 aaPredicted RBP2.7□□□□□ -1.98
VIM-210ENST00000637053 TMEM38AQ9H6F2 299 aa2.7□□□□□ -1.98
VIM-210ENST00000637053 WDR41Q9HAD4 459 aa2.7□□□□□ -1.98
VIM-210ENST00000637053 SAP30LQ9HAJ7 183 aa2.7□□□□□ -1.98
VIM-210ENST00000637053 SPAG4Q9NPE6 437 aa2.7□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms