RNA–Protein interactions for RNA: ENST00000637038.1

SCN1A-214, Transcript of sodium voltage-gated channel alpha subunit 1, humanhuman

TSL 5

Gene SCN1A, Length 4,268 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1A-214ENST00000637038 TMPRSS11FQ6ZWK6 438 aa3.67□□□□□ -1.82
SCN1A-214ENST00000637038 MAMDC2Q7Z304 686 aaPredicted RBP3.67□□□□□ -1.82
SCN1A-214ENST00000637038 HMGN2P46Q86SG4 172 aa3.67□□□□□ -1.82
SCN1A-214ENST00000637038 ZNF227Q86WZ6 799 aa3.67□□□□□ -1.82
SCN1A-214ENST00000637038 NAXDQ8IW45 347 aa3.67□□□□□ -1.82
SCN1A-214ENST00000637038 TIGD4Q8IY51 512 aa3.67□□□□□ -1.82
SCN1A-214ENST00000637038 CCDC36Q8IYA8 594 aa3.67□□□□□ -1.82
SCN1A-214ENST00000637038 C10orf53Q8N6V4 93 aa3.67□□□□□ -1.82
SCN1A-214ENST00000637038 OR2A1Q8NGT9 310 aa3.67□□□□□ -1.82
SCN1A-214ENST00000637038 MOSPD2Q8NHP6 518 aa3.67□□□□□ -1.82
SCN1A-214ENST00000637038 ADAMTS18Q8TE60 1221 aa3.67□□□□□ -1.82
SCN1A-214ENST00000637038 THAP4Q8WY91 577 aa3.67□□□□□ -1.82
SCN1A-214ENST00000637038 HGDQ93099 445 aa3.67□□□□□ -1.82
SCN1A-214ENST00000637038 MNTQ99583 582 aa3.67□□□□□ -1.82
SCN1A-214ENST00000637038 TEAD3Q99594 435 aa3.67□□□□□ -1.82
SCN1A-214ENST00000637038 G6PC3Q9BUM1 346 aa3.67□□□□□ -1.82
SCN1A-214ENST00000637038 SARGQ9BW04 601 aa3.67□□□□□ -1.82
SCN1A-214ENST00000637038 PRDM7Q9NQW5 492 aa3.67□□□□□ -1.82
SCN1A-214ENST00000637038 TAS2R10Q9NYW0 307 aa3.67□□□□□ -1.82
SCN1A-214ENST00000637038 GNG8Q9UK08 70 aa3.67□□□□□ -1.82
SCN1A-214ENST00000637038 C19orf53Q9UNZ5 99 aaPredicted RBP3.67□□□□□ -1.82
SCN1A-214ENST00000637038 TRIOO75962 3097 aa3.67□□□□□ -1.82
SCN1A-214ENST00000637038 A0A1W2PRG6 482 aa3.67□□□□□ -1.82
SCN1A-214ENST00000637038 PHYHO14832 338 aa3.67□□□□□ -1.82
SCN1A-214ENST00000637038 ZNF749O43361 778 aa3.67□□□□□ -1.82
SCN1A-214ENST00000637038 LCMT2O60294 686 aaKnown RBP3.67□□□□□ -1.82
SCN1A-214ENST00000637038 IL33O95760 270 aa3.67□□□□□ -1.82
SCN1A-214ENST00000637038 PDGFAP04085 211 aa3.67□□□□□ -1.82
SCN1A-214ENST00000637038 EIF4EP06730 217 aaKnown RBP3.67□□□□□ -1.82
SCN1A-214ENST00000637038 MRPL3P09001 348 aaKnown RBP3.67□□□□□ -1.82
SCN1A-214ENST00000637038 FTH1P19P0C7X4 201 aa3.67□□□□□ -1.82
SCN1A-214ENST00000637038 HPGDP15428 266 aa3.67□□□□□ -1.82
SCN1A-214ENST00000637038 TYRP1P17643 537 aa3.67□□□□□ -1.82
SCN1A-214ENST00000637038 MAT2AP31153 395 aaKnown RBP3.67□□□□□ -1.82
SCN1A-214ENST00000637038 PTGS2P35354 604 aa3.67□□□□□ -1.82
SCN1A-214ENST00000637038 ACVR1BP36896 505 aa3.67□□□□□ -1.82
SCN1A-214ENST00000637038 RPE65Q16518 533 aa3.67□□□□□ -1.82
SCN1A-214ENST00000637038 CLLU1Q5K131 121 aa3.67□□□□□ -1.82
SCN1A-214ENST00000637038 ELFN2Q5R3F8 820 aa3.67□□□□□ -1.82
SCN1A-214ENST00000637038 MANEAQ5SRI9 462 aa3.67□□□□□ -1.82
SCN1A-214ENST00000637038 MRPL2Q5T653 305 aaKnown RBP3.67□□□□□ -1.82
SCN1A-214ENST00000637038 C11orf88Q6PI97 169 aa3.67□□□□□ -1.82
SCN1A-214ENST00000637038 ZNF793Q6ZN11 406 aa3.67□□□□□ -1.82
SCN1A-214ENST00000637038 FRRS1Q6ZNA5 592 aa3.67□□□□□ -1.82
SCN1A-214ENST00000637038 SYT13Q7L8C5 426 aa3.67□□□□□ -1.82
SCN1A-214ENST00000637038 TIPARPQ7Z3E1 657 aaKnown RBP3.67□□□□□ -1.82
SCN1A-214ENST00000637038 SLC51BQ86UW2 128 aa3.67□□□□□ -1.82
SCN1A-214ENST00000637038 C12orf40Q86WS4 652 aa3.67□□□□□ -1.82
SCN1A-214ENST00000637038 SIAH3Q8IW03 269 aa3.67□□□□□ -1.82
SCN1A-214ENST00000637038 CMIPQ8IY22 773 aa3.67□□□□□ -1.82
SCN1A-214ENST00000637038 ZNF843Q8N446 348 aa3.67□□□□□ -1.82
SCN1A-214ENST00000637038 C9orf62Q8N4C0 152 aa3.67□□□□□ -1.82
SCN1A-214ENST00000637038 ZNF433Q8N7K0 673 aaPredicted RBP3.67□□□□□ -1.82
SCN1A-214ENST00000637038 TMEM99Q8N816 258 aa3.67□□□□□ -1.82
SCN1A-214ENST00000637038 ZNF527Q8NB42 609 aa3.67□□□□□ -1.82
SCN1A-214ENST00000637038 OR6C4Q8NGE1 309 aa3.67□□□□□ -1.82
SCN1A-214ENST00000637038 OR2T35Q8NGX2 323 aa3.67□□□□□ -1.82
SCN1A-214ENST00000637038 ZCCHC10Q8TBK6 192 aa3.67□□□□□ -1.82
SCN1A-214ENST00000637038 SMIM4Q8WVI0 70 aa3.67□□□□□ -1.82
SCN1A-214ENST00000637038 SLC35A4Q96G79 324 aa3.67□□□□□ -1.82
SCN1A-214ENST00000637038 SCMH1Q96GD3 660 aa3.67□□□□□ -1.82
SCN1A-214ENST00000637038 GPR137Q96N19 417 aa3.67□□□□□ -1.82
SCN1A-214ENST00000637038 DPCDQ9BVM2 203 aaPredicted RBP3.67□□□□□ -1.82
SCN1A-214ENST00000637038 GHITMQ9H3K2 345 aa3.67□□□□□ -1.82
SCN1A-214ENST00000637038 TRPV4Q9HBA0 871 aa3.67□□□□□ -1.82
SCN1A-214ENST00000637038 THAP10Q9P2Z0 257 aaPredicted RBP3.67□□□□□ -1.82
SCN1A-214ENST00000637038 KCNN3Q9UGI6 736 aa3.67□□□□□ -1.82
SCN1A-214ENST00000637038 CLEC4AQ9UMR7 237 aa3.67□□□□□ -1.82
SCN1A-214ENST00000637038 ENTPD2Q9Y5L3 495 aa3.67□□□□□ -1.82
SCN1A-214ENST00000637038 TP53BP1Q12888 1972 aaPredicted RBP3.67□□□□□ -1.82
SCN1A-214ENST00000637038 ADAMTS20P59510 1910 aa3.67□□□□□ -1.82
SCN1A-214ENST00000637038 MEIKINA0A087WXM9 373 aa3.67□□□□□ -1.82
SCN1A-214ENST00000637038 A0A1B0GUH1 482 aa3.67□□□□□ -1.82
SCN1A-214ENST00000637038 A0A1W2PPV9 198 aa3.67□□□□□ -1.82
SCN1A-214ENST00000637038 TRABD2BA6NFA1 517 aa3.67□□□□□ -1.82
SCN1A-214ENST00000637038 ANXA2P2A6NMY6 339 aa3.67□□□□□ -1.82
SCN1A-214ENST00000637038 SHOXO15266 292 aa3.67□□□□□ -1.82
SCN1A-214ENST00000637038 MID1O15344 667 aa3.67□□□□□ -1.82
SCN1A-214ENST00000637038 B4GALT2O60909 372 aa3.67□□□□□ -1.82
SCN1A-214ENST00000637038 RP2O75695 350 aa3.67□□□□□ -1.82
SCN1A-214ENST00000637038 PPP1R3DO95685 299 aa3.67□□□□□ -1.82
SCN1A-214ENST00000637038 TGM6O95932 706 aa3.67□□□□□ -1.82
SCN1A-214ENST00000637038 IFNA2P01563 188 aa3.67□□□□□ -1.82
SCN1A-214ENST00000637038 HIST1H2ABP04908 130 aa3.67□□□□□ -1.82
SCN1A-214ENST00000637038 ATP1B1P05026 303 aa3.67□□□□□ -1.82
SCN1A-214ENST00000637038 ANXA2P07355 339 aaKnown RBP3.67□□□□□ -1.82
SCN1A-214ENST00000637038 GIPP09681 153 aaPredicted RBP3.67□□□□□ -1.82
SCN1A-214ENST00000637038 PSMB1P20618 241 aaKnown RBP3.67□□□□□ -1.82
SCN1A-214ENST00000637038 VAMP1P23763 118 aa3.67□□□□□ -1.82
SCN1A-214ENST00000637038 SSTR2P30874 369 aa3.67□□□□□ -1.82
SCN1A-214ENST00000637038 ART1P52961 327 aa3.67□□□□□ -1.82
SCN1A-214ENST00000637038 PRPS1P60891 318 aa3.67□□□□□ -1.82
SCN1A-214ENST00000637038 PSMA6P60900 246 aaKnown RBP3.67□□□□□ -1.82
SCN1A-214ENST00000637038 SIRPAP78324 504 aa3.67□□□□□ -1.82
SCN1A-214ENST00000637038 GPLD1P80108 840 aa3.67□□□□□ -1.82
SCN1A-214ENST00000637038 BAMBIQ13145 260 aa3.67□□□□□ -1.82
SCN1A-214ENST00000637038 GRK1Q15835 563 aa3.67□□□□□ -1.82
SCN1A-214ENST00000637038 RNASE12Q5GAN4 147 aaKnown RBP3.67□□□□□ -1.82
SCN1A-214ENST00000637038 C18orf63Q68DL7 685 aa3.67□□□□□ -1.82
SCN1A-214ENST00000637038 LIN54Q6MZP7 749 aa3.67□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms