RNA–Protein interactions for RNA: ENST00000636194.1

SCN1A-212, Transcript of sodium voltage-gated channel alpha subunit 1, humanhuman

TSL 5

Gene SCN1A, Length 8,508 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1A-212ENST00000636194 ALOX15BO15296 676 aa5.65□□□□□ -1.51
SCN1A-212ENST00000636194 TGOLN2O43493 480 aa5.65□□□□□ -1.51
SCN1A-212ENST00000636194 GALR2O43603 387 aaPredicted RBP5.65□□□□□ -1.51
SCN1A-212ENST00000636194 CREG1O75629 220 aa5.65□□□□□ -1.51
SCN1A-212ENST00000636194 MPIG6BO95866 241 aa5.65□□□□□ -1.51
SCN1A-212ENST00000636194 LIPCP11150 499 aa5.65□□□□□ -1.51
SCN1A-212ENST00000636194 POLR2CP19387 275 aaPredicted RBP5.65□□□□□ -1.51
SCN1A-212ENST00000636194 EFNA1P20827 205 aaPredicted RBP5.65□□□□□ -1.51
SCN1A-212ENST00000636194 BLVRBP30043 206 aaPredicted RBP5.65□□□□□ -1.51
SCN1A-212ENST00000636194 MFAP4P55083 255 aa5.65□□□□□ -1.51
SCN1A-212ENST00000636194 OR10A3P58181 314 aa5.65□□□□□ -1.51
SCN1A-212ENST00000636194 ZNF154Q13106 437 aa5.65□□□□□ -1.51
SCN1A-212ENST00000636194 TTC32Q5I0X7 151 aa5.65□□□□□ -1.51
SCN1A-212ENST00000636194 UBAC2Q8NBM4 344 aa5.65□□□□□ -1.51
SCN1A-212ENST00000636194 LINC00116Q8NCU8 138 aa5.65□□□□□ -1.51
SCN1A-212ENST00000636194 HUS1BQ8NHY5 278 aa5.65□□□□□ -1.51
SCN1A-212ENST00000636194 LINC01599Q8WXQ3 324 aa5.65□□□□□ -1.51
SCN1A-212ENST00000636194 DPF2Q92785 391 aa5.65□□□□□ -1.51
SCN1A-212ENST00000636194 SFRP2Q96HF1 295 aa5.65□□□□□ -1.51
SCN1A-212ENST00000636194 TRIB3Q96RU7 358 aa5.65□□□□□ -1.51
SCN1A-212ENST00000636194 CGREF1Q99674 301 aa5.65□□□□□ -1.51
SCN1A-212ENST00000636194 SLC29A1Q99808 456 aa5.65□□□□□ -1.51
SCN1A-212ENST00000636194 SEMA6BQ9H3T3 888 aa5.65□□□□□ -1.51
SCN1A-212ENST00000636194 NOX3Q9HBY0 568 aa5.65□□□□□ -1.51
SCN1A-212ENST00000636194 IGSF9Q9P2J2 1179 aa5.65□□□□□ -1.51
SCN1A-212ENST00000636194 PTPRMP28827 1452 aa5.65□□□□□ -1.51
SCN1A-212ENST00000636194 ZNF816-ZNF321PA0A0X1KG74 233 aa5.64□□□□□ -1.51
SCN1A-212ENST00000636194 A0A1W2PP18 115 aa5.64□□□□□ -1.51
SCN1A-212ENST00000636194 MEIS3P2A8K0S8 358 aa5.64□□□□□ -1.51
SCN1A-212ENST00000636194 SYT5O00445 386 aa5.64□□□□□ -1.51
SCN1A-212ENST00000636194 FAM189A1O60320 539 aa5.64□□□□□ -1.51
SCN1A-212ENST00000636194 SLITRK3O94933 977 aa5.64□□□□□ -1.51
SCN1A-212ENST00000636194 OR5G3P0C626 314 aa5.64□□□□□ -1.51
SCN1A-212ENST00000636194 STAG3L3P0CL85 134 aa5.64□□□□□ -1.51
SCN1A-212ENST00000636194 FCGR2AP12318 317 aa5.64□□□□□ -1.51
SCN1A-212ENST00000636194 GDF1P27539 372 aa5.64□□□□□ -1.51
SCN1A-212ENST00000636194 EVI2BP34910 448 aa5.64□□□□□ -1.51
SCN1A-212ENST00000636194 OR3A1P47881 315 aa5.64□□□□□ -1.51
SCN1A-212ENST00000636194 MTNR1AP48039 350 aa5.64□□□□□ -1.51
SCN1A-212ENST00000636194 TGM4P49221 684 aa5.64□□□□□ -1.51
SCN1A-212ENST00000636194 SGSHP51688 502 aa5.64□□□□□ -1.51
SCN1A-212ENST00000636194 PPP1R3AQ16821 1122 aa5.64□□□□□ -1.51
SCN1A-212ENST00000636194 ZNF805Q5CZA5 627 aa5.64□□□□□ -1.51
SCN1A-212ENST00000636194 LPCAT4Q643R3 524 aa5.64□□□□□ -1.51
SCN1A-212ENST00000636194 TMUB2Q71RG4 321 aa5.64□□□□□ -1.51
SCN1A-212ENST00000636194 WDR20Q8TBZ3 569 aa5.64□□□□□ -1.51
SCN1A-212ENST00000636194 MADDQ8WXG6 1647 aa5.64□□□□□ -1.51
SCN1A-212ENST00000636194 MS4A4EQ96PG1 132 aa5.64□□□□□ -1.51
SCN1A-212ENST00000636194 FAAP24Q9BTP7 215 aa5.64□□□□□ -1.51
SCN1A-212ENST00000636194 GLIS2Q9BZE0 524 aaPredicted RBP5.64□□□□□ -1.51
SCN1A-212ENST00000636194 OXSMQ9NWU1 459 aa5.64□□□□□ -1.51
SCN1A-212ENST00000636194 DLGAP4Q9Y2H0 992 aa5.64□□□□□ -1.51
SCN1A-212ENST00000636194 TULP4Q9NRJ4 1543 aa5.64□□□□□ -1.51
SCN1A-212ENST00000636194 PRAMEF27A3QJZ7 478 aa5.64□□□□□ -1.51
SCN1A-212ENST00000636194 CDC14CA4D256 554 aa5.64□□□□□ -1.51
SCN1A-212ENST00000636194 ZNF324O75467 553 aaPredicted RBP5.64□□□□□ -1.51
SCN1A-212ENST00000636194 GJA4P35212 333 aa5.64□□□□□ -1.51
SCN1A-212ENST00000636194 LCN6P62502 163 aa5.64□□□□□ -1.51
SCN1A-212ENST00000636194 LTC4SQ16873 150 aa5.64□□□□□ -1.51
SCN1A-212ENST00000636194 PRAMEF9Q5VWM5 478 aa5.64□□□□□ -1.51
SCN1A-212ENST00000636194 HBMQ6B0K9 141 aa5.64□□□□□ -1.51
SCN1A-212ENST00000636194 MMP21Q8N119 569 aa5.64□□□□□ -1.51
SCN1A-212ENST00000636194 OR4D10Q8NGI6 311 aa5.64□□□□□ -1.51
SCN1A-212ENST00000636194 ACER1Q8TDN7 264 aa5.64□□□□□ -1.51
SCN1A-212ENST00000636194 LGALS12Q96DT0 336 aa5.64□□□□□ -1.51
SCN1A-212ENST00000636194 IP6K3Q96PC2 410 aa5.64□□□□□ -1.51
SCN1A-212ENST00000636194 STACQ99469 402 aa5.64□□□□□ -1.51
SCN1A-212ENST00000636194 RHOFQ9HBH0 211 aa5.64□□□□□ -1.51
SCN1A-212ENST00000636194 DNMT3BQ9UBC3 853 aaKnown RBP5.64□□□□□ -1.51
SCN1A-212ENST00000636194 MCM3APO60318 1980 aa5.64□□□□□ -1.51
SCN1A-212ENST00000636194 H3BML4 177 aa5.64□□□□□ -1.51
SCN1A-212ENST00000636194 SRPX2O60687 465 aaPredicted RBP5.64□□□□□ -1.51
SCN1A-212ENST00000636194 DHRS3O75911 302 aa5.64□□□□□ -1.51
SCN1A-212ENST00000636194 EBLN1P0CF75 366 aa5.64□□□□□ -1.51
SCN1A-212ENST00000636194 MYBPHQ13203 477 aa5.64□□□□□ -1.51
SCN1A-212ENST00000636194 TMEM151AQ8N4L1 468 aa5.64□□□□□ -1.51
SCN1A-212ENST00000636194 NDRG1Q92597 394 aaKnown RBP5.64□□□□□ -1.51
SCN1A-212ENST00000636194 SERINC2Q96SA4 455 aa5.64□□□□□ -1.51
SCN1A-212ENST00000636194 COQ10BQ9H8M1 238 aa5.64□□□□□ -1.51
SCN1A-212ENST00000636194 MARCH5Q9NX47 278 aa5.64□□□□□ -1.51
SCN1A-212ENST00000636194 OBP2AQ9NY56 170 aa5.64□□□□□ -1.51
SCN1A-212ENST00000636194 PISDQ9UG56 409 aa5.64□□□□□ -1.51
SCN1A-212ENST00000636194 PRRG2O14669 202 aa5.64□□□□□ -1.51
SCN1A-212ENST00000636194 LMX1BO60663 402 aa5.64□□□□□ -1.51
SCN1A-212ENST00000636194 CDK2AP2O75956 126 aa5.64□□□□□ -1.51
SCN1A-212ENST00000636194 RPLP1P05386 114 aaKnown RBP5.64□□□□□ -1.51
SCN1A-212ENST00000636194 KIR2DL1P43626 348 aaPredicted RBP5.64□□□□□ -1.51
SCN1A-212ENST00000636194 KIR2DL2P43627 348 aaPredicted RBP5.64□□□□□ -1.51
SCN1A-212ENST00000636194 C21orf58P58505 322 aa5.64□□□□□ -1.51
SCN1A-212ENST00000636194 APOFQ13790 326 aa5.64□□□□□ -1.51
SCN1A-212ENST00000636194 PXDC1Q5TGL8 231 aa5.64□□□□□ -1.51
SCN1A-212ENST00000636194 C5orf46Q6UWT4 87 aa5.64□□□□□ -1.51
SCN1A-212ENST00000636194 TIPARPQ7Z3E1 657 aaKnown RBP5.64□□□□□ -1.51
SCN1A-212ENST00000636194 CAMKMTQ7Z624 323 aa5.64□□□□□ -1.51
SCN1A-212ENST00000636194 MED12LQ86YW9 2145 aa5.64□□□□□ -1.51
SCN1A-212ENST00000636194 KDM8Q8N371 416 aa5.64□□□□□ -1.51
SCN1A-212ENST00000636194 OR52P1PQ8NH57 321 aa5.64□□□□□ -1.51
SCN1A-212ENST00000636194 HBEGFQ99075 208 aa5.64□□□□□ -1.51
SCN1A-212ENST00000636194 RTP3Q9BQQ7 232 aa5.64□□□□□ -1.51
SCN1A-212ENST00000636194 TP63Q9H3D4 680 aaPredicted RBP5.64□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms