RNA–Protein interactions for RNA: ENST00000628915.2

R3HDM1-220, Transcript of R3H domain containing 1, humanhuman

TSL 5 BASIC

Gene R3HDM1, Length 4,325 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-220ENST00000628915 A6NNC1 897 aa3.61□□□□□ -1.83
R3HDM1-220ENST00000628915 TP53I11O14683 189 aa3.61□□□□□ -1.83
R3HDM1-220ENST00000628915 ORC5O43913 435 aa3.61□□□□□ -1.83
R3HDM1-220ENST00000628915 TPST2O60704 377 aa3.61□□□□□ -1.83
R3HDM1-220ENST00000628915 RAB36O95755 333 aa3.61□□□□□ -1.83
R3HDM1-220ENST00000628915 GOT2P00505 430 aaKnown RBP3.61□□□□□ -1.83
R3HDM1-220ENST00000628915 RHOCP08134 193 aa3.61□□□□□ -1.83
R3HDM1-220ENST00000628915 RAB40ALP0C0E4 278 aa3.61□□□□□ -1.83
R3HDM1-220ENST00000628915 NR2F6P10588 404 aa3.61□□□□□ -1.83
R3HDM1-220ENST00000628915 ZNF30P17039 623 aa3.61□□□□□ -1.83
R3HDM1-220ENST00000628915 CMPK1P30085 196 aa3.61□□□□□ -1.83
R3HDM1-220ENST00000628915 RPL22P35268 128 aaKnown RBP3.61□□□□□ -1.83
R3HDM1-220ENST00000628915 LIPAP38571 399 aa3.61□□□□□ -1.83
R3HDM1-220ENST00000628915 SOX2P48431 317 aa3.61□□□□□ -1.83
R3HDM1-220ENST00000628915 CYP2J2P51589 502 aa3.61□□□□□ -1.83
R3HDM1-220ENST00000628915 SUOXP51687 545 aa3.61□□□□□ -1.83
R3HDM1-220ENST00000628915 ELLP55199 621 aaPredicted RBP3.61□□□□□ -1.83
R3HDM1-220ENST00000628915 SLBPQ14493 270 aaKnown RBP eCLIP3.61□□□□□ -1.83
R3HDM1-220ENST00000628915 ADPRMQ3LIE5 342 aa3.61□□□□□ -1.83
R3HDM1-220ENST00000628915 ACSM3Q53FZ2 586 aa3.61□□□□□ -1.83
R3HDM1-220ENST00000628915 NKAPLQ5M9Q1 402 aa3.61□□□□□ -1.83
R3HDM1-220ENST00000628915 TMEM236Q5W0B7 351 aa3.61□□□□□ -1.83
R3HDM1-220ENST00000628915 FRMPD2BQ6IN97 320 aa3.61□□□□□ -1.83
R3HDM1-220ENST00000628915 TEX261Q6UWH6 196 aa3.61□□□□□ -1.83
R3HDM1-220ENST00000628915 LCLAT1Q6UWP7 414 aa3.61□□□□□ -1.83
R3HDM1-220ENST00000628915 AHSA2Q719I0 299 aa3.61□□□□□ -1.83
R3HDM1-220ENST00000628915 PTAR1Q7Z6K3 402 aaPredicted RBP3.61□□□□□ -1.83
R3HDM1-220ENST00000628915 GLB1L2Q8IW92 636 aa3.61□□□□□ -1.83
R3HDM1-220ENST00000628915 MUC15Q8N387 334 aa3.61□□□□□ -1.83
R3HDM1-220ENST00000628915 AQP11Q8NBQ7 271 aa3.61□□□□□ -1.83
R3HDM1-220ENST00000628915 OR2T11Q8NH01 316 aa3.61□□□□□ -1.83
R3HDM1-220ENST00000628915 SLC7A13Q8TCU3 470 aa3.61□□□□□ -1.83
R3HDM1-220ENST00000628915 ITCHQ96J02 903 aa3.61□□□□□ -1.83
R3HDM1-220ENST00000628915 LINC00615Q96LM1 132 aaPredicted RBP3.61□□□□□ -1.83
R3HDM1-220ENST00000628915 MUS81Q96NY9 551 aa3.61□□□□□ -1.83
R3HDM1-220ENST00000628915 G6PC3Q9BUM1 346 aa3.61□□□□□ -1.83
R3HDM1-220ENST00000628915 DCSTAMPQ9H295 470 aa3.61□□□□□ -1.83
R3HDM1-220ENST00000628915 BCAS3Q9H6U6 928 aa3.61□□□□□ -1.83
R3HDM1-220ENST00000628915 RRAGCQ9HB90 399 aa3.61□□□□□ -1.83
R3HDM1-220ENST00000628915 PLEKHJ1Q9NW61 149 aa3.61□□□□□ -1.83
R3HDM1-220ENST00000628915 SPG21Q9NZD8 308 aa3.61□□□□□ -1.83
R3HDM1-220ENST00000628915 EPHA6Q9UF33 1036 aa3.61□□□□□ -1.83
R3HDM1-220ENST00000628915 SS18L2Q9UHA2 77 aa3.61□□□□□ -1.83
R3HDM1-220ENST00000628915 SLCO3A1Q9UIG8 710 aa3.61□□□□□ -1.83
R3HDM1-220ENST00000628915 SLC25A13Q9UJS0 675 aa3.61□□□□□ -1.83
R3HDM1-220ENST00000628915 ZNRF3Q9ULT6 936 aa3.61□□□□□ -1.83
R3HDM1-220ENST00000628915 MEMO1Q9Y316 297 aa3.61□□□□□ -1.83
R3HDM1-220ENST00000628915 U3KQ87 197 aa3.61□□□□□ -1.83
R3HDM1-220ENST00000628915 TCRBV16S1A1N1A0A5B0 115 aa3.61□□□□□ -1.83
R3HDM1-220ENST00000628915 FAM74A7A6NL05 159 aa3.61□□□□□ -1.83
R3HDM1-220ENST00000628915 ANHXE9PGG2 379 aa3.61□□□□□ -1.83
R3HDM1-220ENST00000628915 IMPA2O14732 288 aa3.61□□□□□ -1.83
R3HDM1-220ENST00000628915 SLC16A5O15375 505 aa3.61□□□□□ -1.83
R3HDM1-220ENST00000628915 TGFB1I1O43294 461 aa3.61□□□□□ -1.83
R3HDM1-220ENST00000628915 DFFBO76075 338 aa3.61□□□□□ -1.83
R3HDM1-220ENST00000628915 DDNO94850 711 aaPredicted RBP3.61□□□□□ -1.83
R3HDM1-220ENST00000628915 CXCL14O95715 111 aa3.61□□□□□ -1.83
R3HDM1-220ENST00000628915 IGHA2P01877 340 aa3.61□□□□□ -1.83
R3HDM1-220ENST00000628915 COL1A1P02452 1464 aaPredicted RBP3.61□□□□□ -1.83
R3HDM1-220ENST00000628915 AHSGP02765 367 aa3.61□□□□□ -1.83
R3HDM1-220ENST00000628915 HIST1H1BP16401 226 aaKnown RBP3.61□□□□□ -1.83
R3HDM1-220ENST00000628915 TFE3P19532 575 aaPredicted RBP3.61□□□□□ -1.83
R3HDM1-220ENST00000628915 KDELR1P24390 212 aa3.61□□□□□ -1.83
R3HDM1-220ENST00000628915 F2RP25116 425 aa3.61□□□□□ -1.83
R3HDM1-220ENST00000628915 GKP32189 559 aa3.61□□□□□ -1.83
R3HDM1-220ENST00000628915 PMELP40967 661 aa3.61□□□□□ -1.83
R3HDM1-220ENST00000628915 SOX8P57073 446 aa3.61□□□□□ -1.83
R3HDM1-220ENST00000628915 NKX6-1P78426 367 aaPredicted RBP3.61□□□□□ -1.83
R3HDM1-220ENST00000628915 HSF1Q00613 529 aa3.61□□□□□ -1.83
R3HDM1-220ENST00000628915 HTR4Q13639 388 aa3.61□□□□□ -1.83
R3HDM1-220ENST00000628915 PCLAFQ15004 111 aa3.61□□□□□ -1.83
R3HDM1-220ENST00000628915 FAM74A3Q4VXF1 159 aa3.61□□□□□ -1.83
R3HDM1-220ENST00000628915 SPATA31A5Q5VU36 1347 aa3.61□□□□□ -1.83
R3HDM1-220ENST00000628915 BLOC1S3Q6QNY0 202 aa3.61□□□□□ -1.83
R3HDM1-220ENST00000628915 ATRAIDQ6UW56 229 aa3.61□□□□□ -1.83
R3HDM1-220ENST00000628915 LANCL3Q6ZV70 420 aa3.61□□□□□ -1.83
R3HDM1-220ENST00000628915 CSMD2Q7Z408 3487 aa3.61□□□□□ -1.83
R3HDM1-220ENST00000628915 TSEN54Q7Z6J9 526 aaKnown RBP3.61□□□□□ -1.83
R3HDM1-220ENST00000628915 SPATA31A7Q8IWB4 1347 aa3.61□□□□□ -1.83
R3HDM1-220ENST00000628915 UEVLDQ8IX04 471 aa3.61□□□□□ -1.83
R3HDM1-220ENST00000628915 PARP16Q8N5Y8 322 aa3.61□□□□□ -1.83
R3HDM1-220ENST00000628915 OR56A1Q8NGH5 318 aa3.61□□□□□ -1.83
R3HDM1-220ENST00000628915 OR52N4Q8NGI2 321 aa3.61□□□□□ -1.83
R3HDM1-220ENST00000628915 OR5D13Q8NGL4 314 aa3.61□□□□□ -1.83
R3HDM1-220ENST00000628915 RNF133Q8WVZ7 376 aa3.61□□□□□ -1.83
R3HDM1-220ENST00000628915 NDRG1Q92597 394 aaKnown RBP3.61□□□□□ -1.83
R3HDM1-220ENST00000628915 PSMG2Q969U7 264 aa3.61□□□□□ -1.83
R3HDM1-220ENST00000628915 TMEM186Q96B77 213 aa3.61□□□□□ -1.83
R3HDM1-220ENST00000628915 RGMAQ96B86 450 aa3.61□□□□□ -1.83
R3HDM1-220ENST00000628915 ANKRD9Q96BM1 317 aaPredicted RBP3.61□□□□□ -1.83
R3HDM1-220ENST00000628915 OR52B2Q96RD2 323 aa3.61□□□□□ -1.83
R3HDM1-220ENST00000628915 GFM1Q96RP9 751 aaKnown RBP3.61□□□□□ -1.83
R3HDM1-220ENST00000628915 REEP2Q9BRK0 252 aa3.61□□□□□ -1.83
R3HDM1-220ENST00000628915 PCGF1Q9BSM1 259 aa3.61□□□□□ -1.83
R3HDM1-220ENST00000628915 C1orf43Q9BWL3 253 aa3.61□□□□□ -1.83
R3HDM1-220ENST00000628915 PLEK2Q9NYT0 353 aa3.61□□□□□ -1.83
R3HDM1-220ENST00000628915 CHD9Q3L8U1 2897 aa3.61□□□□□ -1.83
R3HDM1-220ENST00000628915 hCG_1818297A0A087WSY0 165 aa3.61□□□□□ -1.83
R3HDM1-220ENST00000628915 FAM240BA0A1B0GVZ2 78 aa3.61□□□□□ -1.83
R3HDM1-220ENST00000628915 A0A1W2PQU0 124 aa3.61□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms