RNA–Protein interactions for RNA: ENST00000626000.1

SNRPA1-216, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 5 BASIC

Gene SNRPA1, Length 539 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-216ENST00000626000 EPXP11678 715 aa12.46□□□□□ -0.41
SNRPA1-216ENST00000626000 IMPDH2P12268 514 aa12.46□□□□□ -0.41
SNRPA1-216ENST00000626000 PSMB1P20618 241 aaKnown RBP12.46□□□□□ -0.41
SNRPA1-216ENST00000626000 CALB2P22676 271 aa12.46□□□□□ -0.41
SNRPA1-216ENST00000626000 HTR2AP28223 471 aa12.46□□□□□ -0.41
SNRPA1-216ENST00000626000 OR3A2P47893 321 aa12.46□□□□□ -0.41
SNRPA1-216ENST00000626000 GSK3BP49841 420 aa12.46□□□□□ -0.41
SNRPA1-216ENST00000626000 HOXC5Q00444 222 aa12.46□□□□□ -0.41
SNRPA1-216ENST00000626000 CEACAM7Q14002 265 aa12.46□□□□□ -0.41
SNRPA1-216ENST00000626000 OR7A5Q15622 319 aa12.46□□□□□ -0.41
SNRPA1-216ENST00000626000 ENTPD8Q5MY95 495 aa12.46□□□□□ -0.41
SNRPA1-216ENST00000626000 OTUD3Q5T2D3 398 aaPredicted RBP12.46□□□□□ -0.41
SNRPA1-216ENST00000626000 TMEM225Q6GV28 225 aa12.46□□□□□ -0.41
SNRPA1-216ENST00000626000 CARM1Q86X55 608 aa12.46□□□□□ -0.41
SNRPA1-216ENST00000626000 TUSC5Q8IXB3 177 aa12.46□□□□□ -0.41
SNRPA1-216ENST00000626000 ZNF100Q8IYN0 542 aa12.46□□□□□ -0.41
SNRPA1-216ENST00000626000 SCAIQ8N9R8 606 aa12.46□□□□□ -0.41
SNRPA1-216ENST00000626000 ZNF610Q8N9Z0 462 aa12.46□□□□□ -0.41
SNRPA1-216ENST00000626000 ADPRHL1Q8NDY3 354 aa12.46□□□□□ -0.41
SNRPA1-216ENST00000626000 STEAP2Q8NFT2 490 aa12.46□□□□□ -0.41
SNRPA1-216ENST00000626000 OR6T1Q8NGN1 323 aa12.46□□□□□ -0.41
SNRPA1-216ENST00000626000 RNF217Q8TC41 542 aa12.46□□□□□ -0.41
SNRPA1-216ENST00000626000 ADAMTS16Q8TE57 1224 aa12.46□□□□□ -0.41
SNRPA1-216ENST00000626000 APH1AQ96BI3 265 aa12.46□□□□□ -0.41
SNRPA1-216ENST00000626000 KLHL4Q9C0H6 718 aa12.46□□□□□ -0.41
SNRPA1-216ENST00000626000 OPN3Q9H1Y3 402 aaPredicted RBP12.46□□□□□ -0.41
SNRPA1-216ENST00000626000 MCCC2Q9HCC0 563 aa12.46□□□□□ -0.41
SNRPA1-216ENST00000626000 C6orf203Q9P0P8 240 aaPredicted RBP12.46□□□□□ -0.41
SNRPA1-216ENST00000626000 MAGEL2Q9UJ55 1249 aa12.46□□□□□ -0.41
SNRPA1-216ENST00000626000 CLEC4AQ9UMR7 237 aa12.46□□□□□ -0.41
SNRPA1-216ENST00000626000 NOSIPQ9Y314 301 aaKnown RBP12.46□□□□□ -0.41
SNRPA1-216ENST00000626000 CENPEQ02224 2701 aa12.46□□□□□ -0.42
SNRPA1-216ENST00000626000 IGHV3-15A0A0B4J1V0 119 aa12.45□□□□□ -0.42
SNRPA1-216ENST00000626000 ZC3H12DA2A288 527 aaKnown RBP12.45□□□□□ -0.42
SNRPA1-216ENST00000626000 SH3D21A4FU49 640 aa12.45□□□□□ -0.42
SNRPA1-216ENST00000626000 ZNF716A6NP11 495 aa12.45□□□□□ -0.42
SNRPA1-216ENST00000626000 MRPL33O75394 65 aaKnown RBP12.45□□□□□ -0.42
SNRPA1-216ENST00000626000 OR5F1O95221 314 aa12.45□□□□□ -0.42
SNRPA1-216ENST00000626000 IGF2P01344 180 aa12.45□□□□□ -0.42
SNRPA1-216ENST00000626000 HSD17B1P14061 328 aa12.45□□□□□ -0.42
SNRPA1-216ENST00000626000 UGT2B10P36537 528 aa12.45□□□□□ -0.42
SNRPA1-216ENST00000626000 RBM34P42696 430 aaKnown RBP12.45□□□□□ -0.42
SNRPA1-216ENST00000626000 CDH12P55289 794 aa12.45□□□□□ -0.42
SNRPA1-216ENST00000626000 TAS2R41P59536 307 aa12.45□□□□□ -0.42
SNRPA1-216ENST00000626000 DAZAP2Q15038 168 aaPredicted RBP12.45□□□□□ -0.42
SNRPA1-216ENST00000626000 POU4F3Q15319 338 aa12.45□□□□□ -0.42
SNRPA1-216ENST00000626000 NPTX1Q15818 432 aa12.45□□□□□ -0.42
SNRPA1-216ENST00000626000 TTC33Q6PID6 262 aaPredicted RBP12.45□□□□□ -0.42
SNRPA1-216ENST00000626000 ZNF474Q6S9Z5 364 aaPredicted RBP12.45□□□□□ -0.42
SNRPA1-216ENST00000626000 TFAP2EQ6VUC0 442 aa12.45□□□□□ -0.42
SNRPA1-216ENST00000626000 Q6ZT83 130 aa12.45□□□□□ -0.42
SNRPA1-216ENST00000626000 ABHD12BQ7Z5M8 362 aaPredicted RBP12.45□□□□□ -0.42
SNRPA1-216ENST00000626000 COMTD1Q86VU5 262 aa12.45□□□□□ -0.42
SNRPA1-216ENST00000626000 VANGL1Q8TAA9 524 aaPredicted RBP12.45□□□□□ -0.42
SNRPA1-216ENST00000626000 BCAS4Q8TDM0 211 aa12.45□□□□□ -0.42
SNRPA1-216ENST00000626000 GEMIN6Q8WXD5 167 aaKnown RBP12.45□□□□□ -0.42
SNRPA1-216ENST00000626000 FAM162AQ96A26 154 aa12.45□□□□□ -0.42
SNRPA1-216ENST00000626000 TMEM45BQ96B21 275 aa12.45□□□□□ -0.42
SNRPA1-216ENST00000626000 HS6ST2Q96MM7 605 aa12.45□□□□□ -0.42
SNRPA1-216ENST00000626000 ASPNQ9BXN1 380 aa12.45□□□□□ -0.42
SNRPA1-216ENST00000626000 SAMD4AQ9UPU9 718 aaKnown RBP12.45□□□□□ -0.42
SNRPA1-216ENST00000626000 MPDZO75970 2070 aa12.44□□□□□ -0.42
SNRPA1-216ENST00000626000 LOC102725191A0A1B0GVB3 256 aa12.44□□□□□ -0.42
SNRPA1-216ENST00000626000 FTCDNL1E5RQL4 147 aa12.44□□□□□ -0.42
SNRPA1-216ENST00000626000 IFNW1P05000 195 aa12.44□□□□□ -0.42
SNRPA1-216ENST00000626000 GGT1P19440 569 aa12.44□□□□□ -0.42
SNRPA1-216ENST00000626000 CRYBA2P53672 197 aa12.44□□□□□ -0.42
SNRPA1-216ENST00000626000 TLE4Q04727 773 aa12.44□□□□□ -0.42
SNRPA1-216ENST00000626000 ST3GAL3Q11203 375 aa12.44□□□□□ -0.42
SNRPA1-216ENST00000626000 BNIP2Q12982 314 aa12.44□□□□□ -0.42
SNRPA1-216ENST00000626000 SLC17A1Q14916 467 aa12.44□□□□□ -0.42
SNRPA1-216ENST00000626000 IFI44LQ53G44 452 aa12.44□□□□□ -0.42
SNRPA1-216ENST00000626000 HIST2H2BCQ6DN03 193 aa12.44□□□□□ -0.42
SNRPA1-216ENST00000626000 CBLL1Q75N03 491 aa12.44□□□□□ -0.42
SNRPA1-216ENST00000626000 CYP4Z1Q86W10 505 aa12.44□□□□□ -0.42
SNRPA1-216ENST00000626000 FITM2Q8N6M3 262 aa12.44□□□□□ -0.42
SNRPA1-216ENST00000626000 NSL1Q96IY1 281 aa12.44□□□□□ -0.42
SNRPA1-216ENST00000626000 TPD52L3Q96J77 140 aa12.44□□□□□ -0.42
SNRPA1-216ENST00000626000 MED18Q9BUE0 208 aa12.44□□□□□ -0.42
SNRPA1-216ENST00000626000 C12orf49Q9H741 205 aa12.44□□□□□ -0.42
SNRPA1-216ENST00000626000 NGBQ9NPG2 151 aa12.44□□□□□ -0.42
SNRPA1-216ENST00000626000 CRIM1Q9NZV1 1036 aa12.44□□□□□ -0.42
SNRPA1-216ENST00000626000 TESMINQ9Y4I5 508 aa12.44□□□□□ -0.42
SNRPA1-216ENST00000626000 CRYBG3Q68DQ2 2970 aa12.43□□□□□ -0.42
SNRPA1-216ENST00000626000 CPSF4LA6NMK7 179 aaKnown RBP12.43□□□□□ -0.42
SNRPA1-216ENST00000626000 AKR7A3O95154 331 aa12.43□□□□□ -0.42
SNRPA1-216ENST00000626000 PAX7P23759 505 aa12.43□□□□□ -0.42
SNRPA1-216ENST00000626000 IL32P24001 234 aa12.43□□□□□ -0.42
SNRPA1-216ENST00000626000 RPS5P46782 204 aaKnown RBP12.43□□□□□ -0.42
SNRPA1-216ENST00000626000 TGFBR3Q03167 851 aa12.43□□□□□ -0.42
SNRPA1-216ENST00000626000 EGR4Q05215 589 aa12.43□□□□□ -0.42
SNRPA1-216ENST00000626000 ITGADQ13349 1161 aa12.43□□□□□ -0.42
SNRPA1-216ENST00000626000 FXNQ16595 210 aa12.43□□□□□ -0.42
SNRPA1-216ENST00000626000 EXOC3L2Q2M3D2 409 aa12.43□□□□□ -0.42
SNRPA1-216ENST00000626000 FBXW9Q5XUX1 488 aa12.43□□□□□ -0.42
SNRPA1-216ENST00000626000 LINC00114Q6XXX2 140 aa12.43□□□□□ -0.42
SNRPA1-216ENST00000626000 FKBP9P1Q75LS8 142 aa12.43□□□□□ -0.42
SNRPA1-216ENST00000626000 H1FNTQ75WM6 255 aaPredicted RBP12.43□□□□□ -0.42
SNRPA1-216ENST00000626000 P2RY8Q86VZ1 359 aa12.43□□□□□ -0.42
SNRPA1-216ENST00000626000 GABRG1Q8N1C3 465 aa12.43□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms