RNA–Protein interactions for RNA: ENST00000625926.1

SSBP4-215, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 5 BASIC

Gene SSBP4, Length 162 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-215ENST00000625926 CLEC9AQ6UXN8 241 aa9.54□□□□□ -0.88
SSBP4-215ENST00000625926 GPAT4Q86UL3 456 aa9.54□□□□□ -0.88
SSBP4-215ENST00000625926 LSRQ86X29 649 aaPredicted RBP9.54□□□□□ -0.88
SSBP4-215ENST00000625926 KRT73Q86Y46 540 aa9.54□□□□□ -0.88
SSBP4-215ENST00000625926 ZIC4Q8N9L1 334 aa9.54□□□□□ -0.88
SSBP4-215ENST00000625926 KBTBD8Q8NFY9 601 aa9.54□□□□□ -0.88
SSBP4-215ENST00000625926 OR9K2Q8NGE7 335 aa9.54□□□□□ -0.88
SSBP4-215ENST00000625926 OR52E4Q8NGH9 312 aa9.54□□□□□ -0.88
SSBP4-215ENST00000625926 OR52N5Q8NH56 324 aa9.54□□□□□ -0.88
SSBP4-215ENST00000625926 STK35Q8TDR2 534 aa9.54□□□□□ -0.88
SSBP4-215ENST00000625926 NEUROG1Q92886 237 aa9.54□□□□□ -0.88
SSBP4-215ENST00000625926 TRMT61AQ96FX7 289 aaKnown RBP9.54□□□□□ -0.88
SSBP4-215ENST00000625926 TRIM2Q9C040 744 aa9.54□□□□□ -0.88
SSBP4-215ENST00000625926 TMEM38AQ9H6F2 299 aa9.54□□□□□ -0.88
SSBP4-215ENST00000625926 SLC7A10Q9NS82 523 aa9.54□□□□□ -0.88
SSBP4-215ENST00000625926 FAIMQ9NVQ4 179 aa9.54□□□□□ -0.88
SSBP4-215ENST00000625926 ADPRHL2Q9NX46 363 aa9.54□□□□□ -0.88
SSBP4-215ENST00000625926 CISD1Q9NZ45 108 aaKnown RBP9.54□□□□□ -0.88
SSBP4-215ENST00000625926 NPAP1Q9NZP6 1156 aa9.54□□□□□ -0.88
SSBP4-215ENST00000625926 RPS6KB2Q9UBS0 482 aa9.54□□□□□ -0.88
SSBP4-215ENST00000625926 NIPSNAP3AQ9UFN0 247 aaPredicted RBP9.54□□□□□ -0.88
SSBP4-215ENST00000625926 DCTN4Q9UJW0 460 aa9.54□□□□□ -0.88
SSBP4-215ENST00000625926 TRIM33Q9UPN9 1127 aa9.54□□□□□ -0.88
SSBP4-215ENST00000625926 MGAT4BQ9UQ53 548 aa9.54□□□□□ -0.88
SSBP4-215ENST00000625926 NDUFAF1Q9Y375 327 aa9.54□□□□□ -0.88
SSBP4-215ENST00000625926 SLC25A15Q9Y619 301 aa9.54□□□□□ -0.88
SSBP4-215ENST00000625926 PRRC2AP48634 2157 aaKnown RBP9.54□□□□□ -0.88
SSBP4-215ENST00000625926 TRBV5-3A0A0A0MS03 114 aa9.53□□□□□ -0.88
SSBP4-215ENST00000625926 A0A1W2PR80 420 aa9.53□□□□□ -0.88
SSBP4-215ENST00000625926 PRORSD1PA6NEY8 169 aa9.53□□□□□ -0.88
SSBP4-215ENST00000625926 TRIM64A6NGJ6 449 aa9.53□□□□□ -0.88
SSBP4-215ENST00000625926 TRIM64BA6NI03 449 aa9.53□□□□□ -0.88
SSBP4-215ENST00000625926 ELOA3DA6NLF2 546 aaPredicted RBP9.53□□□□□ -0.88
SSBP4-215ENST00000625926 TMEM229AB2RXF0 380 aa9.53□□□□□ -0.88
SSBP4-215ENST00000625926 H7C1Q1 480 aa9.53□□□□□ -0.88
SSBP4-215ENST00000625926 OVOL3O00110 214 aa9.53□□□□□ -0.88
SSBP4-215ENST00000625926 ABCD4O14678 606 aa9.53□□□□□ -0.88
SSBP4-215ENST00000625926 SERPINB7O75635 380 aa9.53□□□□□ -0.88
SSBP4-215ENST00000625926 SOD3P08294 240 aa9.53□□□□□ -0.88
SSBP4-215ENST00000625926 ITGA5P08648 1049 aa9.53□□□□□ -0.88
SSBP4-215ENST00000625926 H2AFXP16104 143 aaPredicted RBP9.53□□□□□ -0.88
SSBP4-215ENST00000625926 SLC6A2P23975 617 aa9.53□□□□□ -0.88
SSBP4-215ENST00000625926 MPGP29372 298 aa9.53□□□□□ -0.88
SSBP4-215ENST00000625926 FOXG1P55316 489 aaPredicted RBP9.53□□□□□ -0.88
SSBP4-215ENST00000625926 SCARB2Q14108 478 aa9.53□□□□□ -0.88
SSBP4-215ENST00000625926 ELOA3BQ3SY89 546 aa9.53□□□□□ -0.88
SSBP4-215ENST00000625926 RUNDC3AQ59EK9 446 aa9.53□□□□□ -0.88
SSBP4-215ENST00000625926 C1QTNF12Q5T7M4 302 aa9.53□□□□□ -0.88
SSBP4-215ENST00000625926 C9orf135Q5VTT2 229 aa9.53□□□□□ -0.88
SSBP4-215ENST00000625926 DHRS4L2Q6PKH6 230 aa9.53□□□□□ -0.88
SSBP4-215ENST00000625926 DLEU7Q6UYE1 221 aa9.53□□□□□ -0.88
SSBP4-215ENST00000625926 C10orf111Q8N326 155 aa9.53□□□□□ -0.88
SSBP4-215ENST00000625926 CIARTQ8N365 385 aaPredicted RBP9.53□□□□□ -0.88
SSBP4-215ENST00000625926 C17orf78Q8N4C9 275 aa9.53□□□□□ -0.88
SSBP4-215ENST00000625926 LSMEM1Q8N8F7 131 aa9.53□□□□□ -0.88
SSBP4-215ENST00000625926 POMGNT2Q8NAT1 580 aa9.53□□□□□ -0.88
SSBP4-215ENST00000625926 C1orf162Q8NEQ5 155 aaPredicted RBP9.53□□□□□ -0.88
SSBP4-215ENST00000625926 BHLHE22Q8NFJ8 381 aaPredicted RBP9.53□□□□□ -0.88
SSBP4-215ENST00000625926 ELOA3Q8NG57 546 aa9.53□□□□□ -0.88
SSBP4-215ENST00000625926 MFSD8Q8NHS3 518 aa9.53□□□□□ -0.88
SSBP4-215ENST00000625926 GTPBP3Q969Y2 492 aaKnown RBP9.53□□□□□ -0.88
SSBP4-215ENST00000625926 SLC25A36Q96CQ1 311 aa9.53□□□□□ -0.88
SSBP4-215ENST00000625926 THOC1Q96FV9 657 aaKnown RBP9.53□□□□□ -0.88
SSBP4-215ENST00000625926 COX4I2Q96KJ9 171 aa9.53□□□□□ -0.88
SSBP4-215ENST00000625926 ZNF385AQ96PM9 386 aaKnown RBP9.53□□□□□ -0.88
SSBP4-215ENST00000625926 ZNF607Q96SK3 696 aa9.53□□□□□ -0.88
SSBP4-215ENST00000625926 SIKE1Q9BRV8 207 aa9.53□□□□□ -0.88
SSBP4-215ENST00000625926 C12orf10Q9HB07 376 aa9.53□□□□□ -0.88
SSBP4-215ENST00000625926 LEF1Q9UJU2 399 aaPredicted RBP9.53□□□□□ -0.88
SSBP4-215ENST00000625926 RASD1Q9Y272 281 aa9.53□□□□□ -0.88
SSBP4-215ENST00000625926 SHISA9B4DS77 424 aa9.52□□□□□ -0.89
SSBP4-215ENST00000625926 M0R1B8 84 aa9.52□□□□□ -0.89
SSBP4-215ENST00000625926 SMAD7O15105 426 aaKnown RBP9.52□□□□□ -0.89
SSBP4-215ENST00000625926 ANGPT2O15123 496 aa9.52□□□□□ -0.89
SSBP4-215ENST00000625926 OR2T1O43869 369 aa9.52□□□□□ -0.89
SSBP4-215ENST00000625926 TPST1O60507 370 aa9.52□□□□□ -0.89
SSBP4-215ENST00000625926 EDF1O60869 148 aaKnown RBP9.52□□□□□ -0.89
SSBP4-215ENST00000625926 KRT33AO76009 404 aa9.52□□□□□ -0.89
SSBP4-215ENST00000625926 PNMTP11086 282 aa9.52□□□□□ -0.89
SSBP4-215ENST00000625926 HOXB4P17483 251 aaPredicted RBP9.52□□□□□ -0.89
SSBP4-215ENST00000625926 CD40P25942 277 aa9.52□□□□□ -0.89
SSBP4-215ENST00000625926 GTF2E2P29084 291 aaKnown RBP9.52□□□□□ -0.89
SSBP4-215ENST00000625926 RPS5P46782 204 aaKnown RBP9.52□□□□□ -0.89
SSBP4-215ENST00000625926 ZNF83P51522 516 aa9.52□□□□□ -0.89
SSBP4-215ENST00000625926 P2RY4P51582 365 aa9.52□□□□□ -0.89
SSBP4-215ENST00000625926 CDH11P55287 796 aa9.52□□□□□ -0.89
SSBP4-215ENST00000625926 EGR4Q05215 589 aa9.52□□□□□ -0.89
SSBP4-215ENST00000625926 LTBQ06643 244 aa9.52□□□□□ -0.89
SSBP4-215ENST00000625926 ADRM1Q16186 407 aa9.52□□□□□ -0.89
SSBP4-215ENST00000625926 PGGHGQ32M88 737 aa9.52□□□□□ -0.89
SSBP4-215ENST00000625926 METTL21CQ5VZV1 264 aa9.52□□□□□ -0.89
SSBP4-215ENST00000625926 ULK3Q6PHR2 472 aa9.52□□□□□ -0.89
SSBP4-215ENST00000625926 SLC22A25Q6T423 547 aa9.52□□□□□ -0.89
SSBP4-215ENST00000625926 C5orf46Q6UWT4 87 aa9.52□□□□□ -0.89
SSBP4-215ENST00000625926 C6orf89Q6UWU4 347 aa9.52□□□□□ -0.89
SSBP4-215ENST00000625926 CREB3L2Q70SY1 520 aa9.52□□□□□ -0.89
SSBP4-215ENST00000625926 Q71RC1 249 aaPredicted RBP9.52□□□□□ -0.89
SSBP4-215ENST00000625926 ABHD12BQ7Z5M8 362 aaPredicted RBP9.52□□□□□ -0.89
SSBP4-215ENST00000625926 NET1Q7Z628 596 aaPredicted RBP9.52□□□□□ -0.89
SSBP4-215ENST00000625926 DEPDC4Q8N2C3 294 aa9.52□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms