RNA–Protein interactions for RNA: ENST00000622183.1

CPNE3-213, Transcript of copine 3, humanhuman

TSL 3

Gene CPNE3, Length 156 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-213ENST00000622183 TPMTP51580 245 aa3.54□□□□□ -1.84
CPNE3-213ENST00000622183 RPS8P62241 208 aaKnown RBP3.54□□□□□ -1.84
CPNE3-213ENST00000622183 BEX3Q00994 111 aa3.54□□□□□ -1.84
CPNE3-213ENST00000622183 MRPL28Q13084 256 aaKnown RBP3.54□□□□□ -1.84
CPNE3-213ENST00000622183 FAM220AQ7Z4H9 259 aa3.54□□□□□ -1.84
CPNE3-213ENST00000622183 TMEM179BQ7Z7N9 219 aa3.54□□□□□ -1.84
CPNE3-213ENST00000622183 NUDCD3Q8IVD9 361 aa3.54□□□□□ -1.84
CPNE3-213ENST00000622183 TMEM252Q8N6L7 170 aa3.54□□□□□ -1.84
CPNE3-213ENST00000622183 OR2AP1Q8NGE2 309 aa3.54□□□□□ -1.84
CPNE3-213ENST00000622183 OR52I1Q8NGK6 324 aa3.54□□□□□ -1.84
CPNE3-213ENST00000622183 OR1L6Q8NGR2 347 aa3.54□□□□□ -1.84
CPNE3-213ENST00000622183 DNAJA4Q8WW22 397 aaPredicted RBP3.54□□□□□ -1.84
CPNE3-213ENST00000622183 TBRG4Q969Z0 631 aaKnown RBP eCLIP3.54□□□□□ -1.84
CPNE3-213ENST00000622183 NUS1Q96E22 293 aa3.54□□□□□ -1.84
CPNE3-213ENST00000622183 C12orf42Q96LP6 360 aa3.54□□□□□ -1.84
CPNE3-213ENST00000622183 KCNA7Q96RP8 456 aa3.54□□□□□ -1.84
CPNE3-213ENST00000622183 EBF4Q9BQW3 602 aa3.54□□□□□ -1.84
CPNE3-213ENST00000622183 PPA2Q9H2U2 334 aa3.54□□□□□ -1.84
CPNE3-213ENST00000622183 NT5MQ9NPB1 228 aa3.54□□□□□ -1.84
CPNE3-213ENST00000622183 SPATA7Q9P0W8 599 aa3.54□□□□□ -1.84
CPNE3-213ENST00000622183 KIF25Q9UIL4 384 aa3.54□□□□□ -1.84
CPNE3-213ENST00000622183 BTNL2Q9UIR0 455 aa3.54□□□□□ -1.84
CPNE3-213ENST00000622183 IGLV3-10A0A075B6K4 115 aa3.53□□□□□ -1.84
CPNE3-213ENST00000622183 IGHV3OR16-13A0A075B7E8 117 aa3.53□□□□□ -1.84
CPNE3-213ENST00000622183 A0A1W2PPV9 198 aa3.53□□□□□ -1.84
CPNE3-213ENST00000622183 GOLGA8OA6NCC3 632 aa3.53□□□□□ -1.84
CPNE3-213ENST00000622183 CCDC182A6NF36 153 aa3.53□□□□□ -1.84
CPNE3-213ENST00000622183 OR5B21A6NL26 309 aa3.53□□□□□ -1.84
CPNE3-213ENST00000622183 E7ENQ6 273 aa3.53□□□□□ -1.84
CPNE3-213ENST00000622183 GOLGA8NF8WBI6 632 aa3.53□□□□□ -1.84
CPNE3-213ENST00000622183 SNAPINO95295 136 aa3.53□□□□□ -1.84
CPNE3-213ENST00000622183 TIMP1P01033 207 aa3.53□□□□□ -1.84
CPNE3-213ENST00000622183 GAPDHP04406 335 aaKnown RBP3.53□□□□□ -1.84
CPNE3-213ENST00000622183 BST2Q10589 180 aaKnown RBP3.53□□□□□ -1.84
CPNE3-213ENST00000622183 PLD1Q13393 1074 aa3.53□□□□□ -1.84
CPNE3-213ENST00000622183 OR5I1Q13606 314 aa3.53□□□□□ -1.84
CPNE3-213ENST00000622183 ZNF77Q15935 545 aa3.53□□□□□ -1.84
CPNE3-213ENST00000622183 DGUOKQ16854 277 aa3.53□□□□□ -1.84
CPNE3-213ENST00000622183 MICBQ29980 383 aa3.53□□□□□ -1.84
CPNE3-213ENST00000622183 BCL7AQ4VC05 210 aa3.53□□□□□ -1.84
CPNE3-213ENST00000622183 RSBN1Q5VWQ0 802 aaPredicted RBP3.53□□□□□ -1.84
CPNE3-213ENST00000622183 SCARA5Q6ZMJ2 495 aa3.53□□□□□ -1.84
CPNE3-213ENST00000622183 ECHDC2Q86YB7 292 aa3.53□□□□□ -1.84
CPNE3-213ENST00000622183 CEND1Q8N111 149 aa3.53□□□□□ -1.84
CPNE3-213ENST00000622183 C11orf42Q8N5U0 333 aa3.53□□□□□ -1.84
CPNE3-213ENST00000622183 ZNF564Q8TBZ8 553 aaPredicted RBP3.53□□□□□ -1.84
CPNE3-213ENST00000622183 BRSK1Q8TDC3 778 aa3.53□□□□□ -1.84
CPNE3-213ENST00000622183 FGF11Q92914 225 aa3.53□□□□□ -1.84
CPNE3-213ENST00000622183 RASD2Q96D21 266 aa3.53□□□□□ -1.84
CPNE3-213ENST00000622183 IFT74Q96LB3 600 aa3.53□□□□□ -1.84
CPNE3-213ENST00000622183 CNN2Q99439 309 aaKnown RBP3.53□□□□□ -1.84
CPNE3-213ENST00000622183 FMO2Q99518 471 aa3.53□□□□□ -1.84
CPNE3-213ENST00000622183 ARHGDIGQ99819 225 aa3.53□□□□□ -1.84
CPNE3-213ENST00000622183 ZFP14Q9HCL3 533 aa3.53□□□□□ -1.84
CPNE3-213ENST00000622183 SH2D2AQ9NP31 389 aa3.53□□□□□ -1.84
CPNE3-213ENST00000622183 HOXC10Q9NYD6 342 aa3.53□□□□□ -1.84
CPNE3-213ENST00000622183 TREM2Q9NZC2 230 aa3.53□□□□□ -1.84
CPNE3-213ENST00000622183 IKZF2Q9UKS7 526 aa3.53□□□□□ -1.84
CPNE3-213ENST00000622183 KCNIP3Q9Y2W7 256 aa3.53□□□□□ -1.84
CPNE3-213ENST00000622183 MMP24Q9Y5R2 645 aa3.53□□□□□ -1.84
CPNE3-213ENST00000622183 V9GY05 133 aa3.53□□□□□ -1.84
CPNE3-213ENST00000622183 TNRQ92752 1358 aa3.52□□□□□ -1.85
CPNE3-213ENST00000622183 CTAGE15A4D2H0 777 aa3.52□□□□□ -1.85
CPNE3-213ENST00000622183 MBTPS2O43462 519 aa3.52□□□□□ -1.85
CPNE3-213ENST00000622183 ZNF780AO75290 641 aaPredicted RBP3.52□□□□□ -1.85
CPNE3-213ENST00000622183 UPK3AO75631 287 aa3.52□□□□□ -1.85
CPNE3-213ENST00000622183 IGKV3-15P01624 115 aa3.52□□□□□ -1.85
CPNE3-213ENST00000622183 KLK3P07288 261 aaPredicted RBP3.52□□□□□ -1.85
CPNE3-213ENST00000622183 KLK2P20151 261 aa3.52□□□□□ -1.85
CPNE3-213ENST00000622183 CRYBB2P43320 205 aa3.52□□□□□ -1.85
CPNE3-213ENST00000622183 KIR2DS4P43632 304 aa3.52□□□□□ -1.85
CPNE3-213ENST00000622183 KLK7P49862 253 aa3.52□□□□□ -1.85
CPNE3-213ENST00000622183 GPM6AP51674 278 aa3.52□□□□□ -1.85
CPNE3-213ENST00000622183 CSNK1G2P78368 415 aa3.52□□□□□ -1.85
CPNE3-213ENST00000622183 SCRN3Q0VDG4 424 aa3.52□□□□□ -1.85
CPNE3-213ENST00000622183 GNMTQ14749 295 aa3.52□□□□□ -1.85
CPNE3-213ENST00000622183 C1orf146Q5VVC0 180 aa3.52□□□□□ -1.85
CPNE3-213ENST00000622183 PRSS41Q7RTY9 318 aa3.52□□□□□ -1.85
CPNE3-213ENST00000622183 CTAGE6Q86UF2 777 aa3.52□□□□□ -1.85
CPNE3-213ENST00000622183 PAQR7Q86WK9 346 aa3.52□□□□□ -1.85
CPNE3-213ENST00000622183 ZNF100Q8IYN0 542 aa3.52□□□□□ -1.85
CPNE3-213ENST00000622183 C6orf223Q8N319 242 aa3.52□□□□□ -1.85
CPNE3-213ENST00000622183 FBXL16Q8N461 479 aa3.52□□□□□ -1.85
CPNE3-213ENST00000622183 OR10G3Q8NGC4 313 aa3.52□□□□□ -1.85
CPNE3-213ENST00000622183 SETD7Q8WTS6 366 aaKnown RBP3.52□□□□□ -1.85
CPNE3-213ENST00000622183 CMTM7Q96FZ5 175 aa3.52□□□□□ -1.85
CPNE3-213ENST00000622183 C16orf74Q96GX8 76 aa3.52□□□□□ -1.85
CPNE3-213ENST00000622183 PKNOX2Q96KN3 472 aa3.52□□□□□ -1.85
CPNE3-213ENST00000622183 B3GALT6Q96L58 329 aa3.52□□□□□ -1.85
CPNE3-213ENST00000622183 PANX2Q96RD6 677 aa3.52□□□□□ -1.85
CPNE3-213ENST00000622183 GPR61Q9BZJ8 451 aa3.52□□□□□ -1.85
CPNE3-213ENST00000622183 C20orf85Q9H1P6 137 aa3.52□□□□□ -1.85
CPNE3-213ENST00000622183 SLC7A8Q9UHI5 535 aa3.52□□□□□ -1.85
CPNE3-213ENST00000622183 CFAP65Q6ZU64 1925 aaKnown RBP3.51□□□□□ -1.85
CPNE3-213ENST00000622183 A6NIZ1 184 aa3.51□□□□□ -1.85
CPNE3-213ENST00000622183 ABCD4O14678 606 aa3.51□□□□□ -1.85
CPNE3-213ENST00000622183 MMP1P03956 469 aa3.51□□□□□ -1.85
CPNE3-213ENST00000622183 CRYGBP07316 175 aa3.51□□□□□ -1.85
CPNE3-213ENST00000622183 ATP6V1B2P21281 511 aa3.51□□□□□ -1.85
CPNE3-213ENST00000622183 CXCR2P25025 360 aa3.51□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms