RNA–Protein interactions for RNA: ENST00000618902.1

SHMT1-211, Transcript of serine hydroxymethyltransferase 1, humanhuman

TSL 5 BASIC

Gene SHMT1, Length 378 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT1-211ENST00000618902 TRIM16LQ309B1 348 aa4.75□□□□□ -1.65
SHMT1-211ENST00000618902 SLC25A35Q3KQZ1 300 aa4.75□□□□□ -1.65
SHMT1-211ENST00000618902 ARHGAP11BQ3KRB8 267 aa4.75□□□□□ -1.65
SHMT1-211ENST00000618902 KLHL26Q53HC5 615 aa4.75□□□□□ -1.65
SHMT1-211ENST00000618902 EIPR1Q53HC9 387 aa4.75□□□□□ -1.65
SHMT1-211ENST00000618902 EMC4Q5J8M3 183 aa4.75□□□□□ -1.65
SHMT1-211ENST00000618902 RPS26P11Q5JNZ5 115 aaPredicted RBP4.75□□□□□ -1.65
SHMT1-211ENST00000618902 DCST1Q5T197 706 aa4.75□□□□□ -1.65
SHMT1-211ENST00000618902 C1QL3Q5VWW1 255 aa4.75□□□□□ -1.65
SHMT1-211ENST00000618902 RNLSQ5VYX0 342 aa4.75□□□□□ -1.65
SHMT1-211ENST00000618902 FAHD1Q6P587 224 aa4.75□□□□□ -1.65
SHMT1-211ENST00000618902 TBPL2Q6SJ96 375 aa4.75□□□□□ -1.65
SHMT1-211ENST00000618902 USP43Q70EL4 1123 aa4.75□□□□□ -1.65
SHMT1-211ENST00000618902 TRILQ7L0X0 811 aa4.75□□□□□ -1.65
SHMT1-211ENST00000618902 SSX8Q7RTT4 187 aa4.75□□□□□ -1.65
SHMT1-211ENST00000618902 YRDCQ86U90 279 aaKnown RBP4.75□□□□□ -1.65
SHMT1-211ENST00000618902 P2RY8Q86VZ1 359 aa4.75□□□□□ -1.65
SHMT1-211ENST00000618902 DOLPP1Q86YN1 238 aa4.75□□□□□ -1.65
SHMT1-211ENST00000618902 ZZZ3Q8IYH5 903 aa4.75□□□□□ -1.65
SHMT1-211ENST00000618902 C11orf65Q8NCR3 313 aa4.75□□□□□ -1.65
SHMT1-211ENST00000618902 OR2M3Q8NG83 312 aa4.75□□□□□ -1.65
SHMT1-211ENST00000618902 OR1J4Q8NGS1 313 aa4.75□□□□□ -1.65
SHMT1-211ENST00000618902 LILRB4Q8NHJ6 448 aa4.75□□□□□ -1.65
SHMT1-211ENST00000618902 NEIL3Q8TAT5 605 aa4.75□□□□□ -1.65
SHMT1-211ENST00000618902 ZPLD1Q8TCW7 415 aa4.75□□□□□ -1.65
SHMT1-211ENST00000618902 DUSP19Q8WTR2 217 aa4.75□□□□□ -1.65
SHMT1-211ENST00000618902 SLC38A5Q8WUX1 472 aa4.75□□□□□ -1.65
SHMT1-211ENST00000618902 RND1Q92730 232 aa4.75□□□□□ -1.65
SHMT1-211ENST00000618902 SLC38A4Q969I6 547 aa4.75□□□□□ -1.65
SHMT1-211ENST00000618902 ABTB1Q969K4 478 aaPredicted RBP4.75□□□□□ -1.65
SHMT1-211ENST00000618902 ZDHHC16Q969W1 377 aa4.75□□□□□ -1.65
SHMT1-211ENST00000618902 LGALS12Q96DT0 336 aa4.75□□□□□ -1.65
SHMT1-211ENST00000618902 TRNT1Q96Q11 434 aaKnown RBP4.75□□□□□ -1.65
SHMT1-211ENST00000618902 DMRTA2Q96SC8 542 aa4.75□□□□□ -1.65
SHMT1-211ENST00000618902 PITX2Q99697 317 aa4.75□□□□□ -1.65
SHMT1-211ENST00000618902 WFDC6Q9BQY6 131 aa4.75□□□□□ -1.65
SHMT1-211ENST00000618902 GABARAPL3Q9BY60 117 aa4.75□□□□□ -1.65
SHMT1-211ENST00000618902 PRDM14Q9GZV8 571 aa4.75□□□□□ -1.65
SHMT1-211ENST00000618902 DEFB127Q9H1M4 99 aa4.75□□□□□ -1.65
SHMT1-211ENST00000618902 SLC6A15Q9H2J7 730 aa4.75□□□□□ -1.65
SHMT1-211ENST00000618902 DSN1Q9H410 356 aa4.75□□□□□ -1.65
SHMT1-211ENST00000618902 ZNF703Q9H7S9 590 aaPredicted RBP4.75□□□□□ -1.65
SHMT1-211ENST00000618902 PTGES2Q9H7Z7 377 aa4.75□□□□□ -1.65
SHMT1-211ENST00000618902 METTL7AQ9H8H3 244 aa4.75□□□□□ -1.65
SHMT1-211ENST00000618902 CALHM2Q9HA72 323 aa4.75□□□□□ -1.65
SHMT1-211ENST00000618902 MOV10Q9HCE1 1003 aaKnown RBP4.75□□□□□ -1.65
SHMT1-211ENST00000618902 CNOT2Q9NZN8 540 aaKnown RBP4.75□□□□□ -1.65
SHMT1-211ENST00000618902 MED11Q9P086 117 aa4.75□□□□□ -1.65
SHMT1-211ENST00000618902 SPRR3Q9UBC9 169 aa4.75□□□□□ -1.65
SHMT1-211ENST00000618902 TNFRSF10DQ9UBN6 386 aa4.75□□□□□ -1.65
SHMT1-211ENST00000618902 SEC14L4Q9UDX3 406 aa4.75□□□□□ -1.65
SHMT1-211ENST00000618902 POFUT2Q9Y2G5 429 aa4.75□□□□□ -1.65
SHMT1-211ENST00000618902 FAM32AQ9Y421 112 aaKnown RBP4.75□□□□□ -1.65
SHMT1-211ENST00000618902 WIF1Q9Y5W5 379 aa4.75□□□□□ -1.65
SHMT1-211ENST00000618902 PEX16Q9Y5Y5 336 aa4.75□□□□□ -1.65
SHMT1-211ENST00000618902 CACNA1DQ01668 2161 aa4.75□□□□□ -1.65
SHMT1-211ENST00000618902 DOCK7Q96N67 2140 aa4.75□□□□□ -1.65
SHMT1-211ENST00000618902 KIAA1549Q9HCM3 1950 aa4.74□□□□□ -1.65
SHMT1-211ENST00000618902 PRR14LQ5THK1 2151 aa4.74□□□□□ -1.65
SHMT1-211ENST00000618902 A0A1W2PQD3 144 aa4.74□□□□□ -1.65
SHMT1-211ENST00000618902 IRGMA1A4Y4 181 aa4.74□□□□□ -1.65
SHMT1-211ENST00000618902 EFCAB10A6NFE3 127 aa4.74□□□□□ -1.65
SHMT1-211ENST00000618902 CD8B2A6NJW9 211 aa4.74□□□□□ -1.65
SHMT1-211ENST00000618902 SNTNA6NMZ2 147 aa4.74□□□□□ -1.65
SHMT1-211ENST00000618902 POM121CA8CG34 1229 aa4.74□□□□□ -1.65
SHMT1-211ENST00000618902 CLCA1A8K7I4 914 aa4.74□□□□□ -1.65
SHMT1-211ENST00000618902 TMEM229AB2RXF0 380 aa4.74□□□□□ -1.65
SHMT1-211ENST00000618902 KDM4EB2RXH2 506 aaPredicted RBP4.74□□□□□ -1.65
SHMT1-211ENST00000618902 PTGES3LE9PB15 166 aa4.74□□□□□ -1.65
SHMT1-211ENST00000618902 LOC110117498-PIK3R3F6TDL0 507 aa4.74□□□□□ -1.65
SHMT1-211ENST00000618902 EFNA2O43921 213 aa4.74□□□□□ -1.65
SHMT1-211ENST00000618902 GMFGO60234 142 aa4.74□□□□□ -1.65
SHMT1-211ENST00000618902 UGT2B17O75795 530 aa4.74□□□□□ -1.65
SHMT1-211ENST00000618902 PDE9AO76083 593 aa4.74□□□□□ -1.65
SHMT1-211ENST00000618902 EPPINO95925 133 aa4.74□□□□□ -1.65
SHMT1-211ENST00000618902 RNF224P0DH78 156 aa4.74□□□□□ -1.65
SHMT1-211ENST00000618902 ELK4P28324 431 aa4.74□□□□□ -1.65
SHMT1-211ENST00000618902 ADH6P28332 368 aa4.74□□□□□ -1.65
SHMT1-211ENST00000618902 SSTR2P30874 369 aa4.74□□□□□ -1.65
SHMT1-211ENST00000618902 SRD5A2P31213 254 aa4.74□□□□□ -1.65
SHMT1-211ENST00000618902 RRM2P31350 389 aa4.74□□□□□ -1.65
SHMT1-211ENST00000618902 PCGF2P35227 344 aa4.74□□□□□ -1.65
SHMT1-211ENST00000618902 SOX6P35712 828 aa4.74□□□□□ -1.65
SHMT1-211ENST00000618902 EIF1P41567 113 aaKnown RBP4.74□□□□□ -1.65
SHMT1-211ENST00000618902 CRATP43155 626 aa4.74□□□□□ -1.65
SHMT1-211ENST00000618902 MASP1P48740 699 aa4.74□□□□□ -1.65
SHMT1-211ENST00000618902 ANXA11P50995 505 aaKnown RBP4.74□□□□□ -1.65
SHMT1-211ENST00000618902 MAP2K6P52564 334 aa4.74□□□□□ -1.65
SHMT1-211ENST00000618902 ATP12AP54707 1039 aa4.74□□□□□ -1.65
SHMT1-211ENST00000618902 DSCR4P56555 118 aaPredicted RBP4.74□□□□□ -1.65
SHMT1-211ENST00000618902 DEFA1P59665 94 aa4.74□□□□□ -1.65
SHMT1-211ENST00000618902 DEFA3P59666 94 aa4.74□□□□□ -1.65
SHMT1-211ENST00000618902 DSTNP60981 165 aa4.74□□□□□ -1.65
SHMT1-211ENST00000618902 ZNF117Q03924 483 aa4.74□□□□□ -1.65
SHMT1-211ENST00000618902 PRKCDQ05655 676 aa4.74□□□□□ -1.65
SHMT1-211ENST00000618902 C17orf67Q0P5P2 114 aa4.74□□□□□ -1.65
SHMT1-211ENST00000618902 COX10Q12887 443 aa4.74□□□□□ -1.65
SHMT1-211ENST00000618902 SKP2Q13309 424 aa4.74□□□□□ -1.65
SHMT1-211ENST00000618902 ITGADQ13349 1161 aa4.74□□□□□ -1.65
SHMT1-211ENST00000618902 GNA13Q14344 377 aa4.74□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 62.3 ms