RNA–Protein interactions for RNA: ENST00000618207.4

CIITA-212, Transcript of class II major histocompatibility complex transactivator, humanhuman

TSL 5 BASIC

Gene CIITA, Length 2,844 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIITA-212ENST00000618207 NANSQ9NR45 359 aa11.34□□□□□ -0.59
CIITA-212ENST00000618207 ZMIZ1Q9ULJ6 1067 aa11.34□□□□□ -0.59
CIITA-212ENST00000618207 IGKV1D-42A0A075B6H8 117 aa11.33□□□□□ -0.6
CIITA-212ENST00000618207 TEX13CA0A0J9YWL9 993 aa11.33□□□□□ -0.6
CIITA-212ENST00000618207 TRDV1A0A1B0GX56 115 aa11.33□□□□□ -0.6
CIITA-212ENST00000618207 OR6C68A6NDL8 312 aa11.33□□□□□ -0.6
CIITA-212ENST00000618207 C11orf98E9PRG8 122 aa11.33□□□□□ -0.6
CIITA-212ENST00000618207 J3QRE1 110 aa11.33□□□□□ -0.6
CIITA-212ENST00000618207 TIAF1O95411 115 aa11.33□□□□□ -0.6
CIITA-212ENST00000618207 TCEA1P23193 301 aaKnown RBP11.33□□□□□ -0.6
CIITA-212ENST00000618207 APEX1P27695 318 aaKnown RBP11.33□□□□□ -0.6
CIITA-212ENST00000618207 TACR3P29371 465 aa11.33□□□□□ -0.6
CIITA-212ENST00000618207 DDI2Q5TDH0 399 aa11.33□□□□□ -0.6
CIITA-212ENST00000618207 LINC00114Q6XXX2 140 aa11.33□□□□□ -0.6
CIITA-212ENST00000618207 ARIH2OSQ8N7S6 290 aa11.33□□□□□ -0.6
CIITA-212ENST00000618207 DNAJA4Q8WW22 397 aaPredicted RBP11.33□□□□□ -0.6
CIITA-212ENST00000618207 DNASE2BQ8WZ79 361 aa11.33□□□□□ -0.6
CIITA-212ENST00000618207 SLC25A36Q96CQ1 311 aa11.33□□□□□ -0.6
CIITA-212ENST00000618207 ORAI1Q96D31 301 aa11.33□□□□□ -0.6
CIITA-212ENST00000618207 KTI12Q96EK9 354 aaPredicted RBP11.33□□□□□ -0.6
CIITA-212ENST00000618207 SLC46A1Q96NT5 459 aa11.33□□□□□ -0.6
CIITA-212ENST00000618207 FOXN4Q96NZ1 517 aa11.33□□□□□ -0.6
CIITA-212ENST00000618207 SRA1Q9HD15 236 aaKnown RBP11.33□□□□□ -0.6
CIITA-212ENST00000618207 TRIM36Q9NQ86 728 aa11.33□□□□□ -0.6
CIITA-212ENST00000618207 RPRD1BQ9NQG5 326 aaKnown RBP11.33□□□□□ -0.6
CIITA-212ENST00000618207 CHRNA9Q9UGM1 479 aa11.33□□□□□ -0.6
CIITA-212ENST00000618207 CELSR3Q9NYQ7 3312 aa11.33□□□□□ -0.6
CIITA-212ENST00000618207 A0A1W2PQ09 198 aa11.33□□□□□ -0.6
CIITA-212ENST00000618207 IDSB3KWA1 339 aa11.33□□□□□ -0.6
CIITA-212ENST00000618207 SNPHO15079 494 aa11.33□□□□□ -0.6
CIITA-212ENST00000618207 RBM34P42696 430 aaKnown RBP11.33□□□□□ -0.6
CIITA-212ENST00000618207 GRK6P43250 576 aa11.33□□□□□ -0.6
CIITA-212ENST00000618207 EPHA4P54764 986 aa11.33□□□□□ -0.6
CIITA-212ENST00000618207 TPTEP56180 551 aa11.33□□□□□ -0.6
CIITA-212ENST00000618207 OR10A3P58181 314 aa11.33□□□□□ -0.6
CIITA-212ENST00000618207 DEFA1P59665 94 aa11.33□□□□□ -0.6
CIITA-212ENST00000618207 DEFA3P59666 94 aa11.33□□□□□ -0.6
CIITA-212ENST00000618207 PLCXD2Q0VAA5 305 aa11.33□□□□□ -0.6
CIITA-212ENST00000618207 P2RY14Q15391 338 aa11.33□□□□□ -0.6
CIITA-212ENST00000618207 SIGIRRQ6IA17 410 aa11.33□□□□□ -0.6
CIITA-212ENST00000618207 LEG1Q6P5S2 330 aa11.33□□□□□ -0.6
CIITA-212ENST00000618207 ZSCAN2Q7Z7L9 614 aaPredicted RBP11.33□□□□□ -0.6
CIITA-212ENST00000618207 ZNF511Q8NB15 262 aa11.33□□□□□ -0.6
CIITA-212ENST00000618207 PIGKQ92643 395 aa11.33□□□□□ -0.6
CIITA-212ENST00000618207 B3GNT4Q9C0J1 378 aa11.33□□□□□ -0.6
CIITA-212ENST00000618207 IQCMA0A1B0GVH7 501 aa11.32□□□□□ -0.6
CIITA-212ENST00000618207 ISPDA4D126 451 aa11.32□□□□□ -0.6
CIITA-212ENST00000618207 CDC40O60508 579 aaKnown RBP eCLIP11.32□□□□□ -0.6
CIITA-212ENST00000618207 PLGP00747 810 aaPredicted RBP11.32□□□□□ -0.6
CIITA-212ENST00000618207 MT-ND5P03915 603 aa11.32□□□□□ -0.6
CIITA-212ENST00000618207 IL7P13232 177 aa11.32□□□□□ -0.6
CIITA-212ENST00000618207 SKP2Q13309 424 aa11.32□□□□□ -0.6
CIITA-212ENST00000618207 EBPQ15125 230 aaKnown RBP11.32□□□□□ -0.6
CIITA-212ENST00000618207 SHBQ15464 509 aa11.32□□□□□ -0.6
CIITA-212ENST00000618207 CPEB4Q17RY0 729 aaKnown RBP eCLIP11.32□□□□□ -0.6
CIITA-212ENST00000618207 WBP2NLQ6ICG8 309 aa11.32□□□□□ -0.6
CIITA-212ENST00000618207 ZNF574Q6ZN55 896 aaPredicted RBP11.32□□□□□ -0.6
CIITA-212ENST00000618207 NR2C2APQ86WQ0 139 aa11.32□□□□□ -0.6
CIITA-212ENST00000618207 D2HGDHQ8N465 521 aa11.32□□□□□ -0.6
CIITA-212ENST00000618207 ADIPOR1Q96A54 375 aa11.32□□□□□ -0.6
CIITA-212ENST00000618207 ZNF501Q96CX3 271 aaPredicted RBP11.32□□□□□ -0.6
CIITA-212ENST00000618207 ZNF578Q96N58 590 aaPredicted RBP11.32□□□□□ -0.6
CIITA-212ENST00000618207 OR6C1Q96RD1 312 aa11.32□□□□□ -0.6
CIITA-212ENST00000618207 TBL1XR1Q9BZK7 514 aa11.32□□□□□ -0.6
CIITA-212ENST00000618207 COPS7AQ9UBW8 275 aa11.32□□□□□ -0.6
CIITA-212ENST00000618207 GNG8Q9UK08 70 aa11.32□□□□□ -0.6
CIITA-212ENST00000618207 TBC1D24Q9ULP9 559 aa11.32□□□□□ -0.6
CIITA-212ENST00000618207 A0A1B0GX78 115 aa11.32□□□□□ -0.6
CIITA-212ENST00000618207 BLACEA4D250 179 aa11.32□□□□□ -0.6
CIITA-212ENST00000618207 IL33O95760 270 aa11.32□□□□□ -0.6
CIITA-212ENST00000618207 APOA1P02647 267 aa11.32□□□□□ -0.6
CIITA-212ENST00000618207 CFIP05156 583 aa11.32□□□□□ -0.6
CIITA-212ENST00000618207 SLC2A5P22732 501 aa11.32□□□□□ -0.6
CIITA-212ENST00000618207 MAGEB1P43366 347 aa11.32□□□□□ -0.6
CIITA-212ENST00000618207 CTXN1P60606 82 aa11.32□□□□□ -0.6
CIITA-212ENST00000618207 ZNF117Q03924 483 aa11.32□□□□□ -0.6
CIITA-212ENST00000618207 ELAVL1Q15717 326 aaKnown RBP11.32□□□□□ -0.6
CIITA-212ENST00000618207 AGAP7PQ5VUJ5 663 aa11.32□□□□□ -0.6
CIITA-212ENST00000618207 CEACAM19Q7Z692 300 aa11.32□□□□□ -0.6
CIITA-212ENST00000618207 LINC00469Q8N7U9 141 aa11.32□□□□□ -0.6
CIITA-212ENST00000618207 CEP76Q8TAP6 659 aa11.32□□□□□ -0.6
CIITA-212ENST00000618207 SNX33Q8WV41 574 aa11.32□□□□□ -0.6
CIITA-212ENST00000618207 SRRQ9GZT4 340 aa11.32□□□□□ -0.6
CIITA-212ENST00000618207 ERVMER34-1Q9H9K5 563 aa11.32□□□□□ -0.6
CIITA-212ENST00000618207 ISYNA1Q9NPH2 558 aa11.32□□□□□ -0.6
CIITA-212ENST00000618207 IGKV3D-11A0A0A0MRZ8 115 aa11.31□□□□□ -0.6
CIITA-212ENST00000618207 TCRBV16S1A1N1A0A5B0 115 aa11.31□□□□□ -0.6
CIITA-212ENST00000618207 FAM25AB3EWG3 89 aa11.31□□□□□ -0.6
CIITA-212ENST00000618207 FAM25CB3EWG5 89 aa11.31□□□□□ -0.6
CIITA-212ENST00000618207 FAM25GB3EWG6 89 aa11.31□□□□□ -0.6
CIITA-212ENST00000618207 OR7A10O76100 309 aa11.31□□□□□ -0.6
CIITA-212ENST00000618207 GPANK1O95872 356 aa11.31□□□□□ -0.6
CIITA-212ENST00000618207 IGKV3-11P04433 115 aa11.31□□□□□ -0.6
CIITA-212ENST00000618207 FGF9P31371 208 aaPredicted RBP11.31□□□□□ -0.6
CIITA-212ENST00000618207 ETV6P41212 452 aa11.31□□□□□ -0.6
CIITA-212ENST00000618207 CDKN2AP42771 156 aaKnown RBP11.31□□□□□ -0.6
CIITA-212ENST00000618207 EGR4Q05215 589 aa11.31□□□□□ -0.6
CIITA-212ENST00000618207 LTBQ06643 244 aa11.31□□□□□ -0.6
CIITA-212ENST00000618207 IL18Q14116 193 aa11.31□□□□□ -0.6
CIITA-212ENST00000618207 PON3Q15166 354 aa11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms