RNA–Protein interactions for RNA: ENST00000617103.4

CLTCL1-209, Transcript of clathrin heavy chain like 1, humanhuman

TSL 1 (best)

Gene CLTCL1, Length 4,859 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-209ENST00000617103 TMEM72A0PK05 275 aa9.93□□□□□ -0.82
CLTCL1-209ENST00000617103 SOCS6O14544 535 aa9.93□□□□□ -0.82
CLTCL1-209ENST00000617103 HTR2CP28335 458 aa9.93□□□□□ -0.82
CLTCL1-209ENST00000617103 SEC61A1P61619 476 aaKnown RBP9.93□□□□□ -0.82
CLTCL1-209ENST00000617103 ACY1Q03154 408 aa9.93□□□□□ -0.82
CLTCL1-209ENST00000617103 MLC1Q15049 377 aa9.93□□□□□ -0.82
CLTCL1-209ENST00000617103 WBP2NLQ6ICG8 309 aa9.93□□□□□ -0.82
CLTCL1-209ENST00000617103 LPCAT3Q6P1A2 487 aa9.93□□□□□ -0.82
CLTCL1-209ENST00000617103 PAQR9Q6ZVX9 377 aa9.93□□□□□ -0.82
CLTCL1-209ENST00000617103 TNFSF12-TNFSF13A0A0A6YY99 330 aa9.92□□□□□ -0.82
CLTCL1-209ENST00000617103 C17orf113A0A1B0GUU1 675 aa9.92□□□□□ -0.82
CLTCL1-209ENST00000617103 EFCAB7A8K855 629 aa9.92□□□□□ -0.82
CLTCL1-209ENST00000617103 TNFSF12O43508 249 aa9.92□□□□□ -0.82
CLTCL1-209ENST00000617103 PAPLNO95428 1278 aa9.92□□□□□ -0.82
CLTCL1-209ENST00000617103 KLF8O95600 359 aaPredicted RBP9.92□□□□□ -0.82
CLTCL1-209ENST00000617103 ADRB1P08588 477 aa9.92□□□□□ -0.82
CLTCL1-209ENST00000617103 FPR3P25089 353 aa9.92□□□□□ -0.82
CLTCL1-209ENST00000617103 CRMP1Q14194 572 aa9.92□□□□□ -0.82
CLTCL1-209ENST00000617103 KIR2DS3Q14952 304 aa9.92□□□□□ -0.82
CLTCL1-209ENST00000617103 PAN3Q58A45 887 aaKnown RBP9.92□□□□□ -0.82
CLTCL1-209ENST00000617103 COX20Q5RI15 118 aa9.92□□□□□ -0.82
CLTCL1-209ENST00000617103 OR10K2Q6IF99 312 aa9.92□□□□□ -0.82
CLTCL1-209ENST00000617103 DIO2Q92813 273 aa9.92□□□□□ -0.82
CLTCL1-209ENST00000617103 TSACCQ96A04 125 aaPredicted RBP9.92□□□□□ -0.82
CLTCL1-209ENST00000617103 DTD2Q96FN9 168 aa9.92□□□□□ -0.82
CLTCL1-209ENST00000617103 MACROD1Q9BQ69 325 aa9.92□□□□□ -0.82
CLTCL1-209ENST00000617103 ALG12Q9BV10 488 aa9.92□□□□□ -0.82
CLTCL1-209ENST00000617103 A4GALTQ9NPC4 353 aa9.92□□□□□ -0.82
CLTCL1-209ENST00000617103 C1orf123Q9NWV4 160 aa9.92□□□□□ -0.82
CLTCL1-209ENST00000617103 COL2A1P02458 1487 aaPredicted RBP9.92□□□□□ -0.82
CLTCL1-209ENST00000617103 HIDE1A8MVS5 230 aa9.92□□□□□ -0.82
CLTCL1-209ENST00000617103 FTCDNL1E5RQL4 147 aa9.92□□□□□ -0.82
CLTCL1-209ENST00000617103 GJB3O75712 270 aa9.92□□□□□ -0.82
CLTCL1-209ENST00000617103 SCGB1D1O95968 90 aa9.92□□□□□ -0.82
CLTCL1-209ENST00000617103 MMP2P08253 660 aa9.92□□□□□ -0.82
CLTCL1-209ENST00000617103 GABRR1P24046 479 aa9.92□□□□□ -0.82
CLTCL1-209ENST00000617103 PDZK1IP1Q13113 114 aa9.92□□□□□ -0.82
CLTCL1-209ENST00000617103 RPE65Q16518 533 aa9.92□□□□□ -0.82
CLTCL1-209ENST00000617103 SAXO2Q658L1 398 aa9.92□□□□□ -0.82
CLTCL1-209ENST00000617103 NDUFAF7Q7L592 441 aa9.92□□□□□ -0.82
CLTCL1-209ENST00000617103 PLPP5Q8NEB5 264 aa9.92□□□□□ -0.82
CLTCL1-209ENST00000617103 ZNF680Q8NEM1 530 aa9.92□□□□□ -0.82
CLTCL1-209ENST00000617103 FAM213BQ8TBF2 198 aa9.92□□□□□ -0.82
CLTCL1-209ENST00000617103 DCLRE1CQ96SD1 692 aaKnown RBP9.92□□□□□ -0.82
CLTCL1-209ENST00000617103 GABARAPL1Q9H0R8 117 aa9.92□□□□□ -0.82
CLTCL1-209ENST00000617103 OR52A5Q9H2C5 316 aa9.92□□□□□ -0.82
CLTCL1-209ENST00000617103 ANKRD19PQ9H560 264 aa9.92□□□□□ -0.82
CLTCL1-209ENST00000617103 CXorf36Q9H7Y0 433 aa9.92□□□□□ -0.82
CLTCL1-209ENST00000617103 TP53TG5Q9Y2B4 290 aa9.92□□□□□ -0.82
CLTCL1-209ENST00000617103 WIF1Q9Y5W5 379 aa9.92□□□□□ -0.82
CLTCL1-209ENST00000617103 NUP188Q5SRE5 1749 aa9.92□□□□□ -0.82
CLTCL1-209ENST00000617103 OR52A4PA6NMU1 304 aa9.92□□□□□ -0.82
CLTCL1-209ENST00000617103 SPI1P17947 270 aa9.92□□□□□ -0.82
CLTCL1-209ENST00000617103 SELENBP1Q13228 472 aa9.92□□□□□ -0.82
CLTCL1-209ENST00000617103 TECPR1Q7Z6L1 1165 aa9.92□□□□□ -0.82
CLTCL1-209ENST00000617103 OR52R1Q8NGF1 315 aa9.92□□□□□ -0.82
CLTCL1-209ENST00000617103 OR6T1Q8NGN1 323 aa9.92□□□□□ -0.82
CLTCL1-209ENST00000617103 OR4Q3Q8NH05 313 aa9.92□□□□□ -0.82
CLTCL1-209ENST00000617103 CAPNS2Q96L46 248 aa9.92□□□□□ -0.82
CLTCL1-209ENST00000617103 LPAR4Q99677 370 aa9.92□□□□□ -0.82
CLTCL1-209ENST00000617103 SLC6A20Q9NP91 592 aa9.92□□□□□ -0.82
CLTCL1-209ENST00000617103 SAGE1Q9NXZ1 904 aa9.92□□□□□ -0.82
CLTCL1-209ENST00000617103 D6RAR5 112 aa9.91□□□□□ -0.82
CLTCL1-209ENST00000617103 MSTNO14793 375 aa9.91□□□□□ -0.82
CLTCL1-209ENST00000617103 LDB3O75112 727 aa9.91□□□□□ -0.82
CLTCL1-209ENST00000617103 CFIP05156 583 aa9.91□□□□□ -0.82
CLTCL1-209ENST00000617103 MTHFD2P13995 350 aa9.91□□□□□ -0.82
CLTCL1-209ENST00000617103 CPMP14384 443 aa9.91□□□□□ -0.82
CLTCL1-209ENST00000617103 FOXK2Q01167 660 aa9.91□□□□□ -0.82
CLTCL1-209ENST00000617103 PRDX1Q06830 199 aaKnown RBP9.91□□□□□ -0.82
CLTCL1-209ENST00000617103 EXOSC6Q5RKV6 272 aaKnown RBP9.91□□□□□ -0.82
CLTCL1-209ENST00000617103 HEPHL1Q6MZM0 1159 aa9.91□□□□□ -0.82
CLTCL1-209ENST00000617103 FBXW12Q6X9E4 464 aa9.91□□□□□ -0.82
CLTCL1-209ENST00000617103 SLCO4C1Q6ZQN7 724 aa9.91□□□□□ -0.82
CLTCL1-209ENST00000617103 OR56B1Q8NGI3 324 aa9.91□□□□□ -0.82
CLTCL1-209ENST00000617103 RBMXL1Q96E39 390 aaKnown RBP9.91□□□□□ -0.82
CLTCL1-209ENST00000617103 KATNB1Q9BVA0 655 aa9.91□□□□□ -0.82
CLTCL1-209ENST00000617103 KLF16Q9BXK1 252 aaPredicted RBP9.91□□□□□ -0.82
CLTCL1-209ENST00000617103 GCM1Q9NP62 436 aa9.91□□□□□ -0.82
CLTCL1-209ENST00000617103 A0A1W2PPV4 95 aa9.91□□□□□ -0.82
CLTCL1-209ENST00000617103 AGAP14A8MT82 685 aa9.91□□□□□ -0.82
CLTCL1-209ENST00000617103 IMPA1P29218 277 aa9.91□□□□□ -0.82
CLTCL1-209ENST00000617103 SRP9P49458 86 aaKnown RBP9.91□□□□□ -0.82
CLTCL1-209ENST00000617103 NDUFA6P56556 154 aa9.91□□□□□ -0.82
CLTCL1-209ENST00000617103 HHEXQ03014 270 aa9.91□□□□□ -0.82
CLTCL1-209ENST00000617103 AQP6Q13520 282 aa9.91□□□□□ -0.82
CLTCL1-209ENST00000617103 COL9A2Q14055 689 aaPredicted RBP9.91□□□□□ -0.82
CLTCL1-209ENST00000617103 EXOSC7Q15024 291 aaKnown RBP9.91□□□□□ -0.82
CLTCL1-209ENST00000617103 DEFB110Q30KQ9 67 aa9.91□□□□□ -0.82
CLTCL1-209ENST00000617103 SYT14P1Q58G82 188 aa9.91□□□□□ -0.82
CLTCL1-209ENST00000617103 PGBD5Q8N414 524 aa9.91□□□□□ -0.82
CLTCL1-209ENST00000617103 OR2A12Q8NGT7 310 aa9.91□□□□□ -0.82
CLTCL1-209ENST00000617103 OR10Z1Q8NGY1 313 aa9.91□□□□□ -0.82
CLTCL1-209ENST00000617103 YIPF5Q969M3 257 aa9.91□□□□□ -0.82
CLTCL1-209ENST00000617103 YIPF6Q96EC8 236 aa9.91□□□□□ -0.82
CLTCL1-209ENST00000617103 TNFRSF13CQ96RJ3 184 aa9.91□□□□□ -0.82
CLTCL1-209ENST00000617103 CRB3Q9BUF7 120 aa9.91□□□□□ -0.82
CLTCL1-209ENST00000617103 MCOLN1Q9GZU1 580 aa9.91□□□□□ -0.82
CLTCL1-209ENST00000617103 LIN7BQ9HAP6 207 aa9.91□□□□□ -0.82
CLTCL1-209ENST00000617103 ZNF629Q9UEG4 869 aaPredicted RBP9.91□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms