RNA–Protein interactions for RNA: ENST00000616288.4

PPP4R3B-205, Transcript of protein phosphatase 4 regulatory subunit 3B, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PPP4R3B, Length 4,310 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R3B-205ENST00000616288 ARHGAP11AQ6P4F7 1023 aa12.59□□□□□ -0.39
PPP4R3B-205ENST00000616288 KLHL24Q6TFL4 600 aa12.59□□□□□ -0.39
PPP4R3B-205ENST00000616288 MEPCEQ7L2J0 689 aaKnown RBP12.59□□□□□ -0.39
PPP4R3B-205ENST00000616288 OR6K3Q8NGY3 331 aa12.59□□□□□ -0.39
PPP4R3B-205ENST00000616288 KLK6Q92876 244 aa12.59□□□□□ -0.39
PPP4R3B-205ENST00000616288 SLC6A16Q9GZN6 736 aa12.59□□□□□ -0.39
PPP4R3B-205ENST00000616288 AUP1Q9Y679 476 aa12.59□□□□□ -0.39
PPP4R3B-205ENST00000616288 HPP00738 406 aa12.59□□□□□ -0.39
PPP4R3B-205ENST00000616288 IFNA21P01568 189 aa12.59□□□□□ -0.39
PPP4R3B-205ENST00000616288 RAB40ALP0C0E4 278 aa12.59□□□□□ -0.39
PPP4R3B-205ENST00000616288 CDK2P24941 298 aa12.59□□□□□ -0.39
PPP4R3B-205ENST00000616288 TAGLN2P37802 199 aaKnown RBP12.59□□□□□ -0.39
PPP4R3B-205ENST00000616288 CSNK1DP48730 415 aa12.59□□□□□ -0.39
PPP4R3B-205ENST00000616288 CSRP3P50461 194 aa12.59□□□□□ -0.39
PPP4R3B-205ENST00000616288 LIM2P55344 173 aa12.59□□□□□ -0.39
PPP4R3B-205ENST00000616288 PPIAP62937 165 aaKnown RBP12.59□□□□□ -0.39
PPP4R3B-205ENST00000616288 KIAA0040Q15053 153 aa12.59□□□□□ -0.39
PPP4R3B-205ENST00000616288 RAB40AQ8WXH6 277 aa12.59□□□□□ -0.39
PPP4R3B-205ENST00000616288 SLCO1C1Q9NYB5 712 aa12.59□□□□□ -0.39
PPP4R3B-205ENST00000616288 C17orf102A2RUQ5 167 aa12.59□□□□□ -0.39
PPP4R3B-205ENST00000616288 SGSHP51688 502 aa12.59□□□□□ -0.39
PPP4R3B-205ENST00000616288 TGIF1Q15583 401 aa12.59□□□□□ -0.39
PPP4R3B-205ENST00000616288 PAQR9Q6ZVX9 377 aa12.59□□□□□ -0.39
PPP4R3B-205ENST00000616288 CCDC116Q8IYX3 515 aa12.59□□□□□ -0.39
PPP4R3B-205ENST00000616288 ARL6IP6Q8N6S5 226 aa12.59□□□□□ -0.39
PPP4R3B-205ENST00000616288 ZNF283Q8N7M2 679 aa12.59□□□□□ -0.39
PPP4R3B-205ENST00000616288 C15orf54Q8N8G6 183 aa12.59□□□□□ -0.39
PPP4R3B-205ENST00000616288 OR6T1Q8NGN1 323 aa12.59□□□□□ -0.39
PPP4R3B-205ENST00000616288 OR5P2Q8WZ92 322 aa12.59□□□□□ -0.39
PPP4R3B-205ENST00000616288 PNPLA2Q96AD5 504 aa12.59□□□□□ -0.39
PPP4R3B-205ENST00000616288 JSRP1Q96MG2 331 aaPredicted RBP12.59□□□□□ -0.39
PPP4R3B-205ENST00000616288 AIF1LQ9BQI0 150 aa12.59□□□□□ -0.39
PPP4R3B-205ENST00000616288 GGACTQ9BVM4 153 aa12.59□□□□□ -0.39
PPP4R3B-205ENST00000616288 XRN2Q9H0D6 950 aaKnown RBP eCLIP12.59□□□□□ -0.39
PPP4R3B-205ENST00000616288 TREM2Q9NZC2 230 aa12.59□□□□□ -0.39
PPP4R3B-205ENST00000616288 CBLCQ9ULV8 474 aa12.59□□□□□ -0.39
PPP4R3B-205ENST00000616288 MED31Q9Y3C7 131 aa12.59□□□□□ -0.39
PPP4R3B-205ENST00000616288 LSM5Q9Y4Y9 91 aaKnown RBP12.59□□□□□ -0.39
PPP4R3B-205ENST00000616288 CSAG2Q9Y5P2 127 aa12.59□□□□□ -0.39
PPP4R3B-205ENST00000616288 CCDC88CQ9P219 2028 aa12.59□□□□□ -0.39
PPP4R3B-205ENST00000616288 IGHA2P01877 340 aa12.58□□□□□ -0.39
PPP4R3B-205ENST00000616288 HSD17B7P56937 341 aa12.58□□□□□ -0.39
PPP4R3B-205ENST00000616288 CYCSP99999 105 aaKnown RBP12.58□□□□□ -0.39
PPP4R3B-205ENST00000616288 PJVKQ0ZLH3 352 aa12.58□□□□□ -0.39
PPP4R3B-205ENST00000616288 KDF1Q8NAX2 398 aaPredicted RBP12.58□□□□□ -0.39
PPP4R3B-205ENST00000616288 SAGE1Q9NXZ1 904 aa12.58□□□□□ -0.39
PPP4R3B-205ENST00000616288 NME7Q9Y5B8 376 aa12.58□□□□□ -0.39
PPP4R3B-205ENST00000616288 WIF1Q9Y5W5 379 aa12.58□□□□□ -0.39
PPP4R3B-205ENST00000616288 TEX13DA0A0J9YY54 714 aaPredicted RBP12.58□□□□□ -0.4
PPP4R3B-205ENST00000616288 CCDC85CA6NKD9 419 aa12.58□□□□□ -0.4
PPP4R3B-205ENST00000616288 FRKP42685 505 aaPredicted RBP12.58□□□□□ -0.4
PPP4R3B-205ENST00000616288 F2RL1P55085 397 aa12.58□□□□□ -0.4
PPP4R3B-205ENST00000616288 LMNTD1Q8N9Z9 388 aa12.58□□□□□ -0.4
PPP4R3B-205ENST00000616288 FUBP3Q96I24 572 aaKnown RBP eCLIP12.58□□□□□ -0.4
PPP4R3B-205ENST00000616288 RASL12Q9NYN1 266 aa12.58□□□□□ -0.4
PPP4R3B-205ENST00000616288 FBXO4Q9UKT5 387 aa12.58□□□□□ -0.4
PPP4R3B-205ENST00000616288 ZNF726A6NNF4 738 aa12.58□□□□□ -0.4
PPP4R3B-205ENST00000616288 NME2P1O60361 137 aa12.58□□□□□ -0.4
PPP4R3B-205ENST00000616288 CRTAPO75718 401 aaPredicted RBP12.58□□□□□ -0.4
PPP4R3B-205ENST00000616288 DDTP30046 118 aa12.58□□□□□ -0.4
PPP4R3B-205ENST00000616288 CORO1AP31146 461 aaKnown RBP12.58□□□□□ -0.4
PPP4R3B-205ENST00000616288 MAPK8P45983 427 aa12.58□□□□□ -0.4
PPP4R3B-205ENST00000616288 ZNF155Q12901 538 aaPredicted RBP12.58□□□□□ -0.4
PPP4R3B-205ENST00000616288 SMAD4Q13485 552 aaKnown RBP12.58□□□□□ -0.4
PPP4R3B-205ENST00000616288 SLC9A3R2Q15599 337 aa12.58□□□□□ -0.4
PPP4R3B-205ENST00000616288 HENMT1Q5T8I9 393 aaKnown RBP12.58□□□□□ -0.4
PPP4R3B-205ENST00000616288 COL13A1Q5TAT6 717 aaPredicted RBP12.58□□□□□ -0.4
PPP4R3B-205ENST00000616288 ZNF626Q68DY1 528 aa12.58□□□□□ -0.4
PPP4R3B-205ENST00000616288 CHST14Q8NCH0 376 aa12.58□□□□□ -0.4
PPP4R3B-205ENST00000616288 PRRC1Q96M27 445 aa12.58□□□□□ -0.4
PPP4R3B-205ENST00000616288 REG4Q9BYZ8 158 aa12.58□□□□□ -0.4
PPP4R3B-205ENST00000616288 PLA2G12AQ9BZM1 189 aa12.58□□□□□ -0.4
PPP4R3B-205ENST00000616288 OR52D1Q9H346 318 aa12.58□□□□□ -0.4
PPP4R3B-205ENST00000616288 SLC25A19Q9HC21 320 aa12.58□□□□□ -0.4
PPP4R3B-205ENST00000616288 ADAP2Q9NPF8 381 aa12.58□□□□□ -0.4
PPP4R3B-205ENST00000616288 CA14Q9ULX7 337 aa12.58□□□□□ -0.4
PPP4R3B-205ENST00000616288 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP12.58□□□□□ -0.4
PPP4R3B-205ENST00000616288 LILRB5O75023 590 aa12.58□□□□□ -0.4
PPP4R3B-205ENST00000616288 PPP1R3DO95685 299 aa12.58□□□□□ -0.4
PPP4R3B-205ENST00000616288 PMS2P2O95744 297 aa12.58□□□□□ -0.4
PPP4R3B-205ENST00000616288 ZNF28P17035 718 aa12.58□□□□□ -0.4
PPP4R3B-205ENST00000616288 HTR1FP30939 366 aa12.58□□□□□ -0.4
PPP4R3B-205ENST00000616288 NRG3P56975 720 aa12.58□□□□□ -0.4
PPP4R3B-205ENST00000616288 HMGN3Q15651 99 aa12.58□□□□□ -0.4
PPP4R3B-205ENST00000616288 ATG101Q9BSB4 218 aa12.58□□□□□ -0.4
PPP4R3B-205ENST00000616288 HINT3Q9NQE9 182 aaKnown RBP12.58□□□□□ -0.4
PPP4R3B-205ENST00000616288 DUSP22Q9NRW4 184 aa12.58□□□□□ -0.4
PPP4R3B-205ENST00000616288 A0A087WV62 115 aa12.57□□□□□ -0.4
PPP4R3B-205ENST00000616288 FKTNO75072 461 aa12.57□□□□□ -0.4
PPP4R3B-205ENST00000616288 GPR32O75388 356 aa12.57□□□□□ -0.4
PPP4R3B-205ENST00000616288 HOXB5P09067 269 aa12.57□□□□□ -0.4
PPP4R3B-205ENST00000616288 RAB4AP20338 218 aa12.57□□□□□ -0.4
PPP4R3B-205ENST00000616288 ACRV1P26436 265 aa12.57□□□□□ -0.4
PPP4R3B-205ENST00000616288 MPIP34949 423 aa12.57□□□□□ -0.4
PPP4R3B-205ENST00000616288 TSPAN31Q12999 210 aa12.57□□□□□ -0.4
PPP4R3B-205ENST00000616288 POMZP3Q6PJE2 187 aa12.57□□□□□ -0.4
PPP4R3B-205ENST00000616288 Q6ZRG5 221 aa12.57□□□□□ -0.4
PPP4R3B-205ENST00000616288 TMEM173Q86WV6 379 aaPredicted RBP12.57□□□□□ -0.4
PPP4R3B-205ENST00000616288 FAM181AQ8N9Y4 354 aa12.57□□□□□ -0.4
PPP4R3B-205ENST00000616288 SLC30A7Q8NEW0 376 aa12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms