RNA–Protein interactions for RNA: ENST00000614944.4

VPS11-206, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

TSL 2 BASIC

Gene VPS11, Length 3,388 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-206ENST00000614944 ZFPL1O95159 310 aa8.12□□□□□ -1.11
VPS11-206ENST00000614944 SYPP08247 313 aa8.12□□□□□ -1.11
VPS11-206ENST00000614944 HIST1H1BP16401 226 aaKnown RBP8.12□□□□□ -1.11
VPS11-206ENST00000614944 S100A11P31949 105 aa8.12□□□□□ -1.11
VPS11-206ENST00000614944 THBS4P35443 961 aa8.12□□□□□ -1.11
VPS11-206ENST00000614944 CSNK1EP49674 416 aaKnown RBP8.12□□□□□ -1.11
VPS11-206ENST00000614944 TRA2AQ13595 282 aaKnown RBP eCLIP8.12□□□□□ -1.11
VPS11-206ENST00000614944 CLINT1Q14677 625 aa8.12□□□□□ -1.11
VPS11-206ENST00000614944 SF1Q15637 639 aaKnown RBP8.12□□□□□ -1.11
VPS11-206ENST00000614944 VPS26BQ4G0F5 336 aa8.12□□□□□ -1.11
VPS11-206ENST00000614944 YOD1Q5VVQ6 348 aaPredicted RBP8.12□□□□□ -1.11
VPS11-206ENST00000614944 ZNF385CQ66K41 422 aaPredicted RBP8.12□□□□□ -1.11
VPS11-206ENST00000614944 FIGLAQ6QHK4 219 aa8.12□□□□□ -1.11
VPS11-206ENST00000614944 LDLRAD3Q86YD5 345 aa8.12□□□□□ -1.11
VPS11-206ENST00000614944 SVBPQ8N300 66 aa8.12□□□□□ -1.11
VPS11-206ENST00000614944 GPR137CQ8N3F9 429 aa8.12□□□□□ -1.11
VPS11-206ENST00000614944 PRRX2Q99811 253 aa8.12□□□□□ -1.11
VPS11-206ENST00000614944 PIGQQ9BRB3 760 aa8.12□□□□□ -1.11
VPS11-206ENST00000614944 CCDC167Q9P0B6 97 aa8.12□□□□□ -1.11
VPS11-206ENST00000614944 PCDHA9Q9Y5H5 950 aa8.12□□□□□ -1.11
VPS11-206ENST00000614944 A0A1B0GVT2 93 aa8.12□□□□□ -1.11
VPS11-206ENST00000614944 A0A1B0GW55 424 aa8.12□□□□□ -1.11
VPS11-206ENST00000614944 TLCD2A6NGC4 264 aa8.12□□□□□ -1.11
VPS11-206ENST00000614944 TEX46H3BTG2 121 aa8.12□□□□□ -1.11
VPS11-206ENST00000614944 H7BY64 318 aa8.12□□□□□ -1.11
VPS11-206ENST00000614944 PLPP1O14494 284 aa8.12□□□□□ -1.11
VPS11-206ENST00000614944 C6orf47O95873 294 aa8.12□□□□□ -1.11
VPS11-206ENST00000614944 LDLRP01130 860 aa8.12□□□□□ -1.11
VPS11-206ENST00000614944 DUX4L2P0CJ85 424 aa8.12□□□□□ -1.11
VPS11-206ENST00000614944 DUX4L3P0CJ86 424 aa8.12□□□□□ -1.11
VPS11-206ENST00000614944 DUX4L4P0CJ87 422 aa8.12□□□□□ -1.11
VPS11-206ENST00000614944 DUX4L5P0CJ88 424 aa8.12□□□□□ -1.11
VPS11-206ENST00000614944 DUX4L6P0CJ89 424 aa8.12□□□□□ -1.11
VPS11-206ENST00000614944 DUX4L7P0CJ90 424 aa8.12□□□□□ -1.11
VPS11-206ENST00000614944 CYP4B1P13584 511 aa8.12□□□□□ -1.11
VPS11-206ENST00000614944 FOLR2P14207 255 aa8.12□□□□□ -1.11
VPS11-206ENST00000614944 PSMB5P28074 263 aa8.12□□□□□ -1.11
VPS11-206ENST00000614944 MAP2K3P46734 347 aa8.12□□□□□ -1.11
VPS11-206ENST00000614944 GABRA4P48169 554 aa8.12□□□□□ -1.11
VPS11-206ENST00000614944 CTU2Q2VPK5 515 aaKnown RBP8.12□□□□□ -1.11
VPS11-206ENST00000614944 PLA2G2CQ5R387 149 aa8.12□□□□□ -1.11
VPS11-206ENST00000614944 SAXO2Q658L1 398 aa8.12□□□□□ -1.11
VPS11-206ENST00000614944 OR4C11Q6IEV9 310 aa8.12□□□□□ -1.11
VPS11-206ENST00000614944 FBXO42Q6P3S6 717 aa8.12□□□□□ -1.11
VPS11-206ENST00000614944 QSOX2Q6ZRP7 698 aa8.12□□□□□ -1.11
VPS11-206ENST00000614944 UBE3DQ7Z6J8 389 aa8.12□□□□□ -1.11
VPS11-206ENST00000614944 PTRH1Q86Y79 214 aaKnown RBP8.12□□□□□ -1.11
VPS11-206ENST00000614944 SLC25A45Q8N413 288 aa8.12□□□□□ -1.11
VPS11-206ENST00000614944 OIT3Q8WWZ8 545 aa8.12□□□□□ -1.11
VPS11-206ENST00000614944 AP3S1Q92572 193 aa8.12□□□□□ -1.11
VPS11-206ENST00000614944 LRRC58Q96CX6 371 aa8.12□□□□□ -1.11
VPS11-206ENST00000614944 MS4A6EQ96DS6 147 aa8.12□□□□□ -1.11
VPS11-206ENST00000614944 ITCHQ96J02 903 aa8.12□□□□□ -1.11
VPS11-206ENST00000614944 TEX37Q96LM6 180 aa8.12□□□□□ -1.11
VPS11-206ENST00000614944 PRAP1Q96NZ9 151 aa8.12□□□□□ -1.11
VPS11-206ENST00000614944 ZFYVE21Q9BQ24 234 aa8.12□□□□□ -1.11
VPS11-206ENST00000614944 C3orf14Q9HBI5 128 aa8.12□□□□□ -1.11
VPS11-206ENST00000614944 LYRM4Q9HD34 91 aa8.12□□□□□ -1.11
VPS11-206ENST00000614944 LHX9Q9NQ69 397 aa8.12□□□□□ -1.11
VPS11-206ENST00000614944 DUX4Q9UBX2 424 aa8.12□□□□□ -1.11
VPS11-206ENST00000614944 TPRKBQ9Y3C4 175 aa8.12□□□□□ -1.11
VPS11-206ENST00000614944 TECTAO75443 2155 aa8.12□□□□□ -1.11
VPS11-206ENST00000614944 FAM240BA0A1B0GVZ2 78 aa8.11□□□□□ -1.11
VPS11-206ENST00000614944 A0A1W2PN81 502 aa8.11□□□□□ -1.11
VPS11-206ENST00000614944 ISM1B1AKI9 464 aa8.11□□□□□ -1.11
VPS11-206ENST00000614944 SLC25A17O43808 307 aa8.11□□□□□ -1.11
VPS11-206ENST00000614944 XPNPEP2O43895 674 aa8.11□□□□□ -1.11
VPS11-206ENST00000614944 PRAMEF2O60811 474 aa8.11□□□□□ -1.11
VPS11-206ENST00000614944 CTNSO60931 367 aa8.11□□□□□ -1.11
VPS11-206ENST00000614944 SCN2BO60939 215 aa8.11□□□□□ -1.11
VPS11-206ENST00000614944 FURINP09958 794 aa8.11□□□□□ -1.11
VPS11-206ENST00000614944 PPIBP23284 216 aaKnown RBP8.11□□□□□ -1.11
VPS11-206ENST00000614944 CHRNA7P36544 502 aa8.11□□□□□ -1.11
VPS11-206ENST00000614944 FCN2Q15485 313 aa8.11□□□□□ -1.11
VPS11-206ENST00000614944 GUCA2BQ16661 112 aa8.11□□□□□ -1.11
VPS11-206ENST00000614944 ABHD17CQ6PCB6 329 aa8.11□□□□□ -1.11
VPS11-206ENST00000614944 CLEC9AQ6UXN8 241 aa8.11□□□□□ -1.11
VPS11-206ENST00000614944 PDZD9Q8IXQ8 264 aa8.11□□□□□ -1.11
VPS11-206ENST00000614944 C19orf18Q8NEA5 215 aa8.11□□□□□ -1.11
VPS11-206ENST00000614944 THAP6Q8TBB0 222 aa8.11□□□□□ -1.11
VPS11-206ENST00000614944 ADAMTS18Q8TE60 1221 aa8.11□□□□□ -1.11
VPS11-206ENST00000614944 MTERF1Q99551 399 aaKnown RBP8.11□□□□□ -1.11
VPS11-206ENST00000614944 TXN2Q99757 166 aa8.11□□□□□ -1.11
VPS11-206ENST00000614944 KCNS3Q9BQ31 491 aa8.11□□□□□ -1.11
VPS11-206ENST00000614944 RNF6Q9Y252 685 aa8.11□□□□□ -1.11
VPS11-206ENST00000614944 NEUROG3Q9Y4Z2 214 aa8.11□□□□□ -1.11
VPS11-206ENST00000614944 CLCA3PQ9Y6N3 262 aa8.11□□□□□ -1.11
VPS11-206ENST00000614944 SZT2Q5T011 3432 aa8.11□□□□□ -1.11
VPS11-206ENST00000614944 NR5A2O00482 541 aa8.11□□□□□ -1.11
VPS11-206ENST00000614944 OR1F1O43749 312 aa8.11□□□□□ -1.11
VPS11-206ENST00000614944 GPR37L1O60883 481 aa8.11□□□□□ -1.11
VPS11-206ENST00000614944 FADS2O95864 444 aaKnown RBP8.11□□□□□ -1.11
VPS11-206ENST00000614944 ANXA4P09525 319 aaPredicted RBP8.11□□□□□ -1.11
VPS11-206ENST00000614944 ENGP17813 658 aa8.11□□□□□ -1.11
VPS11-206ENST00000614944 ZNF10P21506 573 aaPredicted RBP8.11□□□□□ -1.11
VPS11-206ENST00000614944 WNT3P56703 355 aa8.11□□□□□ -1.11
VPS11-206ENST00000614944 CLDN20P56880 219 aa8.11□□□□□ -1.11
VPS11-206ENST00000614944 VAMP2P63027 116 aa8.11□□□□□ -1.11
VPS11-206ENST00000614944 PDZK1IP1Q13113 114 aa8.11□□□□□ -1.11
VPS11-206ENST00000614944 LAPTM4AQ15012 233 aa8.11□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 68.2 ms