RNA–Protein interactions for RNA: ENST00000613795.4

CLCN3-211, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 5 BASIC

Gene CLCN3, Length 5,874 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-211ENST00000613795 MR1Q95460 341 aa6.42□□□□□ -1.38
CLCN3-211ENST00000613795 SLCO4A1Q96BD0 722 aa6.42□□□□□ -1.38
CLCN3-211ENST00000613795 TRAF4Q9BUZ4 470 aaPredicted RBP6.42□□□□□ -1.38
CLCN3-211ENST00000613795 GABARAPL3Q9BY60 117 aa6.42□□□□□ -1.38
CLCN3-211ENST00000613795 SLC25A18Q9H1K4 315 aa6.42□□□□□ -1.38
CLCN3-211ENST00000613795 FN3KRPQ9HA64 309 aa6.42□□□□□ -1.38
CLCN3-211ENST00000613795 TAF9BQ9HBM6 251 aa6.42□□□□□ -1.38
CLCN3-211ENST00000613795 CHRNA9Q9UGM1 479 aa6.42□□□□□ -1.38
CLCN3-211ENST00000613795 A0A0D9SEW6 157 aa6.42□□□□□ -1.38
CLCN3-211ENST00000613795 LGALS8O00214 317 aa6.42□□□□□ -1.38
CLCN3-211ENST00000613795 FOXE1O00358 373 aaPredicted RBP6.42□□□□□ -1.38
CLCN3-211ENST00000613795 YY2O15391 372 aa6.42□□□□□ -1.38
CLCN3-211ENST00000613795 B4GALT2O60909 372 aa6.42□□□□□ -1.38
CLCN3-211ENST00000613795 SDC1P18827 310 aa6.42□□□□□ -1.38
CLCN3-211ENST00000613795 MAKP20794 623 aa6.42□□□□□ -1.38
CLCN3-211ENST00000613795 RFX2P48378 723 aa6.42□□□□□ -1.38
CLCN3-211ENST00000613795 CLDN6P56747 220 aa6.42□□□□□ -1.38
CLCN3-211ENST00000613795 TAF9Q16594 264 aa6.42□□□□□ -1.38
CLCN3-211ENST00000613795 VASNQ6EMK4 673 aa6.42□□□□□ -1.38
CLCN3-211ENST00000613795 HEPHL1Q6MZM0 1159 aa6.42□□□□□ -1.38
CLCN3-211ENST00000613795 ZNF808Q8N4W9 903 aaPredicted RBP6.42□□□□□ -1.38
CLCN3-211ENST00000613795 CLDN19Q8N6F1 224 aa6.42□□□□□ -1.38
CLCN3-211ENST00000613795 OR52I1Q8NGK6 324 aa6.42□□□□□ -1.38
CLCN3-211ENST00000613795 CREB3L4Q8TEY5 395 aa6.42□□□□□ -1.38
CLCN3-211ENST00000613795 HPSE2Q8WWQ2 592 aa6.42□□□□□ -1.38
CLCN3-211ENST00000613795 MMABQ96EY8 250 aaPredicted RBP6.42□□□□□ -1.38
CLCN3-211ENST00000613795 APIPQ96GX9 242 aa6.42□□□□□ -1.38
CLCN3-211ENST00000613795 SEC61A2Q9H9S3 476 aa6.42□□□□□ -1.38
CLCN3-211ENST00000613795 MAST2Q6P0Q8 1798 aa6.41□□□□□ -1.38
CLCN3-211ENST00000613795 DNAJC25-GNG10A0A024R161 153 aa6.41□□□□□ -1.38
CLCN3-211ENST00000613795 A0A0G2JN53 185 aa6.41□□□□□ -1.38
CLCN3-211ENST00000613795 VSTM2BA6NLU5 285 aa6.41□□□□□ -1.38
CLCN3-211ENST00000613795 LAMTOR5O43504 91 aa6.41□□□□□ -1.38
CLCN3-211ENST00000613795 CLEC2LP0C7M8 214 aa6.41□□□□□ -1.38
CLCN3-211ENST00000613795 RAB5AP20339 215 aa6.41□□□□□ -1.38
CLCN3-211ENST00000613795 RPS15P62841 145 aaKnown RBP6.41□□□□□ -1.38
CLCN3-211ENST00000613795 DLX2Q07687 328 aaPredicted RBP6.41□□□□□ -1.38
CLCN3-211ENST00000613795 TSPAN31Q12999 210 aa6.41□□□□□ -1.38
CLCN3-211ENST00000613795 IQCJQ1A5X6 159 aa6.41□□□□□ -1.38
CLCN3-211ENST00000613795 CATSPEREQ5SY80 951 aa6.41□□□□□ -1.38
CLCN3-211ENST00000613795 ETFRF1Q6IPR1 90 aa6.41□□□□□ -1.38
CLCN3-211ENST00000613795 STEAP1BQ6NZ63 245 aa6.41□□□□□ -1.38
CLCN3-211ENST00000613795 TBPL2Q6SJ96 375 aa6.41□□□□□ -1.38
CLCN3-211ENST00000613795 C17orf99Q6UX52 265 aa6.41□□□□□ -1.38
CLCN3-211ENST00000613795 TTLL10Q6ZVT0 673 aa6.41□□□□□ -1.38
CLCN3-211ENST00000613795 MDGA2Q7Z553 956 aa6.41□□□□□ -1.38
CLCN3-211ENST00000613795 FAM58AQ8N1B3 248 aa6.41□□□□□ -1.38
CLCN3-211ENST00000613795 OR4C5Q8NGB2 326 aa6.41□□□□□ -1.38
CLCN3-211ENST00000613795 ABHD4Q8TB40 342 aa6.41□□□□□ -1.38
CLCN3-211ENST00000613795 CHAC2Q8WUX2 184 aa6.41□□□□□ -1.38
CLCN3-211ENST00000613795 SLC39A7Q92504 469 aa6.41□□□□□ -1.38
CLCN3-211ENST00000613795 RSC1A1Q92681 617 aa6.41□□□□□ -1.38
CLCN3-211ENST00000613795 PAPOLGQ9BWT3 736 aaKnown RBP6.41□□□□□ -1.38
CLCN3-211ENST00000613795 AMBRA1Q9C0C7 1298 aa6.41□□□□□ -1.38
CLCN3-211ENST00000613795 FZD3Q9NPG1 666 aa6.41□□□□□ -1.38
CLCN3-211ENST00000613795 SNX11Q9Y5W9 270 aa6.41□□□□□ -1.38
CLCN3-211ENST00000613795 KIR2DS5A0A0G2JLQ3 304 aa6.41□□□□□ -1.38
CLCN3-211ENST00000613795 A0A0G2JNG1 304 aa6.41□□□□□ -1.38
CLCN3-211ENST00000613795 KIR2DS3K7RE56 304 aa6.41□□□□□ -1.38
CLCN3-211ENST00000613795 JTBO76095 146 aa6.41□□□□□ -1.38
CLCN3-211ENST00000613795 STK17BO94768 372 aa6.41□□□□□ -1.38
CLCN3-211ENST00000613795 RD3LP0DJH9 198 aa6.41□□□□□ -1.38
CLCN3-211ENST00000613795 NQO2P16083 231 aa6.41□□□□□ -1.38
CLCN3-211ENST00000613795 HNF1AP20823 631 aa6.41□□□□□ -1.38
CLCN3-211ENST00000613795 GABRA3P34903 492 aa6.41□□□□□ -1.38
CLCN3-211ENST00000613795 MRPL19P49406 292 aaKnown RBP6.41□□□□□ -1.38
CLCN3-211ENST00000613795 EVX1P49640 407 aa6.41□□□□□ -1.38
CLCN3-211ENST00000613795 RAG2P55895 527 aa6.41□□□□□ -1.38
CLCN3-211ENST00000613795 RAB31Q13636 194 aa6.41□□□□□ -1.38
CLCN3-211ENST00000613795 KIR2DS5Q14953 304 aa6.41□□□□□ -1.38
CLCN3-211ENST00000613795 VAMP3Q15836 100 aa6.41□□□□□ -1.38
CLCN3-211ENST00000613795 TAZQ16635 292 aa6.41□□□□□ -1.38
CLCN3-211ENST00000613795 LRRC73Q5JTD7 316 aa6.41□□□□□ -1.38
CLCN3-211ENST00000613795 MLIPQ5VWP3 458 aa6.41□□□□□ -1.38
CLCN3-211ENST00000613795 LEG1Q6P5S2 330 aa6.41□□□□□ -1.38
CLCN3-211ENST00000613795 RANBP10Q6VN20 620 aa6.41□□□□□ -1.38
CLCN3-211ENST00000613795 HTR3DQ70Z44 454 aa6.41□□□□□ -1.38
CLCN3-211ENST00000613795 CMTM1Q8IZ96 169 aa6.41□□□□□ -1.38
CLCN3-211ENST00000613795 OR4K13Q8NH42 304 aa6.41□□□□□ -1.38
CLCN3-211ENST00000613795 IGSF8Q969P0 613 aa6.41□□□□□ -1.38
CLCN3-211ENST00000613795 WDFY2Q96P53 400 aa6.41□□□□□ -1.38
CLCN3-211ENST00000613795 MS4A4EQ96PG1 132 aa6.41□□□□□ -1.38
CLCN3-211ENST00000613795 MYADMQ96S97 322 aa6.41□□□□□ -1.38
CLCN3-211ENST00000613795 USB1Q9BQ65 265 aaKnown RBP6.41□□□□□ -1.38
CLCN3-211ENST00000613795 SLIRPQ9GZT3 109 aaKnown RBP6.41□□□□□ -1.38
CLCN3-211ENST00000613795 POMT1Q9Y6A1 747 aa6.41□□□□□ -1.38
CLCN3-211ENST00000613795 CSNK1G3Q9Y6M4 447 aa6.41□□□□□ -1.38
CLCN3-211ENST00000613795 PRAMEF26H0Y7S4 382 aa6.41□□□□□ -1.38
CLCN3-211ENST00000613795 GPR171O14626 319 aa6.41□□□□□ -1.38
CLCN3-211ENST00000613795 SURF4O15260 269 aa6.41□□□□□ -1.38
CLCN3-211ENST00000613795 BCL2L11O43521 198 aa6.41□□□□□ -1.38
CLCN3-211ENST00000613795 PPP1R3DO95685 299 aa6.41□□□□□ -1.38
CLCN3-211ENST00000613795 RRASP10301 218 aa6.41□□□□□ -1.38
CLCN3-211ENST00000613795 C6P13671 934 aa6.41□□□□□ -1.38
CLCN3-211ENST00000613795 SNRPEP62304 92 aaKnown RBP6.41□□□□□ -1.38
CLCN3-211ENST00000613795 RPP30P78346 268 aaKnown RBP6.41□□□□□ -1.38
CLCN3-211ENST00000613795 PIN1Q13526 163 aaPredicted RBP6.41□□□□□ -1.38
CLCN3-211ENST00000613795 RBM39Q14498 530 aaKnown RBP6.41□□□□□ -1.38
CLCN3-211ENST00000613795 ZNF74Q16587 644 aa6.41□□□□□ -1.38
CLCN3-211ENST00000613795 OXLD1Q5BKU9 147 aa6.41□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms