RNA–Protein interactions for RNA: ENST00000613788.1

CD48-203, Transcript of CD48 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD48, Length 1,500 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD48-203ENST00000613788 FAM57AQ8TBR7 257 aa13.19□□□□□ -0.3
CD48-203ENST00000613788 ZPLD1Q8TCW7 415 aa13.19□□□□□ -0.3
CD48-203ENST00000613788 LIPHQ8WWY8 451 aa13.19□□□□□ -0.3
CD48-203ENST00000613788 HIST1H2ACQ93077 130 aa13.19□□□□□ -0.3
CD48-203ENST00000613788 CPNE4Q96A23 557 aaPredicted RBP13.19□□□□□ -0.3
CD48-203ENST00000613788 DNAJA3Q96EY1 480 aa13.19□□□□□ -0.3
CD48-203ENST00000613788 FAM46AQ96IP4 442 aaKnown RBP13.19□□□□□ -0.3
CD48-203ENST00000613788 NAA11Q9BSU3 229 aaPredicted RBP13.19□□□□□ -0.3
CD48-203ENST00000613788 OSBPL10Q9BXB5 764 aa13.19□□□□□ -0.3
CD48-203ENST00000613788 ASPNQ9BXN1 380 aa13.19□□□□□ -0.3
CD48-203ENST00000613788 ZNF556Q9HAH1 456 aa13.19□□□□□ -0.3
CD48-203ENST00000613788 ALKBH4Q9NXW9 302 aa13.19□□□□□ -0.3
CD48-203ENST00000613788 ZNF229Q9UJW7 825 aa13.19□□□□□ -0.3
CD48-203ENST00000613788 CORINQ9Y5Q5 1042 aa13.19□□□□□ -0.3
CD48-203ENST00000613788 B8ZZF3 427 aa13.18□□□□□ -0.3
CD48-203ENST00000613788 PRRG2O14669 202 aa13.18□□□□□ -0.3
CD48-203ENST00000613788 SYNGR4O95473 234 aa13.18□□□□□ -0.3
CD48-203ENST00000613788 GASTP01350 101 aa13.18□□□□□ -0.3
CD48-203ENST00000613788 HOXD4P09016 255 aaPredicted RBP13.18□□□□□ -0.3
CD48-203ENST00000613788 SAGP10523 405 aaPredicted RBP13.18□□□□□ -0.3
CD48-203ENST00000613788 PRKACGP22612 351 aa13.18□□□□□ -0.3
CD48-203ENST00000613788 PTGER4P35408 488 aa13.18□□□□□ -0.3
CD48-203ENST00000613788 SLC9A3P48764 834 aa13.18□□□□□ -0.3
CD48-203ENST00000613788 LTBQ06643 244 aa13.18□□□□□ -0.3
CD48-203ENST00000613788 C19orf57Q0VDD7 668 aa13.18□□□□□ -0.3
CD48-203ENST00000613788 C3AR1Q16581 482 aa13.18□□□□□ -0.3
CD48-203ENST00000613788 ZNF770Q6IQ21 691 aaPredicted RBP13.18□□□□□ -0.3
CD48-203ENST00000613788 HS3ST5Q8IZT8 346 aa13.18□□□□□ -0.3
CD48-203ENST00000613788 OR9Q2Q8NGE9 314 aa13.18□□□□□ -0.3
CD48-203ENST00000613788 OR5M9Q8NGP3 310 aa13.18□□□□□ -0.3
CD48-203ENST00000613788 EME1Q96AY2 570 aa13.18□□□□□ -0.3
CD48-203ENST00000613788 MOGAT1Q96PD6 335 aa13.18□□□□□ -0.3
CD48-203ENST00000613788 FEVQ99581 238 aa13.18□□□□□ -0.3
CD48-203ENST00000613788 C9orf16Q9BUW7 83 aa13.18□□□□□ -0.3
CD48-203ENST00000613788 DGCR6LQ9BY27 220 aa13.18□□□□□ -0.3
CD48-203ENST00000613788 MCTS1Q9ULC4 181 aaKnown RBP13.18□□□□□ -0.3
CD48-203ENST00000613788 SAC3D1A6NKF1 404 aa13.18□□□□□ -0.3
CD48-203ENST00000613788 FIGNL2A6NMB9 653 aa13.18□□□□□ -0.3
CD48-203ENST00000613788 ZNHIT1O43257 154 aa13.18□□□□□ -0.3
CD48-203ENST00000613788 SLC19A2O60779 497 aa13.18□□□□□ -0.3
CD48-203ENST00000613788 WDR1O75083 606 aa13.18□□□□□ -0.3
CD48-203ENST00000613788 FZD7O75084 574 aa13.18□□□□□ -0.3
CD48-203ENST00000613788 ATP6V1G2O95670 118 aa13.18□□□□□ -0.3
CD48-203ENST00000613788 MAKP20794 623 aa13.18□□□□□ -0.3
CD48-203ENST00000613788 GSTM3P21266 225 aa13.18□□□□□ -0.3
CD48-203ENST00000613788 ENPP1P22413 925 aa13.18□□□□□ -0.3
CD48-203ENST00000613788 CBLP22681 906 aa13.18□□□□□ -0.3
CD48-203ENST00000613788 FPR3P25089 353 aa13.18□□□□□ -0.3
CD48-203ENST00000613788 GRPRP30550 384 aa13.18□□□□□ -0.3
CD48-203ENST00000613788 GPR4P46093 362 aa13.18□□□□□ -0.3
CD48-203ENST00000613788 AGFG1P52594 562 aaKnown RBP13.18□□□□□ -0.3
CD48-203ENST00000613788 COX10Q12887 443 aa13.18□□□□□ -0.3
CD48-203ENST00000613788 TSPAN31Q12999 210 aa13.18□□□□□ -0.3
CD48-203ENST00000613788 TAF11Q15544 211 aa13.18□□□□□ -0.3
CD48-203ENST00000613788 ANKDD1AQ495B1 522 aa13.18□□□□□ -0.3
CD48-203ENST00000613788 OTUD3Q5T2D3 398 aaPredicted RBP13.18□□□□□ -0.3
CD48-203ENST00000613788 ZNF585AQ6P3V2 769 aa13.18□□□□□ -0.3
CD48-203ENST00000613788 PAQR6Q6TCH4 344 aa13.18□□□□□ -0.3
CD48-203ENST00000613788 SLC46A3Q7Z3Q1 461 aa13.18□□□□□ -0.3
CD48-203ENST00000613788 OAFQ86UD1 273 aa13.18□□□□□ -0.3
CD48-203ENST00000613788 LSRQ86X29 649 aaPredicted RBP13.18□□□□□ -0.3
CD48-203ENST00000613788 SCAIQ8N9R8 606 aa13.18□□□□□ -0.3
CD48-203ENST00000613788 ATG16L2Q8NAA4 619 aa13.18□□□□□ -0.3
CD48-203ENST00000613788 DNAJC9Q8WXX5 260 aa13.18□□□□□ -0.3
CD48-203ENST00000613788 CIB1Q99828 191 aa13.18□□□□□ -0.3
CD48-203ENST00000613788 TUBA1CQ9BQE3 449 aa13.18□□□□□ -0.3
CD48-203ENST00000613788 PRRG4Q9BZD6 226 aa13.18□□□□□ -0.3
CD48-203ENST00000613788 PNPLA3Q9NST1 481 aa13.18□□□□□ -0.3
CD48-203ENST00000613788 MRPL39Q9NYK5 338 aaKnown RBP13.18□□□□□ -0.3
CD48-203ENST00000613788 KIF17Q9P2E2 1029 aa13.18□□□□□ -0.3
CD48-203ENST00000613788 NKX1-2Q9UD57 310 aaPredicted RBP13.18□□□□□ -0.3
CD48-203ENST00000613788 B3GALT5Q9Y2C3 310 aa13.18□□□□□ -0.3
CD48-203ENST00000613788 ZNF835Q9Y2P0 537 aa13.18□□□□□ -0.3
CD48-203ENST00000613788 MAGED1Q9Y5V3 778 aaPredicted RBP13.18□□□□□ -0.3
CD48-203ENST00000613788 ATRXP46100 2492 aa13.17□□□□□ -0.3
CD48-203ENST00000613788 ZNF407Q9C0G0 2248 aa13.17□□□□□ -0.3
CD48-203ENST00000613788 LRRN3E7EW58 273 aa13.17□□□□□ -0.3
CD48-203ENST00000613788 ADAP00813 363 aa13.17□□□□□ -0.3
CD48-203ENST00000613788 ASAH2BP0C7U1 165 aa13.17□□□□□ -0.3
CD48-203ENST00000613788 POU2F1P14859 743 aa13.17□□□□□ -0.3
CD48-203ENST00000613788 GSSP48637 474 aa13.17□□□□□ -0.3
CD48-203ENST00000613788 H3F3AP84243 136 aa13.17□□□□□ -0.3
CD48-203ENST00000613788 PMS2P3Q13401 168 aa13.17□□□□□ -0.3
CD48-203ENST00000613788 TRIP10Q15642 601 aa13.17□□□□□ -0.3
CD48-203ENST00000613788 Q6ZPB1 254 aaPredicted RBP13.17□□□□□ -0.3
CD48-203ENST00000613788 H1FNTQ75WM6 255 aaPredicted RBP13.17□□□□□ -0.3
CD48-203ENST00000613788 CD163Q86VB7 1156 aa13.17□□□□□ -0.3
CD48-203ENST00000613788 LRRC17Q8N6Y2 441 aa13.17□□□□□ -0.3
CD48-203ENST00000613788 OR5J2Q8NH18 312 aa13.17□□□□□ -0.3
CD48-203ENST00000613788 GTPBP3Q969Y2 492 aaKnown RBP13.17□□□□□ -0.3
CD48-203ENST00000613788 ZNF845Q96IR2 970 aaPredicted RBP13.17□□□□□ -0.3
CD48-203ENST00000613788 SRXN1Q9BYN0 137 aa13.17□□□□□ -0.3
CD48-203ENST00000613788 GABARAPL1Q9H0R8 117 aa13.17□□□□□ -0.3
CD48-203ENST00000613788 ZNF175Q9Y473 711 aa13.17□□□□□ -0.3
CD48-203ENST00000613788 SPTA1P02549 2419 aa13.17□□□□□ -0.3
CD48-203ENST00000613788 UNC119BA6NIH7 251 aa13.16□□□□□ -0.3
CD48-203ENST00000613788 CLCA1A8K7I4 914 aa13.16□□□□□ -0.3
CD48-203ENST00000613788 M0R082 166 aa13.16□□□□□ -0.3
CD48-203ENST00000613788 PDLIM1O00151 329 aa13.16□□□□□ -0.3
CD48-203ENST00000613788 CDC42EP2O14613 210 aa13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms