RNA–Protein interactions for RNA: ENST00000613547.4

MDC1-209, Transcript of mediator of DNA damage checkpoint 1, humanhuman

TSL 5 BASIC

Gene MDC1, Length 830 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDC1-209ENST00000613547 THY1P04216 161 aa11.84□□□□□ -0.51
MDC1-209ENST00000613547 FABP3P05413 133 aa11.84□□□□□ -0.51
MDC1-209ENST00000613547 HOXB6P17509 224 aaKnown RBP11.84□□□□□ -0.51
MDC1-209ENST00000613547 RHCEP18577 417 aa11.84□□□□□ -0.51
MDC1-209ENST00000613547 SMIM11AP58511 58 aa11.84□□□□□ -0.51
MDC1-209ENST00000613547 FOXF2Q12947 444 aa11.84□□□□□ -0.51
MDC1-209ENST00000613547 TRAM2Q15035 370 aa11.84□□□□□ -0.51
MDC1-209ENST00000613547 PDK3Q15120 406 aa11.84□□□□□ -0.51
MDC1-209ENST00000613547 FAM98BQ52LJ0 330 aaKnown RBP11.84□□□□□ -0.51
MDC1-209ENST00000613547 OTUD3Q5T2D3 398 aaPredicted RBP11.84□□□□□ -0.51
MDC1-209ENST00000613547 TMEM225Q6GV28 225 aa11.84□□□□□ -0.51
MDC1-209ENST00000613547 ABLIM2Q6H8Q1 611 aa11.84□□□□□ -0.51
MDC1-209ENST00000613547 LINC00114Q6XXX2 140 aa11.84□□□□□ -0.51
MDC1-209ENST00000613547 TSPYL5Q86VY4 417 aaPredicted RBP11.84□□□□□ -0.51
MDC1-209ENST00000613547 P3H2Q8IVL5 708 aa11.84□□□□□ -0.51
MDC1-209ENST00000613547 OR6K3Q8NGY3 331 aa11.84□□□□□ -0.51
MDC1-209ENST00000613547 C7orf34Q96L11 122 aa11.84□□□□□ -0.51
MDC1-209ENST00000613547 ZNF300Q96RE9 604 aaPredicted RBP11.84□□□□□ -0.51
MDC1-209ENST00000613547 ZNF347Q96SE7 839 aa11.84□□□□□ -0.51
MDC1-209ENST00000613547 SEPHS2Q99611 448 aa11.84□□□□□ -0.51
MDC1-209ENST00000613547 ASPNQ9BXN1 380 aa11.84□□□□□ -0.51
MDC1-209ENST00000613547 ANKRD19PQ9H560 264 aa11.84□□□□□ -0.51
MDC1-209ENST00000613547 MAGIXQ9H6Y5 334 aa11.84□□□□□ -0.51
MDC1-209ENST00000613547 NDUFAF4Q9P032 175 aa11.84□□□□□ -0.51
MDC1-209ENST00000613547 ZKSCAN7Q9P0L1 754 aaPredicted RBP11.84□□□□□ -0.51
MDC1-209ENST00000613547 KLHL13Q9P2N7 655 aa11.84□□□□□ -0.51
MDC1-209ENST00000613547 CLEC4AQ9UMR7 237 aa11.84□□□□□ -0.51
MDC1-209ENST00000613547 A4GNTQ9UNA3 340 aa11.84□□□□□ -0.51
MDC1-209ENST00000613547 MED31Q9Y3C7 131 aa11.84□□□□□ -0.51
MDC1-209ENST00000613547 CORINQ9Y5Q5 1042 aa11.84□□□□□ -0.51
MDC1-209ENST00000613547 KLF2Q9Y5W3 355 aaPredicted RBP11.84□□□□□ -0.51
MDC1-209ENST00000613547 HEATR5AQ86XA9 2040 aa11.84□□□□□ -0.51
MDC1-209ENST00000613547 AQP7P3A6NL99 342 aa11.83□□□□□ -0.52
MDC1-209ENST00000613547 AQP12BA6NM10 295 aa11.83□□□□□ -0.52
MDC1-209ENST00000613547 FTCDNL1E5RQL4 147 aa11.83□□□□□ -0.52
MDC1-209ENST00000613547 J3KTA2 159 aa11.83□□□□□ -0.52
MDC1-209ENST00000613547 ACOT8O14734 319 aa11.83□□□□□ -0.52
MDC1-209ENST00000613547 SMNDC1O75940 238 aaKnown RBP eCLIP11.83□□□□□ -0.52
MDC1-209ENST00000613547 AKR7A3O95154 331 aa11.83□□□□□ -0.52
MDC1-209ENST00000613547 LYPD3O95274 346 aa11.83□□□□□ -0.52
MDC1-209ENST00000613547 H1F0P07305 194 aaKnown RBP11.83□□□□□ -0.52
MDC1-209ENST00000613547 YES1P07947 543 aa11.83□□□□□ -0.52
MDC1-209ENST00000613547 RNF224P0DH78 156 aa11.83□□□□□ -0.52
MDC1-209ENST00000613547 H3F3AP84243 136 aa11.83□□□□□ -0.52
MDC1-209ENST00000613547 VLDLRP98155 873 aa11.83□□□□□ -0.52
MDC1-209ENST00000613547 CHRNB3Q05901 458 aa11.83□□□□□ -0.52
MDC1-209ENST00000613547 RRM2BQ7LG56 351 aa11.83□□□□□ -0.52
MDC1-209ENST00000613547 MAMDC2Q7Z304 686 aaPredicted RBP11.83□□□□□ -0.52
MDC1-209ENST00000613547 STK32CQ86UX6 486 aa11.83□□□□□ -0.52
MDC1-209ENST00000613547 ZDHHC21Q8IVQ6 265 aa11.83□□□□□ -0.52
MDC1-209ENST00000613547 NKAIN4Q8IVV8 208 aa11.83□□□□□ -0.52
MDC1-209ENST00000613547 AQP12AQ8IXF9 295 aa11.83□□□□□ -0.52
MDC1-209ENST00000613547 TMEM255BQ8WV15 326 aa11.83□□□□□ -0.52
MDC1-209ENST00000613547 TMEM239Q8WW34 195 aa11.83□□□□□ -0.52
MDC1-209ENST00000613547 TAAR8Q969N4 342 aa11.83□□□□□ -0.52
MDC1-209ENST00000613547 PIP5K1AQ99755 562 aa11.83□□□□□ -0.52
MDC1-209ENST00000613547 PSD2Q9BQI7 771 aa11.83□□□□□ -0.52
MDC1-209ENST00000613547 PRSS27Q9BQR3 290 aa11.83□□□□□ -0.52
MDC1-209ENST00000613547 ZNF426Q9BUY5 554 aa11.83□□□□□ -0.52
MDC1-209ENST00000613547 PTDSS2Q9BVG9 487 aa11.83□□□□□ -0.52
MDC1-209ENST00000613547 SF3B5Q9BWJ5 86 aaKnown RBP11.83□□□□□ -0.52
MDC1-209ENST00000613547 BCO1Q9HAY6 547 aa11.83□□□□□ -0.52
MDC1-209ENST00000613547 IL1RAPQ9NPH3 570 aa11.83□□□□□ -0.52
MDC1-209ENST00000613547 FANCFQ9NPI8 374 aa11.83□□□□□ -0.52
MDC1-209ENST00000613547 RHCGQ9UBD6 479 aa11.83□□□□□ -0.52
MDC1-209ENST00000613547 PROCRQ9UNN8 238 aa11.83□□□□□ -0.52
MDC1-209ENST00000613547 POMPQ9Y244 141 aa11.83□□□□□ -0.52
MDC1-209ENST00000613547 RASD1Q9Y272 281 aa11.83□□□□□ -0.52
MDC1-209ENST00000613547 B3GALT5Q9Y2C3 310 aa11.83□□□□□ -0.52
MDC1-209ENST00000613547 PCNX3Q9H6A9 2034 aa11.82□□□□□ -0.52
MDC1-209ENST00000613547 RELNP78509 3460 aa11.82□□□□□ -0.52
MDC1-209ENST00000613547 TCRBV5S2A0A599 114 aa11.82□□□□□ -0.52
MDC1-209ENST00000613547 ZNF724A8MTY0 619 aa11.82□□□□□ -0.52
MDC1-209ENST00000613547 KPNA4O00629 521 aaPredicted RBP11.82□□□□□ -0.52
MDC1-209ENST00000613547 MSTNO14793 375 aa11.82□□□□□ -0.52
MDC1-209ENST00000613547 FFAR1O14842 300 aa11.82□□□□□ -0.52
MDC1-209ENST00000613547 CIB2O75838 187 aa11.82□□□□□ -0.52
MDC1-209ENST00000613547 TNFSF13O75888 250 aa11.82□□□□□ -0.52
MDC1-209ENST00000613547 IGF2P01344 180 aa11.82□□□□□ -0.52
MDC1-209ENST00000613547 MT-ND1P03886 318 aa11.82□□□□□ -0.52
MDC1-209ENST00000613547 SEMG1P04279 462 aa11.82□□□□□ -0.52
MDC1-209ENST00000613547 HIST1H2ABP04908 130 aa11.82□□□□□ -0.52
MDC1-209ENST00000613547 CD8BP10966 210 aa11.82□□□□□ -0.52
MDC1-209ENST00000613547 NQO1P15559 274 aaKnown RBP11.82□□□□□ -0.52
MDC1-209ENST00000613547 PTNP21246 168 aa11.82□□□□□ -0.52
MDC1-209ENST00000613547 GRPRP30550 384 aa11.82□□□□□ -0.52
MDC1-209ENST00000613547 AGTR1P30556 359 aa11.82□□□□□ -0.52
MDC1-209ENST00000613547 KIR2DL2P43627 348 aaPredicted RBP11.82□□□□□ -0.52
MDC1-209ENST00000613547 ASCL1P50553 236 aa11.82□□□□□ -0.52
MDC1-209ENST00000613547 SLC16A1P53985 500 aa11.82□□□□□ -0.52
MDC1-209ENST00000613547 FOXD4Q12950 439 aaPredicted RBP11.82□□□□□ -0.52
MDC1-209ENST00000613547 GUSBP1Q15486 140 aa11.82□□□□□ -0.52
MDC1-209ENST00000613547 FGD3Q5JSP0 725 aa11.82□□□□□ -0.52
MDC1-209ENST00000613547 WDR88Q6ZMY6 472 aa11.82□□□□□ -0.52
MDC1-209ENST00000613547 HIST3H2AQ7L7L0 130 aa11.82□□□□□ -0.52
MDC1-209ENST00000613547 GALNT5Q7Z7M9 940 aa11.82□□□□□ -0.52
MDC1-209ENST00000613547 LIX1LQ8IVB5 337 aa11.82□□□□□ -0.52
MDC1-209ENST00000613547 TUSC5Q8IXB3 177 aa11.82□□□□□ -0.52
MDC1-209ENST00000613547 TMEM99Q8N816 258 aa11.82□□□□□ -0.52
MDC1-209ENST00000613547 SCAIQ8N9R8 606 aa11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms