RNA–Protein interactions for RNA: ENST00000613099.4

VPS13D-213, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VPS13D, Length 16,245 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-213ENST00000613099 OR4M1Q8NGD0 313 aa4.63□□□□□ -1.67
VPS13D-213ENST00000613099 OR6K6Q8NGW6 343 aa4.63□□□□□ -1.67
VPS13D-213ENST00000613099 OR51Q1Q8NH59 317 aa4.63□□□□□ -1.67
VPS13D-213ENST00000613099 ABHD4Q8TB40 342 aa4.63□□□□□ -1.67
VPS13D-213ENST00000613099 SPATA33Q96N06 139 aa4.63□□□□□ -1.67
VPS13D-213ENST00000613099 GPR21Q99679 349 aa4.63□□□□□ -1.67
VPS13D-213ENST00000613099 MED17Q9NVC6 651 aa4.63□□□□□ -1.67
VPS13D-213ENST00000613099 CLDN16Q9Y5I7 305 aa4.63□□□□□ -1.67
VPS13D-213ENST00000613099 KIAA1671Q9BY89 1806 aa4.63□□□□□ -1.67
VPS13D-213ENST00000613099 HCKP08631 526 aa4.63□□□□□ -1.67
VPS13D-213ENST00000613099 OR13C7P0DN81 318 aa4.63□□□□□ -1.67
VPS13D-213ENST00000613099 RPL24P83731 157 aaKnown RBP4.63□□□□□ -1.67
VPS13D-213ENST00000613099 DGKZQ13574 1117 aa4.63□□□□□ -1.67
VPS13D-213ENST00000613099 EIF2B1Q14232 305 aaKnown RBP4.63□□□□□ -1.67
VPS13D-213ENST00000613099 TMEM173Q86WV6 379 aaPredicted RBP4.63□□□□□ -1.67
VPS13D-213ENST00000613099 NXPE1Q8N323 547 aa4.63□□□□□ -1.67
VPS13D-213ENST00000613099 KRTCAP2Q8N6L1 136 aa4.63□□□□□ -1.67
VPS13D-213ENST00000613099 ZNF417Q8TAU3 575 aa4.63□□□□□ -1.67
VPS13D-213ENST00000613099 TINAGQ9UJW2 476 aa4.63□□□□□ -1.67
VPS13D-213ENST00000613099 TMEM14AQ9Y6G1 99 aa4.63□□□□□ -1.67
VPS13D-213ENST00000613099 GABARAPH6UMI1 98 aa4.63□□□□□ -1.67
VPS13D-213ENST00000613099 CAV2P51636 162 aa4.63□□□□□ -1.67
VPS13D-213ENST00000613099 RASGEF1BQ0VAM2 473 aa4.63□□□□□ -1.67
VPS13D-213ENST00000613099 GSG1Q2KHT4 349 aa4.63□□□□□ -1.67
VPS13D-213ENST00000613099 ALG10Q5BKT4 473 aa4.63□□□□□ -1.67
VPS13D-213ENST00000613099 C7orf61Q8IZ16 206 aa4.63□□□□□ -1.67
VPS13D-213ENST00000613099 ZNF485Q8NCK3 441 aa4.63□□□□□ -1.67
VPS13D-213ENST00000613099 IMP4Q96G21 291 aaKnown RBP4.63□□□□□ -1.67
VPS13D-213ENST00000613099 ZDHHC6Q9H6R6 413 aa4.63□□□□□ -1.67
VPS13D-213ENST00000613099 EMCNQ9ULC0 261 aa4.63□□□□□ -1.67
VPS13D-213ENST00000613099 LY75O60449 1722 aa4.63□□□□□ -1.67
VPS13D-213ENST00000613099 SYT5O00445 386 aa4.63□□□□□ -1.67
VPS13D-213ENST00000613099 TOX3O15405 576 aaPredicted RBP4.63□□□□□ -1.67
VPS13D-213ENST00000613099 SOX14O95416 240 aa4.63□□□□□ -1.67
VPS13D-213ENST00000613099 ARFRP1Q13795 201 aa4.63□□□□□ -1.67
VPS13D-213ENST00000613099 DEFB106AQ8N104 65 aa4.63□□□□□ -1.67
VPS13D-213ENST00000613099 OR5B17Q8NGF7 314 aa4.63□□□□□ -1.67
VPS13D-213ENST00000613099 OR4A4PQ8NGN8 299 aa4.63□□□□□ -1.67
VPS13D-213ENST00000613099 SYNPRQ8TBG9 265 aa4.63□□□□□ -1.67
VPS13D-213ENST00000613099 GPR152Q8TDT2 470 aa4.63□□□□□ -1.67
VPS13D-213ENST00000613099 TRIB3Q96RU7 358 aa4.63□□□□□ -1.67
VPS13D-213ENST00000613099 DEFB129Q9H1M3 183 aa4.63□□□□□ -1.67
VPS13D-213ENST00000613099 SLC17A3O00476 420 aa4.63□□□□□ -1.67
VPS13D-213ENST00000613099 GABRPO00591 440 aa4.63□□□□□ -1.67
VPS13D-213ENST00000613099 USP17L7P0C7H9 530 aa4.63□□□□□ -1.67
VPS13D-213ENST00000613099 THBS4P35443 961 aa4.63□□□□□ -1.67
VPS13D-213ENST00000613099 TNFRSF9Q07011 255 aa4.63□□□□□ -1.67
VPS13D-213ENST00000613099 MPPE1Q53F39 396 aa4.63□□□□□ -1.67
VPS13D-213ENST00000613099 DND1Q8IYX4 353 aaKnown RBP4.63□□□□□ -1.67
VPS13D-213ENST00000613099 SFXN5Q8TD22 340 aa4.63□□□□□ -1.67
VPS13D-213ENST00000613099 KCNE4Q8WWG9 221 aa4.63□□□□□ -1.67
VPS13D-213ENST00000613099 OSMRQ99650 979 aa4.63□□□□□ -1.67
VPS13D-213ENST00000613099 GALPQ9UBC7 116 aa4.63□□□□□ -1.67
VPS13D-213ENST00000613099 DNAJC15Q9Y5T4 150 aa4.63□□□□□ -1.67
VPS13D-213ENST00000613099 A0A0B4J2A0 478 aa4.63□□□□□ -1.67
VPS13D-213ENST00000613099 KCNAB3O43448 404 aa4.63□□□□□ -1.67
VPS13D-213ENST00000613099 CPEP16870 476 aa4.63□□□□□ -1.67
VPS13D-213ENST00000613099 AHRP35869 848 aa4.63□□□□□ -1.67
VPS13D-213ENST00000613099 PBX3P40426 434 aa4.63□□□□□ -1.67
VPS13D-213ENST00000613099 CYB5R2Q6BCY4 276 aa4.63□□□□□ -1.67
VPS13D-213ENST00000613099 TBPL2Q6SJ96 375 aa4.63□□□□□ -1.67
VPS13D-213ENST00000613099 METTL21AQ8WXB1 218 aa4.63□□□□□ -1.67
VPS13D-213ENST00000613099 ASB11Q8WXH4 323 aa4.63□□□□□ -1.67
VPS13D-213ENST00000613099 DPH1Q9BZG8 443 aa4.63□□□□□ -1.67
VPS13D-213ENST00000613099 CAPN10Q9HC96 672 aa4.63□□□□□ -1.67
VPS13D-213ENST00000613099 SHPKQ9UHJ6 478 aa4.63□□□□□ -1.67
VPS13D-213ENST00000613099 SPATA31A5Q5VU36 1347 aa4.63□□□□□ -1.67
VPS13D-213ENST00000613099 SPATA31A7Q8IWB4 1347 aa4.63□□□□□ -1.67
VPS13D-213ENST00000613099 FAM74A7A6NL05 159 aa4.63□□□□□ -1.67
VPS13D-213ENST00000613099 SLC25A12O75746 678 aa4.63□□□□□ -1.67
VPS13D-213ENST00000613099 SERPINA4P29622 427 aa4.63□□□□□ -1.67
VPS13D-213ENST00000613099 IRS1P35568 1242 aa4.63□□□□□ -1.67
VPS13D-213ENST00000613099 HERV-K104P61576 105 aa4.63□□□□□ -1.67
VPS13D-213ENST00000613099 FAM74A3Q4VXF1 159 aa4.63□□□□□ -1.67
VPS13D-213ENST00000613099 ZBTB2Q8N680 514 aa4.63□□□□□ -1.67
VPS13D-213ENST00000613099 ZNF587Q96SQ5 575 aaPredicted RBP4.63□□□□□ -1.67
VPS13D-213ENST00000613099 SGPP1Q9BX95 441 aa4.63□□□□□ -1.67
VPS13D-213ENST00000613099 KATNBL1Q9H079 304 aa4.63□□□□□ -1.67
VPS13D-213ENST00000613099 SLC7A11Q9UPY5 501 aa4.63□□□□□ -1.67
VPS13D-213ENST00000613099 AHCTF1Q8WYP5 2266 aa4.63□□□□□ -1.67
VPS13D-213ENST00000613099 ZNF814B7Z6K7 855 aa4.63□□□□□ -1.67
VPS13D-213ENST00000613099 GPR39O43194 453 aa4.63□□□□□ -1.67
VPS13D-213ENST00000613099 MMP3P08254 477 aa4.63□□□□□ -1.67
VPS13D-213ENST00000613099 MMP10P09238 476 aa4.63□□□□□ -1.67
VPS13D-213ENST00000613099 ICAM2P13598 275 aa4.63□□□□□ -1.67
VPS13D-213ENST00000613099 CD96P40200 585 aa4.63□□□□□ -1.67
VPS13D-213ENST00000613099 C6orf132Q5T0Z8 1188 aa4.63□□□□□ -1.67
VPS13D-213ENST00000613099 MRPL52Q86TS9 123 aaKnown RBP4.63□□□□□ -1.67
VPS13D-213ENST00000613099 RIMKLAQ8IXN7 391 aa4.63□□□□□ -1.67
VPS13D-213ENST00000613099 CXorf40BQ96DE9 158 aa4.63□□□□□ -1.67
VPS13D-213ENST00000613099 EBPLQ9BY08 206 aa4.63□□□□□ -1.67
VPS13D-213ENST00000613099 MGAMO43451 1857 aa4.63□□□□□ -1.67
VPS13D-213ENST00000613099 DENND4AQ7Z401 1863 aa4.63□□□□□ -1.67
VPS13D-213ENST00000613099 NEMP2A6NFY4 417 aa4.63□□□□□ -1.67
VPS13D-213ENST00000613099 ADRB3P13945 408 aa4.63□□□□□ -1.67
VPS13D-213ENST00000613099 CD99P14209 185 aa4.63□□□□□ -1.67
VPS13D-213ENST00000613099 MYOGP15173 224 aa4.63□□□□□ -1.67
VPS13D-213ENST00000613099 PCBP4P57723 403 aaKnown RBP4.63□□□□□ -1.67
VPS13D-213ENST00000613099 GALNT2Q10471 571 aa4.63□□□□□ -1.67
VPS13D-213ENST00000613099 TUSC3Q13454 348 aa4.63□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms