RNA–Protein interactions for RNA: ENST00000612672.1

MMP28-203, Transcript of matrix metallopeptidase 28, humanhuman

TSL 1 (best) BASIC

Gene MMP28, Length 1,092 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MMP28-203ENST00000612672 POMGNT2Q8NAT1 580 aa20.3■□□□□ 0.84
MMP28-203ENST00000612672 BCL2L2Q92843 193 aaPredicted RBP20.3■□□□□ 0.84
MMP28-203ENST00000612672 DDIT4LQ96D03 193 aa20.3■□□□□ 0.84
MMP28-203ENST00000612672 MID2Q9UJV3 735 aa20.3■□□□□ 0.84
MMP28-203ENST00000612672 A0A096LPE4 126 aa20.29■□□□□ 0.84
MMP28-203ENST00000612672 A0A1W2PPZ6 126 aa20.29■□□□□ 0.84
MMP28-203ENST00000612672 ZNF503-AS2A6NEH8 195 aa20.29■□□□□ 0.84
MMP28-203ENST00000612672 LIPT2A6NK58 231 aa20.29■□□□□ 0.84
MMP28-203ENST00000612672 FKBP2P26885 142 aaKnown RBP20.29■□□□□ 0.84
MMP28-203ENST00000612672 THBS4P35443 961 aa20.29■□□□□ 0.84
MMP28-203ENST00000612672 RIN1Q13671 783 aa20.29■□□□□ 0.84
MMP28-203ENST00000612672 OR7A5Q15622 319 aa20.29■□□□□ 0.84
MMP28-203ENST00000612672 IFT20Q8IY31 132 aa20.29■□□□□ 0.84
MMP28-203ENST00000612672 SVOPLQ8N434 492 aa20.29■□□□□ 0.84
MMP28-203ENST00000612672 ANKFN1Q8N957 763 aa20.29■□□□□ 0.84
MMP28-203ENST00000612672 ZNF540Q8NDQ6 660 aa20.29■□□□□ 0.84
MMP28-203ENST00000612672 OIT3Q8WWZ8 545 aa20.29■□□□□ 0.84
MMP28-203ENST00000612672 DOK1Q99704 481 aa20.29■□□□□ 0.84
MMP28-203ENST00000612672 POLE3Q9NRF9 147 aa20.29■□□□□ 0.84
MMP28-203ENST00000612672 ST6GALNAC1Q9NSC7 600 aaPredicted RBP20.29■□□□□ 0.84
MMP28-203ENST00000612672 TGP01266 2768 aa20.29■□□□□ 0.84
MMP28-203ENST00000612672 AQP7P3A6NL99 342 aa20.28■□□□□ 0.84
MMP28-203ENST00000612672 hCG_2039718K7EN88 272 aa20.28■□□□□ 0.84
MMP28-203ENST00000612672 RNASET2O00584 256 aaKnown RBP20.28■□□□□ 0.84
MMP28-203ENST00000612672 UPK3AO75631 287 aa20.28■□□□□ 0.84
MMP28-203ENST00000612672 CRYAAP02489 173 aa20.28■□□□□ 0.84
MMP28-203ENST00000612672 CHRM4P08173 479 aa20.28■□□□□ 0.84
MMP28-203ENST00000612672 SYPL1Q16563 259 aa20.28■□□□□ 0.84
MMP28-203ENST00000612672 C1QTNF12Q5T7M4 302 aa20.28■□□□□ 0.84
MMP28-203ENST00000612672 GPAT4Q86UL3 456 aa20.28■□□□□ 0.84
MMP28-203ENST00000612672 CDK20Q8IZL9 346 aa20.28■□□□□ 0.84
MMP28-203ENST00000612672 TUBGCP3Q96CW5 907 aa20.28■□□□□ 0.84
MMP28-203ENST00000612672 APOPT1Q96IL0 206 aa20.28■□□□□ 0.84
MMP28-203ENST00000612672 RHOXF2Q9BQY4 288 aa20.28■□□□□ 0.84
MMP28-203ENST00000612672 RAB1BQ9H0U4 201 aa20.28■□□□□ 0.84
MMP28-203ENST00000612672 SLC38A1Q9H2H9 487 aa20.28■□□□□ 0.84
MMP28-203ENST00000612672 OBP2BQ9NPH6 170 aa20.28■□□□□ 0.84
MMP28-203ENST00000612672 TMEM45AQ9NWC5 275 aa20.28■□□□□ 0.84
MMP28-203ENST00000612672 ARPC4-TTLL3A0A0A6YYG9 625 aa20.27■□□□□ 0.84
MMP28-203ENST00000612672 HMGN4O00479 90 aa20.27■□□□□ 0.84
MMP28-203ENST00000612672 CPSF4O95639 269 aaKnown RBP20.27■□□□□ 0.84
MMP28-203ENST00000612672 EGR1P18146 543 aa20.27■□□□□ 0.84
MMP28-203ENST00000612672 SLC1A3P43003 542 aa20.27■□□□□ 0.84
MMP28-203ENST00000612672 HTR3AP46098 478 aa20.27■□□□□ 0.84
MMP28-203ENST00000612672 BNIP2Q12982 314 aa20.27■□□□□ 0.84
MMP28-203ENST00000612672 MSMPQ1L6U9 139 aa20.27■□□□□ 0.84
MMP28-203ENST00000612672 GPAT3Q53EU6 434 aa20.27■□□□□ 0.84
MMP28-203ENST00000612672 ATAD3BQ5T9A4 648 aa20.27■□□□□ 0.84
MMP28-203ENST00000612672 CARM1Q86X55 608 aa20.27■□□□□ 0.84
MMP28-203ENST00000612672 CNPY4Q8N129 248 aa20.27■□□□□ 0.84
MMP28-203ENST00000612672 ANP32BQ92688 251 aaKnown RBP20.27■□□□□ 0.84
MMP28-203ENST00000612672 HPS1Q92902 700 aa20.27■□□□□ 0.84
MMP28-203ENST00000612672 NEURL3Q96EH8 262 aa20.27■□□□□ 0.84
MMP28-203ENST00000612672 KCNS3Q9BQ31 491 aa20.27■□□□□ 0.84
MMP28-203ENST00000612672 MKS1Q9NXB0 559 aa20.27■□□□□ 0.84
MMP28-203ENST00000612672 ASIC5Q9NY37 505 aa20.27■□□□□ 0.84
MMP28-203ENST00000612672 RPS4Y1P22090 263 aaKnown RBP20.26■□□□□ 0.83
MMP28-203ENST00000612672 UQCRC2P22695 453 aa20.26■□□□□ 0.83
MMP28-203ENST00000612672 KHKP50053 298 aa20.26■□□□□ 0.83
MMP28-203ENST00000612672 EPS8Q12929 822 aa20.26■□□□□ 0.83
MMP28-203ENST00000612672 EPHX4Q8IUS5 362 aa20.26■□□□□ 0.83
MMP28-203ENST00000612672 ZNF786Q8N393 782 aa20.26■□□□□ 0.83
MMP28-203ENST00000612672 NUP37Q8NFH4 326 aa20.26■□□□□ 0.83
MMP28-203ENST00000612672 OR8J2Q8NGG1 315 aa20.26■□□□□ 0.83
MMP28-203ENST00000612672 PMM1Q92871 262 aa20.26■□□□□ 0.83
MMP28-203ENST00000612672 SF3B5Q9BWJ5 86 aaKnown RBP20.26■□□□□ 0.83
MMP28-203ENST00000612672 SH3PXD2BA1X283 911 aa20.25■□□□□ 0.83
MMP28-203ENST00000612672 AGAP5A6NIR3 686 aa20.25■□□□□ 0.83
MMP28-203ENST00000612672 ZNF587BE7ETH6 402 aa20.25■□□□□ 0.83
MMP28-203ENST00000612672 RGS9O75916 674 aaPredicted RBP20.25■□□□□ 0.83
MMP28-203ENST00000612672 IGKV3-15P01624 115 aa20.25■□□□□ 0.83
MMP28-203ENST00000612672 DVL1P1P54792 670 aaPredicted RBP20.25■□□□□ 0.83
MMP28-203ENST00000612672 EMX2Q04743 252 aa20.25■□□□□ 0.83
MMP28-203ENST00000612672 MRPL2Q5T653 305 aaKnown RBP20.25■□□□□ 0.83
MMP28-203ENST00000612672 CREB3L2Q70SY1 520 aa20.25■□□□□ 0.83
MMP28-203ENST00000612672 SPATA21Q7Z572 469 aa20.25■□□□□ 0.83
MMP28-203ENST00000612672 UBLCP1Q8WVY7 318 aaPredicted RBP20.25■□□□□ 0.83
MMP28-203ENST00000612672 PPP1R36Q96LQ0 422 aa20.25■□□□□ 0.83
MMP28-203ENST00000612672 TPK1Q9H3S4 243 aa20.25■□□□□ 0.83
MMP28-203ENST00000612672 OCEL1Q9H607 264 aa20.25■□□□□ 0.83
MMP28-203ENST00000612672 METTL17Q9H7H0 456 aaPredicted RBP20.25■□□□□ 0.83
MMP28-203ENST00000612672 ZNF442Q9H7R0 627 aa20.25■□□□□ 0.83
MMP28-203ENST00000612672 IGHV2OR16-5A0A0B4J2B6 119 aa20.24■□□□□ 0.83
MMP28-203ENST00000612672 FAAHO00519 579 aa20.24■□□□□ 0.83
MMP28-203ENST00000612672 SPAG7O75391 227 aa20.24■□□□□ 0.83
MMP28-203ENST00000612672 AGR2O95994 175 aa20.24■□□□□ 0.83
MMP28-203ENST00000612672 GPIP06744 558 aa20.24■□□□□ 0.83
MMP28-203ENST00000612672 UBE2NP61088 152 aaKnown RBP20.24■□□□□ 0.83
MMP28-203ENST00000612672 MAPK11Q15759 364 aa20.24■□□□□ 0.83
MMP28-203ENST00000612672 ADRM1Q16186 407 aa20.24■□□□□ 0.83
MMP28-203ENST00000612672 C3orf36Q3SXR2 165 aa20.24■□□□□ 0.83
MMP28-203ENST00000612672 NIPAL3Q6P499 406 aa20.24■□□□□ 0.83
MMP28-203ENST00000612672 MAGEE2Q8TD90 523 aaPredicted RBP20.24■□□□□ 0.83
MMP28-203ENST00000612672 NEU4Q8WWR8 484 aaPredicted RBP20.24■□□□□ 0.83
MMP28-203ENST00000612672 RLIMQ9NVW2 624 aa20.24■□□□□ 0.83
MMP28-203ENST00000612672 ADPRHL2Q9NX46 363 aa20.24■□□□□ 0.83
MMP28-203ENST00000612672 NOP53Q9NZM5 478 aaKnown RBP20.24■□□□□ 0.83
MMP28-203ENST00000612672 MARCOQ9UEW3 520 aaPredicted RBP20.24■□□□□ 0.83
MMP28-203ENST00000612672 FRS3O43559 492 aa20.23■□□□□ 0.83
MMP28-203ENST00000612672 KRT33AO76009 404 aa20.23■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms