RNA–Protein interactions for RNA: ENST00000611833.4

NEK3-206, Transcript of NIMA related kinase 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene NEK3, Length 2,345 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-206ENST00000611833 GPR3P46089 330 aa15.78■□□□□ 0.12
NEK3-206ENST00000611833 PPM1FP49593 454 aaPredicted RBP15.78■□□□□ 0.12
NEK3-206ENST00000611833 ERVK-25P63136 954 aa15.78■□□□□ 0.12
NEK3-206ENST00000611833 LYPD4Q6UWN0 246 aa15.78■□□□□ 0.12
NEK3-206ENST00000611833 PARGQ86W56 976 aa15.78■□□□□ 0.12
NEK3-206ENST00000611833 NPEPL1Q8NDH3 523 aa15.78■□□□□ 0.12
NEK3-206ENST00000611833 OR4D9Q8NGE8 314 aa15.78■□□□□ 0.12
NEK3-206ENST00000611833 ZNF671Q8TAW3 534 aa15.78■□□□□ 0.12
NEK3-206ENST00000611833 NECTIN4Q96NY8 510 aa15.78■□□□□ 0.12
NEK3-206ENST00000611833 MED28Q9H204 178 aa15.78■□□□□ 0.12
NEK3-206ENST00000611833 NUDT15Q9NV35 164 aa15.78■□□□□ 0.12
NEK3-206ENST00000611833 NCDNQ9UBB6 729 aa15.78■□□□□ 0.12
NEK3-206ENST00000611833 C2CD4DB7Z1M9 353 aa15.77■□□□□ 0.12
NEK3-206ENST00000611833 IMPA2O14732 288 aa15.77■□□□□ 0.12
NEK3-206ENST00000611833 OR7A10O76100 309 aa15.77■□□□□ 0.12
NEK3-206ENST00000611833 UCHL1P09936 223 aa15.77■□□□□ 0.12
NEK3-206ENST00000611833 SPI1P17947 270 aa15.77■□□□□ 0.12
NEK3-206ENST00000611833 BTCP35070 178 aa15.77■□□□□ 0.12
NEK3-206ENST00000611833 IGLV3-21P80748 117 aaPredicted RBP15.77■□□□□ 0.12
NEK3-206ENST00000611833 BTBD16Q32M84 506 aa15.77■□□□□ 0.12
NEK3-206ENST00000611833 SLC36A2Q495M3 483 aa15.77■□□□□ 0.12
NEK3-206ENST00000611833 HSD17B12Q53GQ0 312 aa15.77■□□□□ 0.12
NEK3-206ENST00000611833 PHF21AQ96BD5 680 aa15.77■□□□□ 0.12
NEK3-206ENST00000611833 RASD2Q96D21 266 aa15.77■□□□□ 0.12
NEK3-206ENST00000611833 MAP3K3Q99759 626 aa15.77■□□□□ 0.12
NEK3-206ENST00000611833 GTPBP2Q9BX10 602 aaKnown RBP15.77■□□□□ 0.12
NEK3-206ENST00000611833 COPS3Q9UNS2 423 aa15.77■□□□□ 0.12
NEK3-206ENST00000611833 TMEM131Q92545 1883 aa15.77■□□□□ 0.12
NEK3-206ENST00000611833 OR6C68A6NDL8 312 aa15.77■□□□□ 0.11
NEK3-206ENST00000611833 CEP78Q5JTW2 689 aa15.77■□□□□ 0.11
NEK3-206ENST00000611833 SLC35D3Q5M8T2 416 aa15.77■□□□□ 0.11
NEK3-206ENST00000611833 OVCH1Q7RTY7 1134 aa15.77■□□□□ 0.11
NEK3-206ENST00000611833 SLITRK4Q8IW52 837 aa15.77■□□□□ 0.11
NEK3-206ENST00000611833 METTL27Q8N6F8 245 aaPredicted RBP15.77■□□□□ 0.11
NEK3-206ENST00000611833 C10orf53Q8N6V4 93 aa15.77■□□□□ 0.11
NEK3-206ENST00000611833 GATSQ8NAP1 163 aa15.77■□□□□ 0.11
NEK3-206ENST00000611833 ZPLD1Q8TCW7 415 aa15.77■□□□□ 0.11
NEK3-206ENST00000611833 DEDD2Q8WXF8 326 aa15.77■□□□□ 0.11
NEK3-206ENST00000611833 YIPF5Q969M3 257 aa15.77■□□□□ 0.11
NEK3-206ENST00000611833 MMABQ96EY8 250 aaPredicted RBP15.77■□□□□ 0.11
NEK3-206ENST00000611833 NRIP3Q9NQ35 241 aa15.77■□□□□ 0.11
NEK3-206ENST00000611833 PRUNE2Q8WUY3 3088 aa15.76■□□□□ 0.11
NEK3-206ENST00000611833 BLACEA4D250 179 aa15.76■□□□□ 0.11
NEK3-206ENST00000611833 ZNF879B4DU55 563 aa15.76■□□□□ 0.11
NEK3-206ENST00000611833 ARPC3O15145 178 aa15.76■□□□□ 0.11
NEK3-206ENST00000611833 OR2B3O76000 313 aa15.76■□□□□ 0.11
NEK3-206ENST00000611833 BLKP51451 505 aa15.76■□□□□ 0.11
NEK3-206ENST00000611833 MMP15P51511 669 aa15.76■□□□□ 0.11
NEK3-206ENST00000611833 RPS11P62280 158 aaKnown RBP eCLIP15.76■□□□□ 0.11
NEK3-206ENST00000611833 DGCR2P98153 550 aa15.76■□□□□ 0.11
NEK3-206ENST00000611833 CCDC58Q4VC31 144 aa15.76■□□□□ 0.11
NEK3-206ENST00000611833 ESPNLQ6ZVH7 1005 aa15.76■□□□□ 0.11
NEK3-206ENST00000611833 SIAH3Q8IW03 269 aa15.76■□□□□ 0.11
NEK3-206ENST00000611833 C3orf49Q96BT1 292 aa15.76■□□□□ 0.11
NEK3-206ENST00000611833 KLHDC7BQ96G42 594 aa15.76■□□□□ 0.11
NEK3-206ENST00000611833 ORAI3Q9BRQ5 295 aa15.76■□□□□ 0.11
NEK3-206ENST00000611833 WSB2Q9NYS7 404 aaPredicted RBP15.76■□□□□ 0.11
NEK3-206ENST00000611833 A0A1W2PPC4 97 aa15.76■□□□□ 0.11
NEK3-206ENST00000611833 ELOA3DA6NLF2 546 aaPredicted RBP15.76■□□□□ 0.11
NEK3-206ENST00000611833 BLOC1S5-TXNDC5H3BN57 136 aa15.76■□□□□ 0.11
NEK3-206ENST00000611833 ZNF780AO75290 641 aaPredicted RBP15.76■□□□□ 0.11
NEK3-206ENST00000611833 GRK6P43250 576 aa15.76■□□□□ 0.11
NEK3-206ENST00000611833 PRPS1P60891 318 aa15.76■□□□□ 0.11
NEK3-206ENST00000611833 SNRPD2P62316 118 aaKnown RBP15.76■□□□□ 0.11
NEK3-206ENST00000611833 ELOA3BQ3SY89 546 aa15.76■□□□□ 0.11
NEK3-206ENST00000611833 ELOA3Q8NG57 546 aa15.76■□□□□ 0.11
NEK3-206ENST00000611833 OR6C4Q8NGE1 309 aa15.76■□□□□ 0.11
NEK3-206ENST00000611833 ADAMTS18Q8TE60 1221 aa15.76■□□□□ 0.11
NEK3-206ENST00000611833 TRAF4Q9BUZ4 470 aaPredicted RBP15.76■□□□□ 0.11
NEK3-206ENST00000611833 YIPF2Q9BWQ6 316 aa15.76■□□□□ 0.11
NEK3-206ENST00000611833 ZCCHC4Q9H5U6 513 aa15.76■□□□□ 0.11
NEK3-206ENST00000611833 C2orf42Q9NWW7 574 aa15.76■□□□□ 0.11
NEK3-206ENST00000611833 SPATA2Q9UM82 520 aa15.76■□□□□ 0.11
NEK3-206ENST00000611833 NUBP2Q9Y5Y2 271 aa15.76■□□□□ 0.11
NEK3-206ENST00000611833 HEATR5AQ86XA9 2040 aa15.75■□□□□ 0.11
NEK3-206ENST00000611833 A0A1B0GVT2 93 aa15.75■□□□□ 0.11
NEK3-206ENST00000611833 FAM171A2A8MVW0 826 aa15.75■□□□□ 0.11
NEK3-206ENST00000611833 PSMD9O00233 223 aa15.75■□□□□ 0.11
NEK3-206ENST00000611833 AKR7A2O43488 359 aa15.75■□□□□ 0.11
NEK3-206ENST00000611833 PRKNO60260 465 aaPredicted RBP15.75■□□□□ 0.11
NEK3-206ENST00000611833 NSA2O95478 260 aaKnown RBP15.75■□□□□ 0.11
NEK3-206ENST00000611833 TCRBP04435 133 aa15.75■□□□□ 0.11
NEK3-206ENST00000611833 HPGDP15428 266 aa15.75■□□□□ 0.11
NEK3-206ENST00000611833 GRPRP30550 384 aa15.75■□□□□ 0.11
NEK3-206ENST00000611833 CCR4P51679 360 aa15.75■□□□□ 0.11
NEK3-206ENST00000611833 FUT7Q11130 342 aa15.75■□□□□ 0.11
NEK3-206ENST00000611833 FCN2Q15485 313 aa15.75■□□□□ 0.11
NEK3-206ENST00000611833 FAM205BPQ63HN1 556 aa15.75■□□□□ 0.11
NEK3-206ENST00000611833 LEG1Q6P5S2 330 aa15.75■□□□□ 0.11
NEK3-206ENST00000611833 ZNF440Q8IYI8 595 aa15.75■□□□□ 0.11
NEK3-206ENST00000611833 FAM160A2Q8N612 972 aaPredicted RBP15.75■□□□□ 0.11
NEK3-206ENST00000611833 MOSPD2Q8NHP6 518 aa15.75■□□□□ 0.11
NEK3-206ENST00000611833 RLN3Q8WXF3 142 aa15.75■□□□□ 0.11
NEK3-206ENST00000611833 HSD17B8Q92506 261 aa15.75■□□□□ 0.11
NEK3-206ENST00000611833 TCTN2Q96GX1 697 aa15.75■□□□□ 0.11
NEK3-206ENST00000611833 ZNF578Q96N58 590 aaPredicted RBP15.75■□□□□ 0.11
NEK3-206ENST00000611833 NOX4Q9NPH5 578 aa15.75■□□□□ 0.11
NEK3-206ENST00000611833 STMN3Q9NZ72 180 aa15.75■□□□□ 0.11
NEK3-206ENST00000611833 CAMK2AQ9UQM7 478 aa15.75■□□□□ 0.11
NEK3-206ENST00000611833 HSPB11Q9Y547 144 aa15.75■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms