RNA–Protein interactions for RNA: ENST00000610354.4

CD9-212, Transcript of CD9 molecule, humanhuman

TSL 5 BASIC

Gene CD9, Length 1,315 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD9-212ENST00000610354 FAM220BPB1ANY3 271 aa11.29□□□□□ -0.6
CD9-212ENST00000610354 NME4O00746 187 aa11.29□□□□□ -0.6
CD9-212ENST00000610354 HRGP04196 525 aa11.29□□□□□ -0.6
CD9-212ENST00000610354 C8BP07358 591 aa11.29□□□□□ -0.6
CD9-212ENST00000610354 ROS1P08922 2347 aa11.29□□□□□ -0.6
CD9-212ENST00000610354 PSMB1P20618 241 aaKnown RBP11.29□□□□□ -0.6
CD9-212ENST00000610354 LTBQ06643 244 aa11.29□□□□□ -0.6
CD9-212ENST00000610354 VEZF1Q14119 521 aa11.29□□□□□ -0.6
CD9-212ENST00000610354 SLC17A1Q14916 467 aa11.29□□□□□ -0.6
CD9-212ENST00000610354 OTUD3Q5T2D3 398 aaPredicted RBP11.29□□□□□ -0.6
CD9-212ENST00000610354 PAQR6Q6TCH4 344 aa11.29□□□□□ -0.6
CD9-212ENST00000610354 GALNT5Q7Z7M9 940 aa11.29□□□□□ -0.6
CD9-212ENST00000610354 CDC20BQ86Y33 519 aa11.29□□□□□ -0.6
CD9-212ENST00000610354 ZIC4Q8N9L1 334 aa11.29□□□□□ -0.6
CD9-212ENST00000610354 PIGXQ8TBF5 258 aa11.29□□□□□ -0.6
CD9-212ENST00000610354 SLC38A4Q969I6 547 aa11.29□□□□□ -0.6
CD9-212ENST00000610354 TAAR8Q969N4 342 aa11.29□□□□□ -0.6
CD9-212ENST00000610354 ZHX1-C8orf76Q96EF9 292 aa11.29□□□□□ -0.6
CD9-212ENST00000610354 MCHR1Q99705 422 aa11.29□□□□□ -0.6
CD9-212ENST00000610354 POLDIP3Q9BY77 421 aaKnown RBP11.29□□□□□ -0.6
CD9-212ENST00000610354 RPS6KB2Q9UBS0 482 aa11.29□□□□□ -0.6
CD9-212ENST00000610354 SEC14L4Q9UDX3 406 aa11.29□□□□□ -0.6
CD9-212ENST00000610354 FLVCR1Q9Y5Y0 555 aa11.29□□□□□ -0.6
CD9-212ENST00000610354 OTOGQ6ZRI0 2925 aa11.28□□□□□ -0.6
CD9-212ENST00000610354 A0A087WUJ7 227 aa11.28□□□□□ -0.6
CD9-212ENST00000610354 AQP7P3A6NL99 342 aa11.28□□□□□ -0.6
CD9-212ENST00000610354 ELOA3DA6NLF2 546 aaPredicted RBP11.28□□□□□ -0.6
CD9-212ENST00000610354 EIF1BO60739 113 aaKnown RBP11.28□□□□□ -0.6
CD9-212ENST00000610354 ADAP00813 363 aa11.28□□□□□ -0.6
CD9-212ENST00000610354 GPIP06744 558 aa11.28□□□□□ -0.6
CD9-212ENST00000610354 TNFRSF1BP20333 461 aa11.28□□□□□ -0.6
CD9-212ENST00000610354 PTNP21246 168 aa11.28□□□□□ -0.6
CD9-212ENST00000610354 CRYGSP22914 178 aa11.28□□□□□ -0.6
CD9-212ENST00000610354 RPS5P46782 204 aaKnown RBP11.28□□□□□ -0.6
CD9-212ENST00000610354 CDH12P55289 794 aa11.28□□□□□ -0.6
CD9-212ENST00000610354 FOXG1P55316 489 aaPredicted RBP11.28□□□□□ -0.6
CD9-212ENST00000610354 POU4F3Q15319 338 aa11.28□□□□□ -0.6
CD9-212ENST00000610354 ELOA3BQ3SY89 546 aa11.28□□□□□ -0.6
CD9-212ENST00000610354 ALG10BQ5I7T1 473 aa11.28□□□□□ -0.6
CD9-212ENST00000610354 SFRP5Q5T4F7 317 aa11.28□□□□□ -0.6
CD9-212ENST00000610354 INTS11Q5TA45 600 aaKnown RBP11.28□□□□□ -0.6
CD9-212ENST00000610354 ULK3Q6PHR2 472 aa11.28□□□□□ -0.6
CD9-212ENST00000610354 LINC00114Q6XXX2 140 aa11.28□□□□□ -0.6
CD9-212ENST00000610354 HACD2Q6Y1H2 254 aa11.28□□□□□ -0.6
CD9-212ENST00000610354 WDR88Q6ZMY6 472 aa11.28□□□□□ -0.6
CD9-212ENST00000610354 MICU2Q8IYU8 434 aa11.28□□□□□ -0.6
CD9-212ENST00000610354 ELOA3Q8NG57 546 aa11.28□□□□□ -0.6
CD9-212ENST00000610354 MFSD8Q8NHS3 518 aa11.28□□□□□ -0.6
CD9-212ENST00000610354 VANGL1Q8TAA9 524 aaPredicted RBP11.28□□□□□ -0.6
CD9-212ENST00000610354 DNAJA4Q8WW22 397 aaPredicted RBP11.28□□□□□ -0.6
CD9-212ENST00000610354 ZC3HAV1LQ96H79 300 aaKnown RBP11.28□□□□□ -0.6
CD9-212ENST00000610354 NAA11Q9BSU3 229 aaPredicted RBP11.28□□□□□ -0.6
CD9-212ENST00000610354 NSRP1Q9H0G5 558 aaKnown RBP11.28□□□□□ -0.6
CD9-212ENST00000610354 EVA1AQ9H8M9 152 aa11.28□□□□□ -0.6
CD9-212ENST00000610354 TMEM27Q9HBJ8 222 aa11.28□□□□□ -0.6
CD9-212ENST00000610354 C6orf203Q9P0P8 240 aaPredicted RBP11.28□□□□□ -0.6
CD9-212ENST00000610354 NDRG3Q9UGV2 375 aa11.28□□□□□ -0.6
CD9-212ENST00000610354 CPSF4LA6NMK7 179 aaKnown RBP11.27□□□□□ -0.61
CD9-212ENST00000610354 KLF4O43474 513 aa11.27□□□□□ -0.61
CD9-212ENST00000610354 FMO6PO60774 539 aa11.27□□□□□ -0.61
CD9-212ENST00000610354 IGHV3-9P01782 118 aa11.27□□□□□ -0.61
CD9-212ENST00000610354 PNMTP11086 282 aa11.27□□□□□ -0.61
CD9-212ENST00000610354 IGHV1-2P23083 117 aa11.27□□□□□ -0.61
CD9-212ENST00000610354 PRDX6P30041 224 aa11.27□□□□□ -0.61
CD9-212ENST00000610354 KDELR2P33947 212 aa11.27□□□□□ -0.61
CD9-212ENST00000610354 SLC7A2P52569 658 aa11.27□□□□□ -0.61
CD9-212ENST00000610354 LIPEQ05469 1076 aa11.27□□□□□ -0.61
CD9-212ENST00000610354 ENTPD8Q5MY95 495 aa11.27□□□□□ -0.61
CD9-212ENST00000610354 FAM91A1Q658Y4 838 aa11.27□□□□□ -0.61
CD9-212ENST00000610354 ERICH5Q6P6B1 374 aa11.27□□□□□ -0.61
CD9-212ENST00000610354 Q6ZT83 130 aa11.27□□□□□ -0.61
CD9-212ENST00000610354 STK32CQ86UX6 486 aa11.27□□□□□ -0.61
CD9-212ENST00000610354 OR2T12Q8NG77 320 aa11.27□□□□□ -0.61
CD9-212ENST00000610354 SLC25A36Q96CQ1 311 aa11.27□□□□□ -0.61
CD9-212ENST00000610354 SLC47A1Q96FL8 570 aa11.27□□□□□ -0.61
CD9-212ENST00000610354 ZNF385AQ96PM9 386 aaKnown RBP11.27□□□□□ -0.61
CD9-212ENST00000610354 MED18Q9BUE0 208 aa11.27□□□□□ -0.61
CD9-212ENST00000610354 TAPBPLQ9BX59 468 aa11.27□□□□□ -0.61
CD9-212ENST00000610354 ACTR6Q9GZN1 396 aa11.27□□□□□ -0.61
CD9-212ENST00000610354 CLEC4MQ9H2X3 399 aaPredicted RBP11.27□□□□□ -0.61
CD9-212ENST00000610354 PLEKHF2Q9H8W4 249 aa11.27□□□□□ -0.61
CD9-212ENST00000610354 EFCAB1Q9HAE3 211 aa11.27□□□□□ -0.61
CD9-212ENST00000610354 ARL8BQ9NVJ2 186 aa11.27□□□□□ -0.61
CD9-212ENST00000610354 ADPRHL2Q9NX46 363 aa11.27□□□□□ -0.61
CD9-212ENST00000610354 ADAM21Q9UKJ8 722 aa11.27□□□□□ -0.61
CD9-212ENST00000610354 GPR52Q9Y2T5 361 aa11.27□□□□□ -0.61
CD9-212ENST00000610354 NOSIPQ9Y314 301 aaKnown RBP11.27□□□□□ -0.61
CD9-212ENST00000610354 CADP27708 2225 aa11.27□□□□□ -0.61
CD9-212ENST00000610354 RAI1Q7Z5J4 1906 aaPredicted RBP11.26□□□□□ -0.61
CD9-212ENST00000610354 ELOVL7A1L3X0 281 aa11.26□□□□□ -0.61
CD9-212ENST00000610354 LRRN3E7EW58 273 aa11.26□□□□□ -0.61
CD9-212ENST00000610354 GPR171O14626 319 aa11.26□□□□□ -0.61
CD9-212ENST00000610354 CASKO14936 926 aa11.26□□□□□ -0.61
CD9-212ENST00000610354 AHSA1O95433 338 aa11.26□□□□□ -0.61
CD9-212ENST00000610354 BGLAPP02818 100 aa11.26□□□□□ -0.61
CD9-212ENST00000610354 COX5AP20674 150 aa11.26□□□□□ -0.61
CD9-212ENST00000610354 CBLP22681 906 aa11.26□□□□□ -0.61
CD9-212ENST00000610354 GSK3BP49841 420 aa11.26□□□□□ -0.61
CD9-212ENST00000610354 NUDT2P50583 147 aa11.26□□□□□ -0.61
CD9-212ENST00000610354 PSME3P61289 254 aa11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms