RNA–Protein interactions for RNA: ENST00000604967.1

TUBE1-210, Transcript of tubulin epsilon 1, humanhuman

TSL 5

Gene TUBE1, Length 582 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBE1-210ENST00000604967 PIGXQ8TBF5 258 aa9.39□□□□□ -0.91
TUBE1-210ENST00000604967 KISS1RQ969F8 398 aaPredicted RBP9.39□□□□□ -0.91
TUBE1-210ENST00000604967 DDIT4LQ96D03 193 aa9.39□□□□□ -0.91
TUBE1-210ENST00000604967 SMR3AQ99954 134 aa9.39□□□□□ -0.91
TUBE1-210ENST00000604967 AMBRA1Q9C0C7 1298 aa9.39□□□□□ -0.91
TUBE1-210ENST00000604967 OR10A4Q9H209 315 aa9.39□□□□□ -0.91
TUBE1-210ENST00000604967 RAD21L1Q9H4I0 556 aa9.39□□□□□ -0.91
TUBE1-210ENST00000604967 GSX1Q9H4S2 264 aaPredicted RBP9.39□□□□□ -0.91
TUBE1-210ENST00000604967 NANOGQ9H9S0 305 aa9.39□□□□□ -0.91
TUBE1-210ENST00000604967 THUMPD1Q9NXG2 353 aaKnown RBP9.39□□□□□ -0.91
TUBE1-210ENST00000604967 MALT1Q9UDY8 824 aa9.39□□□□□ -0.91
TUBE1-210ENST00000604967 NOSIPQ9Y314 301 aaKnown RBP9.39□□□□□ -0.91
TUBE1-210ENST00000604967 SPIN1Q9Y657 262 aaPredicted RBP9.39□□□□□ -0.91
TUBE1-210ENST00000604967 NIPBLQ6KC79 2804 aaeCLIP9.38□□□□□ -0.91
TUBE1-210ENST00000604967 USF3Q68DE3 2245 aa9.38□□□□□ -0.91
TUBE1-210ENST00000604967 A0A0B4J2E0 115 aa9.38□□□□□ -0.91
TUBE1-210ENST00000604967 A0A1B0GX12 115 aa9.38□□□□□ -0.91
TUBE1-210ENST00000604967 SHISA9B4DS77 424 aa9.38□□□□□ -0.91
TUBE1-210ENST00000604967 C5orf58C9J3I9 102 aa9.38□□□□□ -0.91
TUBE1-210ENST00000604967 M0QX08 132 aa9.38□□□□□ -0.91
TUBE1-210ENST00000604967 RAD51DO75771 328 aa9.38□□□□□ -0.91
TUBE1-210ENST00000604967 SOD3P08294 240 aa9.38□□□□□ -0.91
TUBE1-210ENST00000604967 PNMTP11086 282 aa9.38□□□□□ -0.91
TUBE1-210ENST00000604967 IL32P24001 234 aa9.38□□□□□ -0.91
TUBE1-210ENST00000604967 CXCR1P25024 350 aa9.38□□□□□ -0.91
TUBE1-210ENST00000604967 IDUAP35475 653 aa9.38□□□□□ -0.91
TUBE1-210ENST00000604967 RPS5P46782 204 aaKnown RBP9.38□□□□□ -0.91
TUBE1-210ENST00000604967 SELENOPP49908 381 aa9.38□□□□□ -0.91
TUBE1-210ENST00000604967 IRX1P78414 480 aaPredicted RBP9.38□□□□□ -0.91
TUBE1-210ENST00000604967 FAPQ12884 760 aa9.38□□□□□ -0.91
TUBE1-210ENST00000604967 NFYCQ13952 458 aa9.38□□□□□ -0.91
TUBE1-210ENST00000604967 GABRA6Q16445 453 aa9.38□□□□□ -0.91
TUBE1-210ENST00000604967 NRF1Q16656 503 aa9.38□□□□□ -0.91
TUBE1-210ENST00000604967 METTL21CQ5VZV1 264 aa9.38□□□□□ -0.91
TUBE1-210ENST00000604967 REP15Q6BDI9 236 aa9.38□□□□□ -0.91
TUBE1-210ENST00000604967 TREML1Q86YW5 311 aa9.38□□□□□ -0.91
TUBE1-210ENST00000604967 ZNF100Q8IYN0 542 aa9.38□□□□□ -0.91
TUBE1-210ENST00000604967 CIARTQ8N365 385 aaPredicted RBP9.38□□□□□ -0.91
TUBE1-210ENST00000604967 HIPK4Q8NE63 616 aa9.38□□□□□ -0.91
TUBE1-210ENST00000604967 KBTBD8Q8NFY9 601 aa9.38□□□□□ -0.91
TUBE1-210ENST00000604967 OR6T1Q8NGN1 323 aa9.38□□□□□ -0.91
TUBE1-210ENST00000604967 OR10A6Q8NH74 314 aa9.38□□□□□ -0.91
TUBE1-210ENST00000604967 TSPEARQ8WU66 669 aa9.38□□□□□ -0.91
TUBE1-210ENST00000604967 SLC35B4Q969S0 331 aa9.38□□□□□ -0.91
TUBE1-210ENST00000604967 APH1AQ96BI3 265 aa9.38□□□□□ -0.91
TUBE1-210ENST00000604967 MOGAT1Q96PD6 335 aa9.38□□□□□ -0.91
TUBE1-210ENST00000604967 ARHGDIGQ99819 225 aa9.38□□□□□ -0.91
TUBE1-210ENST00000604967 TACO1Q9BSH4 297 aaKnown RBP9.38□□□□□ -0.91
TUBE1-210ENST00000604967 NELFAQ9H3P2 528 aa9.38□□□□□ -0.91
TUBE1-210ENST00000604967 RABEP2Q9H5N1 569 aa9.38□□□□□ -0.91
TUBE1-210ENST00000604967 ADPRHL2Q9NX46 363 aa9.38□□□□□ -0.91
TUBE1-210ENST00000604967 ARMCX1Q9P291 453 aa9.38□□□□□ -0.91
TUBE1-210ENST00000604967 KLHL14Q9P2G3 628 aa9.38□□□□□ -0.91
TUBE1-210ENST00000604967 ZNF232Q9UNY5 417 aa9.38□□□□□ -0.91
TUBE1-210ENST00000604967 SLC25A15Q9Y619 301 aa9.38□□□□□ -0.91
TUBE1-210ENST00000604967 OR5H1A6NKK0 313 aa9.37□□□□□ -0.91
TUBE1-210ENST00000604967 ANGPT2O15123 496 aa9.37□□□□□ -0.91
TUBE1-210ENST00000604967 UPK3AO75631 287 aa9.37□□□□□ -0.91
TUBE1-210ENST00000604967 LGI1O95970 557 aa9.37□□□□□ -0.91
TUBE1-210ENST00000604967 BGLAPP02818 100 aa9.37□□□□□ -0.91
TUBE1-210ENST00000604967 GPIP06744 558 aa9.37□□□□□ -0.91
TUBE1-210ENST00000604967 DANCRP0C864 163 aa9.37□□□□□ -0.91
TUBE1-210ENST00000604967 HLA-DOBP13765 273 aa9.37□□□□□ -0.91
TUBE1-210ENST00000604967 TNFRSF1BP20333 461 aa9.37□□□□□ -0.91
TUBE1-210ENST00000604967 CBLP22681 906 aa9.37□□□□□ -0.91
TUBE1-210ENST00000604967 PPIBP23284 216 aaKnown RBP9.37□□□□□ -0.91
TUBE1-210ENST00000604967 SLC6A2P23975 617 aa9.37□□□□□ -0.91
TUBE1-210ENST00000604967 FKBP2P26885 142 aaKnown RBP9.37□□□□□ -0.91
TUBE1-210ENST00000604967 PCGF2P35227 344 aa9.37□□□□□ -0.91
TUBE1-210ENST00000604967 MAP2K6P52564 334 aa9.37□□□□□ -0.91
TUBE1-210ENST00000604967 ARFIP2P53365 341 aa9.37□□□□□ -0.91
TUBE1-210ENST00000604967 CDH12P55289 794 aa9.37□□□□□ -0.91
TUBE1-210ENST00000604967 OR1Q1Q15612 314 aa9.37□□□□□ -0.91
TUBE1-210ENST00000604967 STK11Q15831 433 aa9.37□□□□□ -0.91
TUBE1-210ENST00000604967 PGGHGQ32M88 737 aa9.37□□□□□ -0.91
TUBE1-210ENST00000604967 TRMT5Q32P41 509 aaKnown RBP9.37□□□□□ -0.91
TUBE1-210ENST00000604967 CASP12Q6UXS9 341 aa9.37□□□□□ -0.91
TUBE1-210ENST00000604967 LINC00114Q6XXX2 140 aa9.37□□□□□ -0.91
TUBE1-210ENST00000604967 B3GLCTQ6Y288 498 aa9.37□□□□□ -0.91
TUBE1-210ENST00000604967 CREB3L2Q70SY1 520 aa9.37□□□□□ -0.91
TUBE1-210ENST00000604967 SNX32Q86XE0 403 aa9.37□□□□□ -0.91
TUBE1-210ENST00000604967 ARMC8Q8IUR7 673 aa9.37□□□□□ -0.91
TUBE1-210ENST00000604967 POU5F2Q8N7G0 328 aa9.37□□□□□ -0.91
TUBE1-210ENST00000604967 STK35Q8TDR2 534 aa9.37□□□□□ -0.91
TUBE1-210ENST00000604967 AKAP1Q92667 903 aaKnown RBP eCLIP9.37□□□□□ -0.91
TUBE1-210ENST00000604967 SLC38A4Q969I6 547 aa9.37□□□□□ -0.91
TUBE1-210ENST00000604967 TMEM45BQ96B21 275 aa9.37□□□□□ -0.91
TUBE1-210ENST00000604967 ZNF837Q96EG3 531 aaPredicted RBP9.37□□□□□ -0.91
TUBE1-210ENST00000604967 ZNF583Q96ND8 569 aa9.37□□□□□ -0.91
TUBE1-210ENST00000604967 MUS81Q96NY9 551 aa9.37□□□□□ -0.91
TUBE1-210ENST00000604967 SIKE1Q9BRV8 207 aa9.37□□□□□ -0.91
TUBE1-210ENST00000604967 C1QTNF6Q9BXI9 259 aa9.37□□□□□ -0.91
TUBE1-210ENST00000604967 HDHD5Q9BXW7 423 aa9.37□□□□□ -0.91
TUBE1-210ENST00000604967 TRIM2Q9C040 744 aa9.37□□□□□ -0.91
TUBE1-210ENST00000604967 EMC3Q9P0I2 261 aa9.37□□□□□ -0.91
TUBE1-210ENST00000604967 TRIM33Q9UPN9 1127 aa9.37□□□□□ -0.91
TUBE1-210ENST00000604967 DSCAMO60469 2012 aa9.37□□□□□ -0.91
TUBE1-210ENST00000604967 ALPK2Q86TB3 2170 aa9.37□□□□□ -0.91
TUBE1-210ENST00000604967 A0A087WUJ7 227 aa9.36□□□□□ -0.91
TUBE1-210ENST00000604967 UQCRHLA0A096LP55 91 aa9.36□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 56.3 ms