RNA–Protein interactions for RNA: ENST00000604743.5

TUBE1-208, Transcript of tubulin epsilon 1, humanhuman

TSL 3

Gene TUBE1, Length 959 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBE1-208ENST00000604743 APH1AQ96BI3 265 aa12.76□□□□□ -0.37
TUBE1-208ENST00000604743 KTI12Q96EK9 354 aaPredicted RBP12.76□□□□□ -0.37
TUBE1-208ENST00000604743 HDHD5Q9BXW7 423 aa12.76□□□□□ -0.37
TUBE1-208ENST00000604743 CCM2LQ9NUG4 571 aaPredicted RBP12.76□□□□□ -0.37
TUBE1-208ENST00000604743 TESQ9UGI8 421 aaKnown RBP12.76□□□□□ -0.37
TUBE1-208ENST00000604743 ROS1P08922 2347 aa12.76□□□□□ -0.37
TUBE1-208ENST00000604743 AIM2O14862 343 aa12.75□□□□□ -0.37
TUBE1-208ENST00000604743 SLC22A2O15244 555 aa12.75□□□□□ -0.37
TUBE1-208ENST00000604743 TPST2O60704 377 aa12.75□□□□□ -0.37
TUBE1-208ENST00000604743 CCDC22O60826 627 aa12.75□□□□□ -0.37
TUBE1-208ENST00000604743 NPPAP01160 153 aa12.75□□□□□ -0.37
TUBE1-208ENST00000604743 COX4I1P13073 169 aa12.75□□□□□ -0.37
TUBE1-208ENST00000604743 CBLP22681 906 aa12.75□□□□□ -0.37
TUBE1-208ENST00000604743 IGHV1-2P23083 117 aa12.75□□□□□ -0.37
TUBE1-208ENST00000604743 DNASE1P24855 282 aa12.75□□□□□ -0.37
TUBE1-208ENST00000604743 GTF2E2P29084 291 aaKnown RBP12.75□□□□□ -0.37
TUBE1-208ENST00000604743 NTF4P34130 210 aa12.75□□□□□ -0.37
TUBE1-208ENST00000604743 ART1P52961 327 aa12.75□□□□□ -0.37
TUBE1-208ENST00000604743 SLC16A1P53985 500 aa12.75□□□□□ -0.37
TUBE1-208ENST00000604743 EGR4Q05215 589 aa12.75□□□□□ -0.37
TUBE1-208ENST00000604743 SLC17A1Q14916 467 aa12.75□□□□□ -0.37
TUBE1-208ENST00000604743 P2RY6Q15077 328 aa12.75□□□□□ -0.37
TUBE1-208ENST00000604743 STK11Q15831 433 aa12.75□□□□□ -0.37
TUBE1-208ENST00000604743 ULK3Q6PHR2 472 aa12.75□□□□□ -0.37
TUBE1-208ENST00000604743 Q6ZT83 130 aa12.75□□□□□ -0.37
TUBE1-208ENST00000604743 LSMEM1Q8N8F7 131 aa12.75□□□□□ -0.37
TUBE1-208ENST00000604743 GPR32P1Q8NGA4 272 aa12.75□□□□□ -0.37
TUBE1-208ENST00000604743 RP9Q8TA86 221 aaKnown RBP12.75□□□□□ -0.37
TUBE1-208ENST00000604743 DNAJA4Q8WW22 397 aaPredicted RBP12.75□□□□□ -0.37
TUBE1-208ENST00000604743 TAMM41Q96BW9 452 aa12.75□□□□□ -0.37
TUBE1-208ENST00000604743 HS3ST6Q96QI5 342 aa12.75□□□□□ -0.37
TUBE1-208ENST00000604743 MCHR1Q99705 422 aa12.75□□□□□ -0.37
TUBE1-208ENST00000604743 PLEKHF2Q9H8W4 249 aa12.75□□□□□ -0.37
TUBE1-208ENST00000604743 EDARQ9UNE0 448 aa12.75□□□□□ -0.37
TUBE1-208ENST00000604743 FLVCR1Q9Y5Y0 555 aa12.75□□□□□ -0.37
TUBE1-208ENST00000604743 DSCAMO60469 2012 aa12.74□□□□□ -0.37
TUBE1-208ENST00000604743 AQP7P3A6NL99 342 aa12.74□□□□□ -0.37
TUBE1-208ENST00000604743 CCT8L1PA6NM43 557 aa12.74□□□□□ -0.37
TUBE1-208ENST00000604743 CPSF4LA6NMK7 179 aaKnown RBP12.74□□□□□ -0.37
TUBE1-208ENST00000604743 DYNC1I1O14576 645 aa12.74□□□□□ -0.37
TUBE1-208ENST00000604743 NPIPB7O75200 414 aa12.74□□□□□ -0.37
TUBE1-208ENST00000604743 LGI1O95970 557 aa12.74□□□□□ -0.37
TUBE1-208ENST00000604743 PNMTP11086 282 aa12.74□□□□□ -0.37
TUBE1-208ENST00000604743 FAPQ12884 760 aa12.74□□□□□ -0.37
TUBE1-208ENST00000604743 KEAP1Q14145 624 aa12.74□□□□□ -0.37
TUBE1-208ENST00000604743 FBXW9Q5XUX1 488 aa12.74□□□□□ -0.37
TUBE1-208ENST00000604743 CPLX4Q7Z7G2 160 aa12.74□□□□□ -0.37
TUBE1-208ENST00000604743 CALHM3Q86XJ0 350 aa12.74□□□□□ -0.37
TUBE1-208ENST00000604743 RBM45Q8IUH3 476 aaKnown RBP12.74□□□□□ -0.37
TUBE1-208ENST00000604743 KDM8Q8N371 416 aa12.74□□□□□ -0.37
TUBE1-208ENST00000604743 OR9K2Q8NGE7 335 aa12.74□□□□□ -0.37
TUBE1-208ENST00000604743 OR6T1Q8NGN1 323 aa12.74□□□□□ -0.37
TUBE1-208ENST00000604743 MFSD8Q8NHS3 518 aa12.74□□□□□ -0.37
TUBE1-208ENST00000604743 TAAR8Q969N4 342 aa12.74□□□□□ -0.37
TUBE1-208ENST00000604743 SLC47A1Q96FL8 570 aa12.74□□□□□ -0.37
TUBE1-208ENST00000604743 PLPPR2Q96GM1 343 aa12.74□□□□□ -0.37
TUBE1-208ENST00000604743 ZNF583Q96ND8 569 aa12.74□□□□□ -0.37
TUBE1-208ENST00000604743 ARHGDIGQ99819 225 aa12.74□□□□□ -0.37
TUBE1-208ENST00000604743 PTDSS2Q9BVG9 487 aa12.74□□□□□ -0.37
TUBE1-208ENST00000604743 NSRP1Q9H0G5 558 aaKnown RBP12.74□□□□□ -0.37
TUBE1-208ENST00000604743 OR10A4Q9H209 315 aa12.74□□□□□ -0.37
TUBE1-208ENST00000604743 UBTD1Q9HAC8 227 aa12.74□□□□□ -0.37
TUBE1-208ENST00000604743 C12orf10Q9HB07 376 aa12.74□□□□□ -0.37
TUBE1-208ENST00000604743 UPB1Q9UBR1 384 aa12.74□□□□□ -0.37
TUBE1-208ENST00000604743 SLC9A8Q9Y2E8 581 aa12.74□□□□□ -0.37
TUBE1-208ENST00000604743 PRRC2AP48634 2157 aaKnown RBP12.74□□□□□ -0.37
TUBE1-208ENST00000604743 HEATR1Q9H583 2144 aaKnown RBP12.73□□□□□ -0.37
TUBE1-208ENST00000604743 IGKV1D-42A0A075B6H8 117 aa12.73□□□□□ -0.37
TUBE1-208ENST00000604743 A0A0B4J2E0 115 aa12.73□□□□□ -0.37
TUBE1-208ENST00000604743 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP12.73□□□□□ -0.37
TUBE1-208ENST00000604743 A0A1B0GX12 115 aa12.73□□□□□ -0.37
TUBE1-208ENST00000604743 CIB4A0PJX0 185 aa12.73□□□□□ -0.37
TUBE1-208ENST00000604743 KLF4O43474 513 aa12.73□□□□□ -0.37
TUBE1-208ENST00000604743 RAD51DO75771 328 aa12.73□□□□□ -0.37
TUBE1-208ENST00000604743 RAF1P04049 648 aa12.73□□□□□ -0.37
TUBE1-208ENST00000604743 CD247P20963 164 aa12.73□□□□□ -0.37
TUBE1-208ENST00000604743 LSP1P33241 339 aa12.73□□□□□ -0.37
TUBE1-208ENST00000604743 CDH12P55289 794 aa12.73□□□□□ -0.37
TUBE1-208ENST00000604743 GNGT1P63211 74 aa12.73□□□□□ -0.37
TUBE1-208ENST00000604743 IL1RL1Q01638 556 aa12.73□□□□□ -0.37
TUBE1-208ENST00000604743 TAB1Q15750 504 aa12.73□□□□□ -0.37
TUBE1-208ENST00000604743 NPTX1Q15818 432 aa12.73□□□□□ -0.37
TUBE1-208ENST00000604743 NRF1Q16656 503 aa12.73□□□□□ -0.37
TUBE1-208ENST00000604743 BEX5Q5H9J7 111 aa12.73□□□□□ -0.37
TUBE1-208ENST00000604743 C9orf135Q5VTT2 229 aa12.73□□□□□ -0.37
TUBE1-208ENST00000604743 FAM91A1Q658Y4 838 aa12.73□□□□□ -0.37
TUBE1-208ENST00000604743 C6orf89Q6UWU4 347 aa12.73□□□□□ -0.37
TUBE1-208ENST00000604743 PAMR1Q6UXH9 720 aa12.73□□□□□ -0.37
TUBE1-208ENST00000604743 AAED1Q7RTV5 226 aa12.73□□□□□ -0.37
TUBE1-208ENST00000604743 TREML1Q86YW5 311 aa12.73□□□□□ -0.37
TUBE1-208ENST00000604743 OR4D11Q8NGI4 311 aa12.73□□□□□ -0.37
TUBE1-208ENST00000604743 SLC38A4Q969I6 547 aa12.73□□□□□ -0.37
TUBE1-208ENST00000604743 ZNF385AQ96PM9 386 aaKnown RBP12.73□□□□□ -0.37
TUBE1-208ENST00000604743 EVA1AQ9H8M9 152 aa12.73□□□□□ -0.37
TUBE1-208ENST00000604743 PARPBPQ9NWS1 579 aa12.73□□□□□ -0.37
TUBE1-208ENST00000604743 SEC14L4Q9UDX3 406 aa12.73□□□□□ -0.37
TUBE1-208ENST00000604743 MAP1AP78559 2803 aaPredicted RBP12.73□□□□□ -0.37
TUBE1-208ENST00000604743 TRAV36DV7A0A075B6V5 113 aa12.72□□□□□ -0.37
TUBE1-208ENST00000604743 A0A087WUJ7 227 aa12.72□□□□□ -0.37
TUBE1-208ENST00000604743 GMNCA6NCL1 334 aa12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 87 ms